Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0519100-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:20045846:20049071:1 gene:Os07g0519100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to taxane 10-beta-hydroxylase. (Os07t0519100-01)
Sequence

ATGGATTCATCCATGCCTTTTGCTCTGCTGCTTGCCTTGCTCATACCCATCCTCCTCCAC
TTTGTCATCAGGCGCAAGTACTCATCCTATAATCTCCCTCCAGGTTCCCTTGGCTTCCCA
GTGATTGGCCAGAGCATCTCCCTACTTCGCGCCCTCCGCAGTAATACTGATTACCAGTGG
TACCAGGACAGGATCAAGAAGTATGGTCCAGTGTCCAAGATGTCAGTGTTTGGCTCACCG
ACGGTGCTGTTGACTGGCCCAGCAGCCAATCGCTTTGTATTCAGCAACCAAGACCTCATT
ATCACCGAGACGAAGGCAGCGAACGCCCTCATTGGGCGGTCCATATTGACACTATCAGGT
GAGGAGCTAAAGCAAGTCCGCAGTGCACTGCAGGGCTATCTGAGGACAGAGATGGTGACA
AAGTGTATTCGGAAGATGGATGAGGAGGTCAGGAGGCACATCGACCTGAATTGGGTTGGT
CAAAAGACAGTCACGGTTGCACCATTGGCGAAGAGGCTCACCTTTGACATCATCTGCTCA
GTCATCTTCGGACAGGGGGCAGGTCCCATCAGGGAAGCCCTTGCTGCTGACTTCAAGAAA
ATGGTGCAGGCAATGCTATCGATTCCAGTGAATATACCCTTCACCAAGTTCAACAAGGGC
TTGAGTGCGAGCCGGAGGGTGAGGAAGGTGCTCAGGCAAATTGCTCGTGACAGGGAAGCA
GCATTGCAGCAAGGCCATTCTAGTTCAGCTGATGATTTCTTCACATACATGCTTGTTTTG
CGCTCCGAAGGCACCCACTCACTCACAGTGGAGGACATTGTGGACAATGCAATCTTACTC
CTACTTGCTGGTTATGAGACATCGTCTGTTCTTATCACCTTCTTGCTCCGGTACCTAGCC
AATGAGCCAGATATCCTGGGCAAGATAACTGAAGAACAAGAGGAGATCGCTAGGTACAAA
GGACCTGATGAACCTTTGACCTGGGATGATGTTTCAAGGATGAAGTACACGTGGAAGGTG
GCAATGGAGACACTACAGACTGTTCCCCCAATATTTGGAAGCCTCCGAACAGCTATTAAA
GACATCGAATACCAGGGCTATCACATTCCAAAAGGCTGGCAAGTCTTCACTGCTATAATT
ATCACACATTTGGACGCAAATTTTTCCGATGACCCGAACAAGTTCAACCCTGCTAGATTT
CATAACCAGTCTTCAGTCCCACCCTATTGCTTTGTTCCGTTTGGGGGAGGTCCAAGAATG
TGCCCTGGAAATGAATTTGCGAGGACCGAGACATTGGTAGCCATGCACTATCTGGTGAGG
CAGTTCAGGTGGAAATTGTGCTGCAAAGATGAAGGTTACAGGAAAGATCCTGTTCCGATG
CCTCTTGAACTCCCAATTGAACTTGAGACCAGAAGCTCCCCCTGGATATGCTTAAAATGA

Peptide Sequence

PEP ID

Os07t0519100-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:20045846:20049071:1 gene:Os07g0519100 transcript:Os07t0519100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to taxane 10-beta-hydroxylase. (Os07t0519100-01)
Sequence

MDSSMPFALLLALLIPILLHFVIRRKYSSYNLPPGSLGFPVIGQSISLLRALRSNTDYQW
YQDRIKKYGPVSKMSVFGSPTVLLTGPAANRFVFSNQDLIITETKAANALIGRSILTLSG
EELKQVRSALQGYLRTEMVTKCIRKMDEEVRRHIDLNWVGQKTVTVAPLAKRLTFDIICS
VIFGQGAGPIREALAADFKKMVQAMLSIPVNIPFTKFNKGLSASRRVRKVLRQIARDREA
ALQQGHSSSADDFFTYMLVLRSEGTHSLTVEDIVDNAILLLLAGYETSSVLITFLLRYLA
NEPDILGKITEEQEEIARYKGPDEPLTWDDVSRMKYTWKVAMETLQTVPPIFGSLRTAIK
DIEYQGYHIPKGWQVFTAIIITHLDANFSDDPNKFNPARFHNQSSVPPYCFVPFGGGPRM
CPGNEFARTETLVAMHYLVRQFRWKLCCKDEGYRKDPVPMPLELPIELETRSSPWICLK

Transcript Sequence

Transcript ID

Os07t0519100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:20045846:20049071:1 gene:Os07g0519100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to taxane 10-beta-hydroxylase. (Os07t0519100-01)
Sequence

ACCCAACCTTCATAGTGCATAACAACATACCATATCAATGGATTCATCCATGCCTTTTGC
TCTGCTGCTTGCCTTGCTCATACCCATCCTCCTCCACTTTGTCATCAGGCGCAAGTACTC
ATCCTATAATCTCCCTCCAGGTTCCCTTGGCTTCCCAGTGATTGGCCAGAGCATCTCCCT
ACTTCGCGCCCTCCGCAGTAATACTGATTACCAGTGGTACCAGGACAGGATCAAGAAGTA
TGGTCCAGTGTCCAAGATGTCAGTGTTTGGCTCACCGACGGTGCTGTTGACTGGCCCAGC
AGCCAATCGCTTTGTATTCAGCAACCAAGACCTCATTATCACCGAGACGAAGGCAGCGAA
CGCCCTCATTGGGCGGTCCATATTGACACTATCAGGTGAGGAGCTAAAGCAAGTCCGCAG
TGCACTGCAGGGCTATCTGAGGACAGAGATGGTGACAAAGTGTATTCGGAAGATGGATGA
GGAGGTCAGGAGGCACATCGACCTGAATTGGGTTGGTCAAAAGACAGTCACGGTTGCACC
ATTGGCGAAGAGGCTCACCTTTGACATCATCTGCTCAGTCATCTTCGGACAGGGGGCAGG
TCCCATCAGGGAAGCCCTTGCTGCTGACTTCAAGAAAATGGTGCAGGCAATGCTATCGAT
TCCAGTGAATATACCCTTCACCAAGTTCAACAAGGGCTTGAGTGCGAGCCGGAGGGTGAG
GAAGGTGCTCAGGCAAATTGCTCGTGACAGGGAAGCAGCATTGCAGCAAGGCCATTCTAG
TTCAGCTGATGATTTCTTCACATACATGCTTGTTTTGCGCTCCGAAGGCACCCACTCACT
CACAGTGGAGGACATTGTGGACAATGCAATCTTACTCCTACTTGCTGGTTATGAGACATC
GTCTGTTCTTATCACCTTCTTGCTCCGGTACCTAGCCAATGAGCCAGATATCCTGGGCAA
GATAACTGAAGAACAAGAGGAGATCGCTAGGTACAAAGGACCTGATGAACCTTTGACCTG
GGATGATGTTTCAAGGATGAAGTACACGTGGAAGGTGGCAATGGAGACACTACAGACTGT
TCCCCCAATATTTGGAAGCCTCCGAACAGCTATTAAAGACATCGAATACCAGGGCTATCA
CATTCCAAAAGGCTGGCAAGTCTTCACTGCTATAATTATCACACATTTGGACGCAAATTT
TTCCGATGACCCGAACAAGTTCAACCCTGCTAGATTTCATAACCAGTCTTCAGTCCCACC
CTATTGCTTTGTTCCGTTTGGGGGAGGTCCAAGAATGTGCCCTGGAAATGAATTTGCGAG
GACCGAGACATTGGTAGCCATGCACTATCTGGTGAGGCAGTTCAGGTGGAAATTGTGCTG
CAAAGATGAAGGTTACAGGAAAGATCCTGTTCCGATGCCTCTTGAACTCCCAATTGAACT
TGAGACCAGAAGCTCCCCCTGGATATGCTTAAAATGATCCACCTGTTTTTAGTTTATGCT
TTCACTAGTTGGTTGAAGAGTTGGAAATGTTGCAGTTGTGAAGATCTTGGTAAAGTTGTT
CAGAAATGCAGTGACTTATGATCAAAGCTTTGGTTCAGTTGCGCAGATAAATGTGTAATA
TTCCCTCTGTTATTTAATAGATAACGGCGTTGACTTTTGAACACATGTTTGACCATTCGT
CTTATTCTAAAAATTTATGTAAATGTATAGAATATAAATCATGCTTAAAGTATTTTGAGT
GATAAAACATCTCACAACAAAATAAATAATAATTATGTTTTTTTAATAAGACGAATGGTC
AAATGTTCAACGGCATCATCTATTAAGAAACAGAGTTAGTAAGACATCTGCTTAGGGGGT
TCCTTTTCTTTTGTTTTTCTGAAAACAATGTCTACGTTGTGCTATTGTTGGGTAAATCAG
CCAGCTGTTTACTTTATTTGGATGCAATGAACAAAAAAAGGATAATTTAAAATTACCATT
AGAAAATGCAATACTCTAAACACAATCGCCATGTACTAGCAAACAAAATACTTGTCATTT
GTCTCAGAATTTGCTATCGATGATTGTATCGCTAGCAGAGGTAAGTCCTTTTCCTTTGCT
TTTTTTTTTTTCATTCACAGTGGAGGACAATGTTTAGTTGTCACAGTGTATTACTCTATT
CCCTAAATGATTATAAATATTTGATGTTTAGGATAAGATTTAGTCAAAGTTTTGAAAATT
CGAGAAAAAAGTCTATAGTGCTAGGGAACAAAGTCTATCAACCAAAGAAAAAAAAGGGTC
TATGGGTTATTAGTCTCATAATTCTCTTTCTTATAAAGAATTTGCACAAATTTTATAATA
TTGTAGTGACAAAGTCCCTGTGTGAGGTATGTGGGTTCTTTCTGGTGGTAAAATATGTTT
TAAAAATTTTAAAAAACTTTTTCAGAGGTATTGCCAAGTGAAATGTCAAGGATGGTAAAA
CATGCTTATTTTTTGCATCTCAGGACATTGATTTAACTTATATAAGATGCAAGAGAGACT
TTCATGCATATTTTCTTTGAATGTCACTTTAGCCAAGAATGTTTGGTCAAGGCTGCTTAT
CATGTGGAACACAAGCCTAAGCTTTGAGCAGATGTTGCAGTCGGCTATGGATAATTGCAA
TGCCAGGGTTTAAACTTTGTGGAAAAAGTTCTATATGCTTCCCGAAATATTTGGAAAACA
GAGGAATGACTTCATTTTGAAGATAAAGCACCTTGCCACCTTTTGTACATCCCTGGAGTT
GCCTTTTAAAGGATGATCTACTTTTACTTTTCTTTCTTTTAAGTCATGTATAAAGAGATA
TTCTATCATCATGGATTGACTTGTTG