Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0515700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:19827289:19833195:1 gene:Os07g0515700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA, clone: J100054L12, full insert sequence. (Os07t0515700-01)
Sequence

CTTACCGAGGGATTAGATTTGGAAAAGATTGACGAGTTTATGGATGAAAGGAATATTTCG
ATTGCCAAGACCATAGCAAATGACATAATCATCCCAGACCCTGCTCCCGAGTGGATGTGT
TATACCTTCTTGGACAAATATGACCAATTGGAGCCCATCTTTATAAAGGATAGTGCACGT
TGCTTCCTCCGATTATTCAAGAACTGGAAGGGCTATACCATGTCATGGAATCTCACCATC
ACCGCACAAACCTTAACCTGCATGGTCAGTTTCAATTCCCTGCGATGCGCGAAAGTTGTA
TTGGAGGGCAGGGCACCTGAGCTCCTTGGGGTGCATGCCAATCCCAACTGCGTAACCAAA
TATGGATACTTCCCGCTCCATGAAGCTGCTGAAAGGTTCTCTATTGAGATGATCAAGCTG
CTCTTACGCCATGGTGCATCAGCCAACGTACGCACGGTTGGCGACGATGTCATCGATGGC
CTACTCCTGCTCCATATCGCGATTGAGAACACTTGCCTGCATAAGTATCTTGAGGACAAT
CTTTCTCCCGGCCAGGATCATCTGGATTATATCTACAAGCTTTTCCATCTGCTGTGTTTA
CCTGAAATGAAGATCTTCCTGGATACAACTAGACTACTTGCAGGAAAAACAAATAATCTC
CTTGAAGAGCTCTGGAATTATATTGAGAATGGAAAACTTATCCAGACCGCAATTCTACTA
CTGGCTGCTCAGGAGCAGATCCGAGGGGGATGTTCCTCCAAGATAAATGGCAGTAGAAAG
AAAAATGGGTATGACATTATGTACAAGCGTATACTGAGGCTTTCATTTGCCTTGAGATGG
GGGAAAGTTTCAAATGGAATGACACAGAAGCTTATGAAGGAAAAGAGGGCACTCATTGAT
TGCATGGGGCTGCTTGTTGATGCAATTTCCCATGCTGGTGAACCTCTTTCTGCATACATT
CAGGCTCATTCAGAGGCGCCACATGTGGAGGTCTTGGAACATGTTTCAACTATCCTCAAG
GAGTATGGATTTTGCCCTACTGAAGAAGTCATGGACACCATAAACCTCCAACCTTATGAC
TGCAAAATGTCAGAAACAAAATCATGTAGCAAAGGGTTTACAGATGCAAACACGGCAGTT
GCGGAAATGGCTAATCTGCATGCTGCAGACAAAAAGGCTGGGAGAAAGGAAGTAGGCAGA
GGATGGGATCCCACATATACAAGGAGAAATTTTTTCCCATATTGGAGATCAATTTTACGA
ACCCGGTGCCCTGTGAAGGTGTATCCAACCTATGCACGAGCAGATGCTAGGTCCGGGCGT
GATCTTGAACAGATCCGTGCCTTTGAGAGCAACTCATCAATGGCCAAAAATCGTATACTT
GGTTCAGTGGGAAGGATCCCATCACTACTTGCAAGCAATCATCAATCCAAAAGGAGCTTT
AGCACTGCTGCTACTGGTGCATTCAGGCTCTTGAAGCTGTTGAAGTAA

Peptide Sequence

PEP ID

Os07t0515700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:19827289:19833195:1 gene:Os07g0515700 transcript:Os07t0515700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA, clone: J100054L12, full insert sequence. (Os07t0515700-01)
Sequence

LTEGLDLEKIDEFMDERNISIAKTIANDIIIPDPAPEWMCYTFLDKYDQLEPIFIKDSAR
CFLRLFKNWKGYTMSWNLTITAQTLTCMVSFNSLRCAKVVLEGRAPELLGVHANPNCVTK
YGYFPLHEAAERFSIEMIKLLLRHGASANVRTVGDDVIDGLLLLHIAIENTCLHKYLEDN
LSPGQDHLDYIYKLFHLLCLPEMKIFLDTTRLLAGKTNNLLEELWNYIENGKLIQTAILL
LAAQEQIRGGCSSKINGSRKKNGYDIMYKRILRLSFALRWGKVSNGMTQKLMKEKRALID
CMGLLVDAISHAGEPLSAYIQAHSEAPHVEVLEHVSTILKEYGFCPTEEVMDTINLQPYD
CKMSETKSCSKGFTDANTAVAEMANLHAADKKAGRKEVGRGWDPTYTRRNFFPYWRSILR
TRCPVKVYPTYARADARSGRDLEQIRAFESNSSMAKNRILGSVGRIPSLLASNHQSKRSF
STAATGAFRLLKLLK

