Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0515100-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:19769005:19773487:-1 gene:Os07g0515100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 19 description:Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2). (Os07t0515100-01);Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2). (Os07t0515100-02)
Sequence	ATGGGGTCGTGTTGCAGCAGAGCTACGTCTCCAGATTCTGGTCGAGGAGGAGCAAACGGT TATGGCTATTCTCACCAGACAAAACCTGCTCAGACAACTCCTAGCTATAACCATCCTCAG CCGCCGCCGCCAGCTGAGGTGAGGTACACACCATCAGCAATGAACCCTCCGGTAGTCCCA CCTGTGGTTGCCCCACCGAAGCCCACCCCAGACACAATTCTTGGAAAGCCGTATGACGAT GTGCGCTCGGTTTACTCCCTTGGAAAGGAACTCGGAAGGGGACAGTTTGGGGTGACATAC CTGTGCACGGAGATCGCTAGTGGTAAGCAGTATGCTTGCAAATCCATCTCTAAGCGCAAG CTTGTGAGCAAGGCCGACAAGGAGGACATTCGCCGGGAGATTCAGATCATGCAGCACCTA TCTGGACAACAAAACATTGTCGAGTTCCGGGGAGCATATGAGGACAAGAGCAATGTCCAT GTTGTCATGGAGCTCTGCGCTGGTGGGGAGCTGTTTGATCGGATCATTGCCAAGGGGCAC TACTCAGAGCGTGCGGCTGCTACCATCTGCAGGGCAGTGGTGAATGTTGTCAACATTTGC CATTTTATGGGAGTGATGCATCGTGATTTAAAACCGGAGAACTTCTTACTTGCAACCAAA GAAGAGAATGCAATGCTCAAAGCCACTGATTTTGGTCTCTCAGTTTTCATTGAAGAAGGA AAAATGTATAGAGACATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTCCTTCGGCGG AATTATGGTAAAGAGATTGATGTATGGAGTGCAGGCGTTATTTTGTACATTCTTCTCAGT GGTGTTCCTCCATTTTGGGCTGAAACTGAAAAGGGAATATTTGATGCTATTCTTCAAGGG GAGATTGACTTTGAGAGTCAACCATGGCCATCAATATCCGAGAGTGCTAAAGACCTTGTT AGAAAGATGTTGACACAAGATCCAAAGAAAAGAATTACTTCGGCCCAAGTTCTCCAACAT CCCTGGCTCAGAGATGGAGAAGCATCTGACAAACCTATTGACAGCGCTGTTCTTTCTAGG ATGAAGCAATTCAGAGCAATGAACAAGCTGAAAAAGATGGCTCTGAAGGTTATTGCTTCA AACCTTAATGAGGAGGAGATCAAGGGCCTGAAGCAAATGTTCACAAACATGGACACAGAC AACAGCGGGACCATCACATATGAAGAACTCAAAGCAGGATTAGCCAAACTTGGATCAAAG CTTTCAGAAGCTGAAGTAAAGCAGTTGATGGAAGCTGCTGATGTAGACGGCAATGGATCC ATCGACTATGTTGAATTTATCACTGCCACAATGCATAGACACAAGCTCGAAAGAGATGAG CATTTGTTTAAGGCATTCCAGTATTTTGACAAAGACAACAGTGGCTTCATCACAAGAGAT GAACTGGAATCCGCTTTAATCGAGCATGAAATGGGCGATACAAGTACCATAAAGGATATT ATATCAGAAGTCGACACGGATAATGATGGGAGGATTAACTACGAGGAATTTTGCGCTATG ATGAGAGGAGGGGGGATGCAGCAGCCTATGAGGCTCAAATAG

Peptide Sequence

PEP ID	Os07t0515100-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:19769005:19773487:-1 gene:Os07g0515100 transcript:Os07t0515100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 19 description:Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2). (Os07t0515100-01);Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2). (Os07t0515100-02)
Sequence	MGSCCSRATSPDSGRGGANGYGYSHQTKPAQTTPSYNHPQPPPPAEVRYTPSAMNPPVVP PVVAPPKPTPDTILGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRK LVSKADKEDIRREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGH YSERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVFIEEG KMYRDIVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQG EIDFESQPWPSISESAKDLVRKMLTQDPKKRITSAQVLQHPWLRDGEASDKPIDSAVLSR MKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSK LSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRD ELESALIEHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRGGGMQQPMRLK

