Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0516300-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:19887349:19888283:-1 gene:Os07g0516300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os07t0516300-01)
Sequence

ATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG
GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCG
GCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATGTCTGGTACGCGCCG
TCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGGGGAGGGGGAGGG
CTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGG
GCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCC
GGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAG
GAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCG
CGGCGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGAC
GCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGA

Peptide Sequence

PEP ID

Os07t0516300-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:19887349:19888283:-1 gene:Os07g0516300 transcript:Os07t0516300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os07t0516300-01)
Sequence

MAKARKQQPQGPFAGGAAAGERSFLGFQYHHHHRGGSVAPAYGDDDDLPDLAEADVWYAP
SSEGGADHRGGGGGGGGGGGLEIGGGGWGGGKHKVGGLSRAFADGRQVAASAPVQVPAWP
GRYADPDQAAFAEEEKRREEEDDAGDGDGDGWVPPHVYLARRQARSSVVEGVGRTLKGRD
ASRVRDAVWSRTGFDG

Transcript Sequence

Transcript ID

Os07t0516300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:19887349:19888283:-1 gene:Os07g0516300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os07t0516300-01)
Sequence

CCGTTTGCTCCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTC
GTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGC
AGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGC
CCGTTCGCCGGCGGGGCCGCCGCCGGGGAGAGGTCGTTCCTCGGGTTCCAGTACCACCAC
CACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTG
GCGGAGGCTGATGTCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGC
GGCGGCGGCGGAGGGGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGG
AAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCG
GCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTC
GCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGG
TGGGTGCCGCCGCACGTGTACCTGGCGCGGCGGCAGGCGAGGTCGTCGGTGGTGGAGGGC
GTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGA
ACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTT
CTTCTCTTCTTCGATTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAA
AATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAG
AAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGC