Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0510100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:19427927:19432234:1 gene:Os07g0510100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine aminopeptidase-like protein. (Os07t0510100-01)
Sequence	ATGGCCGCGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGG TTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATC GCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTG GAGATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGG CGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTA GGTTCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATC GCTGGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTG ATTAAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAG GCCGGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCA CTAAATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATC ATGAATGTTGATGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTT GTATGTGGAGAAGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTG GAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATA AGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATT GGACCTATTTGGCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGA ATGGTTGAAGGTCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACA GTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTT AAGCATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGA

Peptide Sequence

PEP ID	Os07t0510100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:19427927:19432234:1 gene:Os07g0510100 transcript:Os07t0510100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine aminopeptidase-like protein. (Os07t0510100-01)
Sequence	MAAPGACLASRSPPAFLAGGFLAARPAAVSPIPSRSGKSIAPSRRFIVSNKLAWVEDELV EITESQEPSSASSKKRPPLRRGKISPQLPVPEHIPRPSYVGSNRPQELSSVRQIHSAEGI AGMRAACKLAARALDFAGTLIKPSVTTNEIDREVHNMIIEAGAYPSQLGYGGFPKSICTS LNECVCHGVPDSTQLQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDDSIRHFLKAAEECL EKGITVCRDGVNYKKIGKKISKLAYFYGYYVVDRFVGHGIGPIWHSEPLILHHANDNSGR MVEGQTFTIEPILTMEKAETVTWEDGWTTVTADGSWAAQFKHTVLVTRTGAEILTKL

Transcript Sequence

Transcript ID	Os07t0510100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:19427927:19432234:1 gene:Os07g0510100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine aminopeptidase-like protein. (Os07t0510100-01)
Sequence	GCTTAAACCCAAGCTCTGGCTCTCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATG GCCGCGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTC CTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCA CCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAG ATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGT GGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGT TCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCT GGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATT AAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCC GGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTA AATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATG AATGTTGATGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTA TGTGGAGAAGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAG AAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGC AAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGA CCTATTTGGCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATG GTTGAAGGTCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTT ACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAG CATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTT TATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGC CCCAGCCCCCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAG GATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCA GGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGC ATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGTCCTTAATTTGTT TTGTTTCCTCCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCT TGACCTGCTGCAGCCTGTATACAAATTGCCAATGCCAAGCAGAATCCCCATCACGAATTC ACGATGGGCC