Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0517100-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:19935550:19936420:1 gene:Os07g0517100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP18.8 description:Heat shock protein Hsp20 domain containing protein. (Os07t0517100-01);Heat shock protein Hsp20 domain containing protein. (Os07t0517100-02);Similar to 18.8 kDa class V heat shock protein. (Os07t0517100-03)
Sequence	ATGGATTATTACTACCCCATGGAGGAGGAGGAGGAGGTGCACGAGCGCCCAAGATTCCGG CGCCCGGTCCACCCGTGGCAGTGGCACCATTGGCAGAATCTCCTCGGCCTCCTCTCGTCG TCGTCTCCGTCTCCGGCGACGGCGGCGGCGGCGCAGAGGTGCAGCCATGTCAGCTGGGAG GAGACCGCCGCCGCGCACCTCTACTCCGCCAGCCTCCCCGGTGTGAGGAAGGAGGAGATC AGGGTGGAGGTGGAGGACGCGATGTACCTCGTCATCCGCACCGAGCTTGATGACGGTGGC GATGGCGACGGCGGAGGCGGCGGTGGCCGGAGGAGCTTCGCGAGGAAGTTCCGGCTGCCG GCGATGGTGGACGCCGACGGCATCTCGGCGGAGTACACCCACGGCGTGCTCAGGGTAACC GTCCCGAGGCTGCATACGCGGGCTCGCCCCGTCGTCAACCTCGCCGGCGGCGGCGGCGGT GGCGGTGGCCCGGCCTGCGACCCCGTCGCCCGAGCAGCCTGA

Peptide Sequence

PEP ID	Os07t0517100-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:19935550:19936420:1 gene:Os07g0517100 transcript:Os07t0517100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP18.8 description:Heat shock protein Hsp20 domain containing protein. (Os07t0517100-01);Heat shock protein Hsp20 domain containing protein. (Os07t0517100-02);Similar to 18.8 kDa class V heat shock protein. (Os07t0517100-03)
Sequence	MDYYYPMEEEEEVHERPRFRRPVHPWQWHHWQNLLGLLSSSSPSPATAAAAQRCSHVSWE ETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFARKFRLP AMVDADGISAEYTHGVLRVTVPRLHTRARPVVNLAGGGGGGGGPACDPVARAA

Transcript Sequence

Transcript ID	Os07t0517100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:19935550:19936420:1 gene:Os07g0517100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP18.8 description:Heat shock protein Hsp20 domain containing protein. (Os07t0517100-01);Heat shock protein Hsp20 domain containing protein. (Os07t0517100-02);Similar to 18.8 kDa class V heat shock protein. (Os07t0517100-03)
Sequence	GGACGCCGGCCGGAGAATCCGCCTGCCATGGATTATTACTACCCCATGGAGGAGGAGGAG GAGGTGCACGAGCGCCCAAGATTCCGGCGCCCGGTCCACCCGTGGCAGTGGCACCATTGG CAGAATCTCCTCGGCCTCCTCTCGTCGTCGTCTCCGTCTCCGGCGACGGCGGCGGCGGCG CAGAGGTGCAGCCATGTCAGCTGGGAGGAGACCGCCGCCGCGCACCTCTACTCCGCCAGC CTCCCCGGTGTGAGGAAGGAGGAGATCAGGGTGGAGGTGGAGGACGCGATGTACCTCGTC ATCCGCACCGAGCTTGATGACGGTGGCGATGGCGACGGCGGAGGCGGCGGTGGCCGGAGG AGCTTCGCGAGGAAGTTCCGGCTGCCGGCGATGGTGGACGCCGACGGCATCTCGGCGGAG TACACCCACGGCGTGCTCAGGGTAACCGTCCCGAGGCTGCATACGCGGGCTCGCCCCGTC GTCAACCTCGCCGGCGGCGGCGGCGGTGGCGGTGGCCCGGCCTGCGACCCCGTCGCCCGA GCAGCCTGATTAGTGATTCGATATCAATCAAGAAAATTACTTAATTACTTATTTAAGTTG CACTGTGAGCTTAGGATTGGGGAAGTAATAGCAGTATAGTGAACTGTACAATTCTCAGGC ATTTCAGAATTTCAGAAAATTGCCAAATTGGCAGTGCCTGTTCGTTATCTTGTAGTATCA GTTGTTTTTTGTGCTATAGTACTCTATTTCTGTTCTGTCGCAGTAAAACGTGAAGGATTT AGTTTT