Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0516600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:19911366:19914456:1 gene:Os07g0516600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os07t0516600-01)
Sequence	ATGGGCCACGCCGTGGACGGCCGGCTGGAGGCGCTGCTCTCCGGCGGCGGCGGCGGCGGC GAGGCGGCGGCGCCGTGGGCGCGGCGCATGGCGGCCGCGGCGGCGCTGGAGCTCCGGCTG CTCGCGCCGCTCGCCGCGCCGGCCGTGGTGGTGTACATGCTGATCATCGTGATGTCCTCC GCCACCCAGATCTTCTGCGGTCAGCTCGGCAACGTCCAGCTCGCCGCCTCCTCCCTCGGC AACAATGGCATCCAGGTCTTCGCCTACGGCCTCATGCTCGGGATGGGCAGCGCGGTGGAG ACGCTGTGCGGGCAGGCGTACGGCGCCGGGAGGCACGAGATGCTCGGGGTGTACCTGCAG CGGTCGGCGGTGCTGCTGACGGCGGCCGGCGTCCCGCTGGCGGCGCTGTACGCGTGCTCG GAGCGCGTCCTCCTCCTGCTCGGCCAGTCGCCGGAGATCTCCCGCGCCGCCGCCGGGTTC GCCCGCGGCCTCATCCCGCAGATCTTCGCCTACGCCGCCAACTTCCCCATCCAGAAGTTC CTCCAGGCGCAGAGCATCGTGGCGCCCAGCGCCGCCGTGCTGGCGGCGAGCTTCGCGCTC CACCTGCCGCTCAGCTGGGCGGCGGTGCGGGTGCTCGGCCTGGGCCTCCCGGGGGCCGCC CTGGCGCTCAGCGCCACGTGGTGGGTGCTCGTCGCGGGGCAGTTCGCGTACATCGTGCGG AGCCCCCGGTGCGCCGCGACGTGGACGGGCTTCACCTGGGCGGCGTTCCACGACCTCGCC GCGTTCGCCAGGCTCTCCGCCGCGTCGGCGGTGATGCTGGCGCTCGAGGTCTGGTACTTC CAGGTGCTCATCCTCCTCGCCGGCATGCTCCCCGACCCACAGATCGCCCTCGACGCACTC ACCGTCTGCACGTCGATACAGTCATGGGTGTTCATGATCTCAGTGGGCTTCAATGCTGCT GCCAGCGTGAGGGTTGGGAATGAGCTCGGCGCCGGCAACCCCAGGTCGGCGGCGTTCTCG ACATGGATGGTCACCGCGCTCTCGGCGATCATAGCCGCCATTGCCGGCGTCGTGGTCATC CTGCTCAGGGACAAGCTGAGCTACATCTTCACCCAGGGCGAGGCCGTCTCGCGCGCCGTC TCCGACCTCTGCCCACTGCTTGTTGGCACCATCGTGCTCTGCGGGATCCAGCCCGTGTTG TCAGGTGTGGCTGTTGGCTGTGGATGGCAAGCATTGGTAGCATACATTAACATTGGATGC TACTACTTGATCGGCCTACCCCTCGGCGTGCTTCTGGGATTCAAATTTGACTATGGAATT AAGGGATTGTGGGGAGGCATGATTGGAGGGACGCTCATCCAAACACTTATTTTAATATGG ATCACATTCAGAACAGATTGGAACAAGGAGGTCGAGGATGCGAGACGAAGATTAGATAAG TGGGATGACACAAAGCAGCCTCTTCTTGTTAACAGACAGTGA

Peptide Sequence

PEP ID	Os07t0516600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:19911366:19914456:1 gene:Os07g0516600 transcript:Os07t0516600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os07t0516600-01)
Sequence	MGHAVDGRLEALLSGGGGGGEAAAPWARRMAAAAALELRLLAPLAAPAVVVYMLIIVMSS ATQIFCGQLGNVQLAASSLGNNGIQVFAYGLMLGMGSAVETLCGQAYGAGRHEMLGVYLQ RSAVLLTAAGVPLAALYACSERVLLLLGQSPEISRAAAGFARGLIPQIFAYAANFPIQKF LQAQSIVAPSAAVLAASFALHLPLSWAAVRVLGLGLPGAALALSATWWVLVAGQFAYIVR SPRCAATWTGFTWAAFHDLAAFARLSAASAVMLALEVWYFQVLILLAGMLPDPQIALDAL TVCTSIQSWVFMISVGFNAAASVRVGNELGAGNPRSAAFSTWMVTALSAIIAAIAGVVVI LLRDKLSYIFTQGEAVSRAVSDLCPLLVGTIVLCGIQPVLSGVAVGCGWQALVAYINIGC YYLIGLPLGVLLGFKFDYGIKGLWGGMIGGTLIQTLILIWITFRTDWNKEVEDARRRLDK WDDTKQPLLVNRQ

