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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0524400-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:20351018:20351590:1 gene:Os07g0524400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to harpin-induced protein. (Os07t0524400-00)
Sequence

ATGGCCGCCAGGAGGAAGCCCGCGCTGATCTGCTGCGGCGCGGCGCTCGCCGCCGCCGTC
GTCCTCGCCGCCGTCTTCACCGCGCTCTACTTCACCGTGCTCCGGCCGCGGCCGCCGCGG
GTGACGGCGACGGTCGTCGGCACGCGCGTCTCCGCCTTCGCCCTCATCCCGTCGCCGGCG
CTGAACCTGACCTTCGACGTGGCCGTGGCGGCGTACAACCCGAACCGCGCGGCGTTCGAG
TATGGCGAGGTGGTGACGGTGGTGCGGTACCACGGCGACGCGGTGGGGGAGGCGGTGGTG
CCGCGCGGGGAGGTCGGGGCGCGGGCGTCGGCGGAGGTGAGGGCGGCGGTGGAGGTGGAC
GCCGTGGAGGTGTTCTCGTCGCCGTACTTCCCCCTGGAGGGGATCGCCGGGGCGCTGCCG
TTCGAGACGGCGACGACGGTGGCGGGGAAGGCGGTGGTGCTGGGCGTGCTCAAGATCAGG
GCGAGCTCCGTGGTGACGTGCGGCGTCACGGTGTTCCCGCTCAGGAAGGAGACCACGTCG
CCCCAGTGCACCTCCACCGTCCACGTGGGCTGA

Peptide Sequence

PEP ID

Os07t0524400-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:20351018:20351590:1 gene:Os07g0524400 transcript:Os07t0524400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to harpin-induced protein. (Os07t0524400-00)
Sequence

MAARRKPALICCGAALAAAVVLAAVFTALYFTVLRPRPPRVTATVVGTRVSAFALIPSPA
LNLTFDVAVAAYNPNRAAFEYGEVVTVVRYHGDAVGEAVVPRGEVGARASAEVRAAVEVD
AVEVFSSPYFPLEGIAGALPFETATTVAGKAVVLGVLKIRASSVVTCGVTVFPLRKETTS
PQCTSTVHVG

Transcript Sequence

Transcript ID

Os07t0524400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:20351018:20351590:1 gene:Os07g0524400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to harpin-induced protein. (Os07t0524400-00)
Sequence

ATGGCCGCCAGGAGGAAGCCCGCGCTGATCTGCTGCGGCGCGGCGCTCGCCGCCGCCGTC
GTCCTCGCCGCCGTCTTCACCGCGCTCTACTTCACCGTGCTCCGGCCGCGGCCGCCGCGG
GTGACGGCGACGGTCGTCGGCACGCGCGTCTCCGCCTTCGCCCTCATCCCGTCGCCGGCG
CTGAACCTGACCTTCGACGTGGCCGTGGCGGCGTACAACCCGAACCGCGCGGCGTTCGAG
TATGGCGAGGTGGTGACGGTGGTGCGGTACCACGGCGACGCGGTGGGGGAGGCGGTGGTG
CCGCGCGGGGAGGTCGGGGCGCGGGCGTCGGCGGAGGTGAGGGCGGCGGTGGAGGTGGAC
GCCGTGGAGGTGTTCTCGTCGCCGTACTTCCCCCTGGAGGGGATCGCCGGGGCGCTGCCG
TTCGAGACGGCGACGACGGTGGCGGGGAAGGCGGTGGTGCTGGGCGTGCTCAAGATCAGG
GCGAGCTCCGTGGTGACGTGCGGCGTCACGGTGTTCCCGCTCAGGAAGGAGACCACGTCG
CCCCAGTGCACCTCCACCGTCCACGTGGGCTGA