Transcript Sequence

Transcript ID	Os07t0515100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:19769005:19773487:-1 gene:Os07g0515100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 19 description:Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2). (Os07t0515100-01);Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2). (Os07t0515100-02)
Sequence	ACCCTTGTGCCCTTATCTCCTATGGTTGCTTCCACTGTCACCAAAGGGGGACTCGCCATC TACCTTGTTCCTCAGTTCATGCGAATTTCATGCGGTCCTGGGCTGTGACTGGGAGTAGAT TGAGGGTTGATCTCGTTTGCGGAGTAACAAATTTGCAAGCCTACAACTGCTAGGGAGAAT TTGACTAAAAATGGGGTCGTGTTGCAGCAGAGCTACGTCTCCAGATTCTGGTCGAGGAGG AGCAAACGGTTATGGCTATTCTCACCAGACAAAACCTGCTCAGACAACTCCTAGCTATAA CCATCCTCAGCCGCCGCCGCCAGCTGAGGTGAGGTACACACCATCAGCAATGAACCCTCC GGTAGTCCCACCTGTGGTTGCCCCACCGAAGCCCACCCCAGACACAATTCTTGGAAAGCC GTATGACGATGTGCGCTCGGTTTACTCCCTTGGAAAGGAACTCGGAAGGGGACAGTTTGG GGTGACATACCTGTGCACGGAGATCGCTAGTGGTAAGCAGTATGCTTGCAAATCCATCTC TAAGCGCAAGCTTGTGAGCAAGGCCGACAAGGAGGACATTCGCCGGGAGATTCAGATCAT GCAGCACCTATCTGGACAACAAAACATTGTCGAGTTCCGGGGAGCATATGAGGACAAGAG CAATGTCCATGTTGTCATGGAGCTCTGCGCTGGTGGGGAGCTGTTTGATCGGATCATTGC CAAGGGGCACTACTCAGAGCGTGCGGCTGCTACCATCTGCAGGGCAGTGGTGAATGTTGT CAACATTTGCCATTTTATGGGAGTGATGCATCGTGATTTAAAACCGGAGAACTTCTTACT TGCAACCAAAGAAGAGAATGCAATGCTCAAAGCCACTGATTTTGGTCTCTCAGTTTTCAT TGAAGAAGGAAAAATGTATAGAGACATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGT CCTTCGGCGGAATTATGGTAAAGAGATTGATGTATGGAGTGCAGGCGTTATTTTGTACAT TCTTCTCAGTGGTGTTCCTCCATTTTGGGCTGAAACTGAAAAGGGAATATTTGATGCTAT TCTTCAAGGGGAGATTGACTTTGAGAGTCAACCATGGCCATCAATATCCGAGAGTGCTAA AGACCTTGTTAGAAAGATGTTGACACAAGATCCAAAGAAAAGAATTACTTCGGCCCAAGT TCTCCAACATCCCTGGCTCAGAGATGGAGAAGCATCTGACAAACCTATTGACAGCGCTGT TCTTTCTAGGATGAAGCAATTCAGAGCAATGAACAAGCTGAAAAAGATGGCTCTGAAGGT TATTGCTTCAAACCTTAATGAGGAGGAGATCAAGGGCCTGAAGCAAATGTTCACAAACAT GGACACAGACAACAGCGGGACCATCACATATGAAGAACTCAAAGCAGGATTAGCCAAACT TGGATCAAAGCTTTCAGAAGCTGAAGTAAAGCAGTTGATGGAAGCTGCTGATGTAGACGG CAATGGATCCATCGACTATGTTGAATTTATCACTGCCACAATGCATAGACACAAGCTCGA AAGAGATGAGCATTTGTTTAAGGCATTCCAGTATTTTGACAAAGACAACAGTGGCTTCAT CACAAGAGATGAACTGGAATCCGCTTTAATCGAGCATGAAATGGGCGATACAAGTACCAT AAAGGATATTATATCAGAAGTCGACACGGATAATGATGGGAGGATTAACTACGAGGAATT TTGCGCTATGATGAGAGGAGGGGGGATGCAGCAGCCTATGAGGCTCAAATAGTCTGTTTC CTTGTAGAAAATGATGTACAATTACATTAGTAAACTGTTTTCGCCTTCTTTTTTTTGTTC CATGGATGGTAGTCGACGGATAAAAGGTTTACCCTGGACGCAGCTTTTGCATTGTTGAGA TGATTGTGTATATTTTCTTGCCTTGCCCGTGTATGGTGTAGTGATTTGAATGTCCTCCCT TTTGTAAGTTGTTTCTGCAAGTACACACAATAAAAGAGCATTTTTGCACCTCAATTCTTC TGC