Transcript Sequence

Transcript ID	Os07t0516600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:19911366:19914456:1 gene:Os07g0516600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os07t0516600-01)
Sequence	CAGTGTCAGTCCACCCAACTCCTCACCGGAACCAAGATCTTTAGTATACTAGCGGCGCGC GCGCGATTCTTGAATCTTTTGTTCGCCGCAGCAGTTCGATCGAGGAATCGATCGATCGAT CCATCCACAGATGGGCCACGCCGTGGACGGCCGGCTGGAGGCGCTGCTCTCCGGCGGCGG CGGCGGCGGCGAGGCGGCGGCGCCGTGGGCGCGGCGCATGGCGGCCGCGGCGGCGCTGGA GCTCCGGCTGCTCGCGCCGCTCGCCGCGCCGGCCGTGGTGGTGTACATGCTGATCATCGT GATGTCCTCCGCCACCCAGATCTTCTGCGGTCAGCTCGGCAACGTCCAGCTCGCCGCCTC CTCCCTCGGCAACAATGGCATCCAGGTCTTCGCCTACGGCCTCATGCTCGGGATGGGCAG CGCGGTGGAGACGCTGTGCGGGCAGGCGTACGGCGCCGGGAGGCACGAGATGCTCGGGGT GTACCTGCAGCGGTCGGCGGTGCTGCTGACGGCGGCCGGCGTCCCGCTGGCGGCGCTGTA CGCGTGCTCGGAGCGCGTCCTCCTCCTGCTCGGCCAGTCGCCGGAGATCTCCCGCGCCGC CGCCGGGTTCGCCCGCGGCCTCATCCCGCAGATCTTCGCCTACGCCGCCAACTTCCCCAT CCAGAAGTTCCTCCAGGCGCAGAGCATCGTGGCGCCCAGCGCCGCCGTGCTGGCGGCGAG CTTCGCGCTCCACCTGCCGCTCAGCTGGGCGGCGGTGCGGGTGCTCGGCCTGGGCCTCCC GGGGGCCGCCCTGGCGCTCAGCGCCACGTGGTGGGTGCTCGTCGCGGGGCAGTTCGCGTA CATCGTGCGGAGCCCCCGGTGCGCCGCGACGTGGACGGGCTTCACCTGGGCGGCGTTCCA CGACCTCGCCGCGTTCGCCAGGCTCTCCGCCGCGTCGGCGGTGATGCTGGCGCTCGAGGT CTGGTACTTCCAGGTGCTCATCCTCCTCGCCGGCATGCTCCCCGACCCACAGATCGCCCT CGACGCACTCACCGTCTGCACGTCGATACAGTCATGGGTGTTCATGATCTCAGTGGGCTT CAATGCTGCTGCCAGCGTGAGGGTTGGGAATGAGCTCGGCGCCGGCAACCCCAGGTCGGC GGCGTTCTCGACATGGATGGTCACCGCGCTCTCGGCGATCATAGCCGCCATTGCCGGCGT CGTGGTCATCCTGCTCAGGGACAAGCTGAGCTACATCTTCACCCAGGGCGAGGCCGTCTC GCGCGCCGTCTCCGACCTCTGCCCACTGCTTGTTGGCACCATCGTGCTCTGCGGGATCCA GCCCGTGTTGTCAGGTGTGGCTGTTGGCTGTGGATGGCAAGCATTGGTAGCATACATTAA CATTGGATGCTACTACTTGATCGGCCTACCCCTCGGCGTGCTTCTGGGATTCAAATTTGA CTATGGAATTAAGGGATTGTGGGGAGGCATGATTGGAGGGACGCTCATCCAAACACTTAT TTTAATATGGATCACATTCAGAACAGATTGGAACAAGGAGGTCGAGGATGCGAGACGAAG ATTAGATAAGTGGGATGACACAAAGCAGCCTCTTCTTGTTAACAGACAGTGATAGTATCA GAAGGAAAAATAGGAGCTGATATATGTATGCGGCTGCAAATTCGTCAGATTGGACGCCAT CTAACCGCAATGATATGACTGTCCCGGACGGTTGGATCAACGACATTCAGTTCAGTCAGT TTCATGTGGGCTCATGCTACCACTTCAGAATTCACATAATGCCATGAATTATTCTTTTTT GGGGAATACGCAAGGACCGTGTTTTTTAATTAAGAGGAATAAATGTTATTTACGTGC