Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0525100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:20392485:20395761:-1 gene:Os07g0525100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCOLE1-INTERACTING PROTEIN description:Putative integral membrane protein containing EamA-like transporter family domains, Regulation of intracellular auxin transport (Os07t0525100-01)
Sequence	ATGAGTAGTGGCGGCGCTAAGGCCTATGCGGCCGTTGTTCTGATCAGGATCATGTACTCT GGTATGCATGTGATGAGCAAGATCGCCTTGGATCAAGGCATGAACCCCTTGGTGTTTCTG TTCTATCGGCATACCACTGCTGCACTCGTGCTGATCCCTATTACTTTTGTTCTAGAGAGG CGGAAAGCTAAACCGGTGACGTTAAAAATTGCAGGGAAAATGTTTGTACATGCCTTATAT GGGGTGACAGCTTGTGGCGACTTATTTAACCTTGGTCTCAATTATACTTCGGCAGCATCA TCATCAGCATTGTACAACGTTCAACCAGTGGTTACCTTTGTCCTTGCTGTTGTATTTGGG ATGGAGTCTATGAAACTGAAGAAGTTCCATGGAAATGTAAAAGCGGCAGGTATTCTGTTC TGCATCGCCGGTGTCACAATTTTGGCCTTCTACGAGGGGCCAATGTTCAAATCGTTCAAC CATCACCACCTCTTTCAGCAAGGCAGCAGCAGCAGCACTTCTTCTTCAGGAGATACCCAT TCCAAGAAGCAATGGGCATTTGGAATCTTCCTCATGACACTCTCTAACATTTTAGCAGGC CTATGGACAGTTCTCCAGGGTCCACTGATAGAAGACACTTCCAAGTTGATGAACACCACG CTGCAGATCTGTTGCGCATCAGTCCAAGCTTTCGTTGTGGCTGTTGCAGCCGAGAGGGAC TTCTCCAAGTGGAAGCTAGGATGGAATGTCGAGCTTGGTGCAGTAATCTACAGTGGTGTG GTCGTCACCGCACTATCGTACTACATGCAAATGTGGACGATTGCGAAGAGGGGCCCGGTG TTCCTTGCCATGTCGATGCCGCTTACTTTCATATTCACAATTATCATGTCCTCATTCATT TTAGGGGATGCAGTTAGCCTAGGAAGTATTTTTGCTGGGATACTACTGATCGGAGGCTTG TACAATGTTCTGTGGGGGAAAAACATAGAGGAGAAGGACGAGATGAACAAGATTGGTGCA AGCAAAACCGGCCTGGAGCTGGAGCTGCATGACAGCGAGGCTCAAGTGCCTGATGATGAT GCAGCAAAGGTCTAA

Peptide Sequence

PEP ID	Os07t0525100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:20392485:20395761:-1 gene:Os07g0525100 transcript:Os07t0525100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCOLE1-INTERACTING PROTEIN description:Putative integral membrane protein containing EamA-like transporter family domains, Regulation of intracellular auxin transport (Os07t0525100-01)
Sequence	MSSGGAKAYAAVVLIRIMYSGMHVMSKIALDQGMNPLVFLFYRHTTAALVLIPITFVLER RKAKPVTLKIAGKMFVHALYGVTACGDLFNLGLNYTSAASSSALYNVQPVVTFVLAVVFG MESMKLKKFHGNVKAAGILFCIAGVTILAFYEGPMFKSFNHHHLFQQGSSSSTSSSGDTH SKKQWAFGIFLMTLSNILAGLWTVLQGPLIEDTSKLMNTTLQICCASVQAFVVAVAAERD FSKWKLGWNVELGAVIYSGVVVTALSYYMQMWTIAKRGPVFLAMSMPLTFIFTIIMSSFI LGDAVSLGSIFAGILLIGGLYNVLWGKNIEEKDEMNKIGASKTGLELELHDSEAQVPDDD AAKV

Transcript Sequence

Transcript ID	Os07t0525100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:20392485:20395761:-1 gene:Os07g0525100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCOLE1-INTERACTING PROTEIN description:Putative integral membrane protein containing EamA-like transporter family domains, Regulation of intracellular auxin transport (Os07t0525100-01)
Sequence	AAGATTCAGATAGTTAAGTTCAGAGAGACTCTCAGAGTTGCAGCAACTAACTCATCAAGA AACTCAAAGATGAGTAGTGGCGGCGCTAAGGCCTATGCGGCCGTTGTTCTGATCAGGATC ATGTACTCTGGTATGCATGTGATGAGCAAGATCGCCTTGGATCAAGGCATGAACCCCTTG GTGTTTCTGTTCTATCGGCATACCACTGCTGCACTCGTGCTGATCCCTATTACTTTTGTT CTAGAGAGGCGGAAAGCTAAACCGGTGACGTTAAAAATTGCAGGGAAAATGTTTGTACAT GCCTTATATGGGGTGACAGCTTGTGGCGACTTATTTAACCTTGGTCTCAATTATACTTCG GCAGCATCATCATCAGCATTGTACAACGTTCAACCAGTGGTTACCTTTGTCCTTGCTGTT GTATTTGGGATGGAGTCTATGAAACTGAAGAAGTTCCATGGAAATGTAAAAGCGGCAGGT ATTCTGTTCTGCATCGCCGGTGTCACAATTTTGGCCTTCTACGAGGGGCCAATGTTCAAA TCGTTCAACCATCACCACCTCTTTCAGCAAGGCAGCAGCAGCAGCACTTCTTCTTCAGGA GATACCCATTCCAAGAAGCAATGGGCATTTGGAATCTTCCTCATGACACTCTCTAACATT TTAGCAGGCCTATGGACAGTTCTCCAGGGTCCACTGATAGAAGACACTTCCAAGTTGATG AACACCACGCTGCAGATCTGTTGCGCATCAGTCCAAGCTTTCGTTGTGGCTGTTGCAGCC GAGAGGGACTTCTCCAAGTGGAAGCTAGGATGGAATGTCGAGCTTGGTGCAGTAATCTAC AGTGGTGTGGTCGTCACCGCACTATCGTACTACATGCAAATGTGGACGATTGCGAAGAGG GGCCCGGTGTTCCTTGCCATGTCGATGCCGCTTACTTTCATATTCACAATTATCATGTCC TCATTCATTTTAGGGGATGCAGTTAGCCTAGGAAGTATTTTTGCTGGGATACTACTGATC GGAGGCTTGTACAATGTTCTGTGGGGGAAAAACATAGAGGAGAAGGACGAGATGAACAAG ATTGGTGCAAGCAAAACCGGCCTGGAGCTGGAGCTGCATGACAGCGAGGCTCAAGTGCCT GATGATGATGCAGCAAAGGTCTAAAACCAAAATTAAAACGATGTGACAGAAAAGATCTGT CATCAAACCAAAGCTGCTGTTTTGCTTATGCATGCCTCCAGATTGTCGAGGCCGACGTGT GCACACAGATCTCTTTACTCCTCCTCACCGGTGAACTGGTGGCTGCAATTTATCCAAGAT AGCAATTGGGTGCTCTCTGATCCACGTAGTGTGTGATCTCTGCTTTTTCTGGCACCATGT TTCCTTTCCAGTAGTACTACTGCTCCTCCTACTGTTGTTGTTTCTGATTAGTGAATAAAT TAAGTTCAAGTTGCGGTC