Transcript Sequence

Transcript ID

Os07t0515700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:19827289:19833195:1 gene:Os07g0515700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA, clone: J100054L12, full insert sequence. (Os07t0515700-01)
Sequence

ACTTCGCCCGCCACGCCGCCTCCCCCTGCGCCGATTTCCATCCGTATCCCTCGAGGTTGG
GTGCCCGTCGTCCTGCTGCTTTCCGCCTCCGAAAAAAAAAAGAACGAAAAATGTCAAAAA
GAAGAAAAAAGAACGAAAGGGTGGAGTTGAGATTTAAGGCACCCGATTATGCTACGTGGA
AAAAGGAGGCAGCTGCATGCGACAAAGCTAATGGCAATGGTAAAGATGGATCGATTACAG
TAAGAAGTGATTATCCATGGCACCCTCCCCATCGTTTTTAACTTACCGAGGGATTAGATT
TGGAAAAGATTGACGAGTTTATGGATGAAAGGAATATTTCGATTGCCAAGACCATAGCAA
ATGACATAATCATCCCAGACCCTGCTCCCGAGTGGATGTGTTATACCTTCTTGGACAAAT
ATGACCAATTGGAGCCCATCTTTATAAAGGATAGTGCACGTTGCTTCCTCCGATTATTCA
AGAACTGGAAGGGCTATACCATGTCATGGAATCTCACCATCACCGCACAAACCTTAACCT
GCATGGTCAGTTTCAATTCCCTGCGATGCGCGAAAGTTGTATTGGAGGGCAGGGCACCTG
AGCTCCTTGGGGTGCATGCCAATCCCAACTGCGTAACCAAATATGGATACTTCCCGCTCC
ATGAAGCTGCTGAAAGGTTCTCTATTGAGATGATCAAGCTGCTCTTACGCCATGGTGCAT
CAGCCAACGTACGCACGGTTGGCGACGATGTCATCGATGGCCTACTCCTGCTCCATATCG
CGATTGAGAACACTTGCCTGCATAAGTATCTTGAGGACAATCTTTCTCCCGGCCAGGATC
ATCTGGATTATATCTACAAGCTTTTCCATCTGCTGTGTTTACCTGAAATGAAGATCTTCC
TGGATACAACTAGACTACTTGCAGGAAAAACAAATAATCTCCTTGAAGAGCTCTGGAATT
ATATTGAGAATGGAAAACTTATCCAGACCGCAATTCTACTACTGGCTGCTCAGGAGCAGA
TCCGAGGGGGATGTTCCTCCAAGATAAATGGCAGTAGAAAGAAAAATGGGTATGACATTA
TGTACAAGCGTATACTGAGGCTTTCATTTGCCTTGAGATGGGGGAAAGTTTCAAATGGAA
TGACACAGAAGCTTATGAAGGAAAAGAGGGCACTCATTGATTGCATGGGGCTGCTTGTTG
ATGCAATTTCCCATGCTGGTGAACCTCTTTCTGCATACATTCAGGCTCATTCAGAGGCGC
CACATGTGGAGGTCTTGGAACATGTTTCAACTATCCTCAAGGAGTATGGATTTTGCCCTA
CTGAAGAAGTCATGGACACCATAAACCTCCAACCTTATGACTGCAAAATGTCAGAAACAA
AATCATGTAGCAAAGGGTTTACAGATGCAAACACGGCAGTTGCGGAAATGGCTAATCTGC
ATGCTGCAGACAAAAAGGCTGGGAGAAAGGAAGTAGGCAGAGGATGGGATCCCACATATA
CAAGGAGAAATTTTTTCCCATATTGGAGATCAATTTTACGAACCCGGTGCCCTGTGAAGG
TGTATCCAACCTATGCACGAGCAGATGCTAGGTCCGGGCGTGATCTTGAACAGATCCGTG
CCTTTGAGAGCAACTCATCAATGGCCAAAAATCGTATACTTGGTTCAGTGGGAAGGATCC
CATCACTACTTGCAAGCAATCATCAATCCAAAAGGAGCTTTAGCACTGCTGCTACTGGTG
CATTCAGGCTCTTGAAGCTGTTGAAGTAAAGCACGAGTACAAAAGGTTCTATAGTTGAGA
GACCAAATATTGACTTTTCTCTGAAAATTAATTCACCTGTGACAGATCTAGCATGGGGGC
TCCAATACCCTTGCCCGCTGGATCTTGAGGGAAGGAGGAAGAAGAGGGATTTGAGCAAGA
AGGCAATGACCCTCCTTCAATCTCAAGCTGCATCAGCCCCTGTAATTCACAATAAATATG
ATTCATTTTATATCTGTACGTAGCAAATTAATTTATAAAAAGGGTCAAAAAGGAAATATT
TTTTTCTT