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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0516500-04
CDS Infomation

cds chromosome:IRGSP-1.0:7:19906323:19907780:-1 gene:Os07g0516500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0516500-01);Conserved hypothetical protein. (Os07t0516500-02);Hypothetical conserved gene. (Os07t0516500-03);Hypothetical conserved gene. (Os07t0516500-04)
Sequence

TTGGTAAATGATGGAAGTCAAGAGTTATATCCAGGTTGCAAAAACGCTATTTCTGTTGAT
GGCCAGGCACTAAATGATTGTGTTGACATCCTTGTTAACACTGTATTCAATCAGCACACC
ATAATACCTCGTGCATATGGAATGATCAGCAAGTTAGGAAGTGCTCAAGCTCGATGCATC
CCATGGCCACGTGACAATCTAATGCATCCAAGTGGTCAAGCTCTACATTCTAAGGTGTCG
ACTATTGCGAGACATAACTCAGCTAACCAAGGAAATTCGGTGGCACTAACTGAGGTGTTC
AAGCACAATAGCATTGATAATGCACTGCAAAGTGTTGTTGGACACAAGAGAAAGGTGCAT
GATCTAACACCAAAGGAGAATATAGGACGTGAAGATACACATTCTAGGGCAAAGAAGATT
GGGAAGGCCAGACCCGATTCTCCATATGCTAACTTCACCAATAGCCAACTGTTAACAACT
TCCCGGTTCTAG

Peptide Sequence

PEP ID

Os07t0516500-04
PEP Infomation

pep chromosome:IRGSP-1.0:7:19906323:19907780:-1 gene:Os07g0516500 transcript:Os07t0516500-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0516500-01);Conserved hypothetical protein. (Os07t0516500-02);Hypothetical conserved gene. (Os07t0516500-03);Hypothetical conserved gene. (Os07t0516500-04)
Sequence

LVNDGSQELYPGCKNAISVDGQALNDCVDILVNTVFNQHTIIPRAYGMISKLGSAQARCI
PWPRDNLMHPSGQALHSKVSTIARHNSANQGNSVALTEVFKHNSIDNALQSVVGHKRKVH
DLTPKENIGREDTHSRAKKIGKARPDSPYANFTNSQLLTTSRF

Transcript Sequence

Transcript ID

Os07t0516500-04
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:19906323:19907780:-1 gene:Os07g0516500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0516500-01);Conserved hypothetical protein. (Os07t0516500-02);Hypothetical conserved gene. (Os07t0516500-03);Hypothetical conserved gene. (Os07t0516500-04)
Sequence

AGTTGGTAAATGATGGAAGTCAAGAGTTATATCCAGGTTGCAAAAACGCTATTTCTGTTG
ATGGCCAGGCACTAAATGATTGTGTTGACATCCTTGTTAACACTGTATTCAATCAGCACA
CCATAATACCTCGTGCATATGGAATGATCAGCAAGTTAGGAAGTGCTCAAGCTCGATGCA
TCCCATGGCCACGTGACAATCTAATGCATCCAAGTGGTCAAGCTCTACATTCTAAGGTGT
CGACTATTGCGAGACATAACTCAGCTAACCAAGGAAATTCGGTGGCACTAACTGAGGTGT
TCAAGCACAATAGCATTGATAATGCACTGCAAAGTGTTGTTGGACACAAGAGAAAGGTGC
ATGATCTAACACCAAAGGAGAATATAGGACGTGAAGATACACATTCTAGGGCAAAGAAGA
TTGGGAAGGCCAGACCCGATTCTCCATATGCTAACTTCACCAATAGCCAACTGTTAACAA
CTTCCCGGTTCTAGCTCAAGTCCAAATGCATGGACAGGTTTTGGTGTAATCCATTCTCAG
GTTGTGTTTTTCCTCATTGCAAATACATGCGAGCCTCACAGGATGACAGGGGCAAGCCAC
TCAGTAGATCAATGATGTTTATTGTCTTGTAAATCATAAATATACCATTGATTGTGATAG
CATATCTTACAAACTTAATTACCATTGAGATGATTTGTGAACCACTTAATGTGCGATTGA
ATTGGAATTGGGAATTATTCTTCTATATTGTTTTTGGAG