Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0518500-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:20012766:20015490:1 gene:Os07g0518500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to taxane 10-beta-hydroxylase. (Os07t0518500-01);Cytochrome P450 family protein. (Os07t0518500-02);Similar to taxane 10-beta-hydroxylase. (Os07t0518500-03);Similar to cDNA clone:J013020I02, full insert sequence. (Os07t0518500-04)
Sequence

ATGGATTCATCCATTCTTCCTGCTCTGCTGATTGCCCTGTTCATACCCATCCTCCTCCAC
CTTGTCACCCGATTCAAGTACTCATCCTACAATCTCCCTCCAGGCTCACTTGGCTTCCCA
TTCGTTGGCCAGAGCATCTCCTTCCTCCGGGCCCTTCGCAGTAACACTGATCACCAATGG
TACCAAGGCAGGATCGGCAAGTATGGTCCTGTGTCCAAGATGTGGCTGTTTGGCTCACCT
GCAGTCCTGATGGCCGGACCTGCAGCCAACCGCTTCATATTCAGCAACAAGGACCTGCTC
TTCACGGGGACAAGGTCGATGAACCTCCTTAGCGGCCGGAATATACTGATGCTCTCAGGC
GAGGAGCTGAAGCAAGTCCGTGGCGCACTGCAGAATTTCTTAAGCCCAGAAATGGTAATC
AGGTATGTCTCTAAGATGGATGAGGAAGTCAGGAGGCATGTTAAGGTGAATTGGGTTGGA
CACAAGACTGTCAAGGTTCTTCCTTTGGCAAAGAGGCTCACATTGGACATCATCTGCTCG
GTCATCTTCGGACAAGAGGCAGGTTCTGTCAGAGAAGCCCTTGCCACCGACTTCCCGGCG
ATGGTGAGGGCTGCGCTGTCGATTCCAGTGAAGATACCTTTCACCAGGTTCAGCAGGGGC
CTGAGTGCGAGCCAAAGGATCAGGAAGTTGCTCAGGGGGATCGCTCGTGAGAGAGAGACG
CTCTTGCAGCAGCAGCAGGCTCATGGCGCTTCAGCAGCTGACGATTTCTTCACATACATG
CTCGCCTTGCGTGCTGAAGGTGCGCACTCGCTCACGGTCGAGGACATCGTGGACAACGCG
ATCTTCCTTCTGATCGCAGGCTATGAGACGACATCTGTTCTAATCACATTCATGCTCTGG
CACCTGGACAAGGAGCCAGAAGTCCTTTCCAAGATAACTGAGGAGCAAGATGAGATTGCC
AGGAACAAGGGACCTGAGGATGCTCTAACCTGGGATGATGTTTCAAGGATGAAGTACACA
TGGAAGGTGGCAATGGAGACAGTGCGAACAATCCCTCCAATTTTTGGGAGCTTCAGAACA
GCTACCAGAGACATCGAATACCAGGGCTATCACATTCCAAAAGGTTGGATGGTATTCACA
GCCCAATCTGTTACACATTTGGATGCAAATATTTTCCCTGAGCCAAGCAATTTCGACCCT
GCTCGATTCGAGAACAACTCTTCGATTCCTCCTTATTGCTTTGTGCCATTTGGGGGAGGT
CCAAGAATGTGTCCTGGAAACGAGTTTGCAAGGACTGAGACATTGGTGACCATGCACTCC
TTGGTGACACAGTTCAGGTGGAAGCTGTGCTGCAAGGAAGAAAGCTACAAGAAAGATCCG
TCTCCGACGCCTCTTCTTGGACTCCCAGTTGAACTGGAGCCGAGATGCCTCCCTGAAAAT
GCTCATGCTTAA

Peptide Sequence

PEP ID

Os07t0518500-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:20012766:20015490:1 gene:Os07g0518500 transcript:Os07t0518500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to taxane 10-beta-hydroxylase. (Os07t0518500-01);Cytochrome P450 family protein. (Os07t0518500-02);Similar to taxane 10-beta-hydroxylase. (Os07t0518500-03);Similar to cDNA clone:J013020I02, full insert sequence. (Os07t0518500-04)
Sequence

MDSSILPALLIALFIPILLHLVTRFKYSSYNLPPGSLGFPFVGQSISFLRALRSNTDHQW
YQGRIGKYGPVSKMWLFGSPAVLMAGPAANRFIFSNKDLLFTGTRSMNLLSGRNILMLSG
EELKQVRGALQNFLSPEMVIRYVSKMDEEVRRHVKVNWVGHKTVKVLPLAKRLTLDIICS
VIFGQEAGSVREALATDFPAMVRAALSIPVKIPFTRFSRGLSASQRIRKLLRGIARERET
LLQQQQAHGASAADDFFTYMLALRAEGAHSLTVEDIVDNAIFLLIAGYETTSVLITFMLW
HLDKEPEVLSKITEEQDEIARNKGPEDALTWDDVSRMKYTWKVAMETVRTIPPIFGSFRT
ATRDIEYQGYHIPKGWMVFTAQSVTHLDANIFPEPSNFDPARFENNSSIPPYCFVPFGGG
PRMCPGNEFARTETLVTMHSLVTQFRWKLCCKEESYKKDPSPTPLLGLPVELEPRCLPEN
AHA

Transcript Sequence

Transcript ID

Os07t0518500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:20012766:20015490:1 gene:Os07g0518500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to taxane 10-beta-hydroxylase. (Os07t0518500-01);Cytochrome P450 family protein. (Os07t0518500-02);Similar to taxane 10-beta-hydroxylase. (Os07t0518500-03);Similar to cDNA clone:J013020I02, full insert sequence. (Os07t0518500-04)
Sequence

ATTACCACATACCATACCTATGGATTCATCCATTCTTCCTGCTCTGCTGATTGCCCTGTT
CATACCCATCCTCCTCCACCTTGTCACCCGATTCAAGTACTCATCCTACAATCTCCCTCC
AGGCTCACTTGGCTTCCCATTCGTTGGCCAGAGCATCTCCTTCCTCCGGGCCCTTCGCAG
TAACACTGATCACCAATGGTACCAAGGCAGGATCGGCAAGTATGGTCCTGTGTCCAAGAT
GTGGCTGTTTGGCTCACCTGCAGTCCTGATGGCCGGACCTGCAGCCAACCGCTTCATATT
CAGCAACAAGGACCTGCTCTTCACGGGGACAAGGTCGATGAACCTCCTTAGCGGCCGGAA
TATACTGATGCTCTCAGGCGAGGAGCTGAAGCAAGTCCGTGGCGCACTGCAGAATTTCTT
AAGCCCAGAAATGGTAATCAGGTATGTCTCTAAGATGGATGAGGAAGTCAGGAGGCATGT
TAAGGTGAATTGGGTTGGACACAAGACTGTCAAGGTTCTTCCTTTGGCAAAGAGGCTCAC
ATTGGACATCATCTGCTCGGTCATCTTCGGACAAGAGGCAGGTTCTGTCAGAGAAGCCCT
TGCCACCGACTTCCCGGCGATGGTGAGGGCTGCGCTGTCGATTCCAGTGAAGATACCTTT
CACCAGGTTCAGCAGGGGCCTGAGTGCGAGCCAAAGGATCAGGAAGTTGCTCAGGGGGAT
CGCTCGTGAGAGAGAGACGCTCTTGCAGCAGCAGCAGGCTCATGGCGCTTCAGCAGCTGA
CGATTTCTTCACATACATGCTCGCCTTGCGTGCTGAAGGTGCGCACTCGCTCACGGTCGA
GGACATCGTGGACAACGCGATCTTCCTTCTGATCGCAGGCTATGAGACGACATCTGTTCT
AATCACATTCATGCTCTGGCACCTGGACAAGGAGCCAGAAGTCCTTTCCAAGATAACTGA
GGAGCAAGATGAGATTGCCAGGAACAAGGGACCTGAGGATGCTCTAACCTGGGATGATGT
TTCAAGGATGAAGTACACATGGAAGGTGGCAATGGAGACAGTGCGAACAATCCCTCCAAT
TTTTGGGAGCTTCAGAACAGCTACCAGAGACATCGAATACCAGGGCTATCACATTCCAAA
AGGTTGGATGGTATTCACAGCCCAATCTGTTACACATTTGGATGCAAATATTTTCCCTGA
GCCAAGCAATTTCGACCCTGCTCGATTCGAGAACAACTCTTCGATTCCTCCTTATTGCTT
TGTGCCATTTGGGGGAGGTCCAAGAATGTGTCCTGGAAACGAGTTTGCAAGGACTGAGAC
ATTGGTGACCATGCACTCCTTGGTGACACAGTTCAGGTGGAAGCTGTGCTGCAAGGAAGA
AAGCTACAAGAAAGATCCGTCTCCGACGCCTCTTCTTGGACTCCCAGTTGAACTGGAGCC
GAGATGCCTCCCTGAAAATGCTCATGCTTAAAAATTGCTTCATGTCCGTGCATTTTGAGT
TTATGCTATTTGCAGTTAGCCAGAGAGAATCATGGAGTAATGCAGTACAAATCCAAGAAC
TGACAAGAATTCAAGTCCAAATTCAATCCTTAGATTGAGAAAAACAAAAGCAAATCTATA
TGAACAATATAGACACTATCTATATTCGGATTCTCCAACTTTTGTTATACATATGTAGAT
TAAATTTAAACTGGCGTGTTCGAGGGGTATGAATAATGTTATGATCTACGGTGTTGGCAC
TTTTC