Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0507500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:19271812:19276185:-1 gene:Os07g0507500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1723 domain containing protein. (Os07t0507500-01)
Sequence

ATGGAATCCGCAGAGGCAGAACCAACAAACAAAAGCGTCATTCAGGGAACCCATGAACTA
ACCGTATGCCAGACGACGGAGAGACTCGACACATGGAAGCTGAATGAGCAGCAGCAACAA
TTGGTCGATGCAAGCGGGCTCGGCAACCTGATACACACAGCAGGCCTAGTCATCGATCGC
ATCGCGCTCATGGCATTCTTCGAACTGTGGAGCAAGGAGACCAACACTGCTCAGCTCAAT
GGCTTTGAAATGGCACCCTCACTCAGGGACGCCGCCTACATACTGGGGATTCCGGTGACA
GGCCGTGTGGTGACAACCGGAGCTGTGCTCAACAAGTCGGTCGAAGACCTCTGCTTCCAG
TATCTGGGGCAAGTGCCTGATTGCAGGGACTGCAGGGGCAGCCATGTGAAGCTCTCTTGG
CTGCAATCCAAGTTTAGCCGGATCCCGGAACGCCCCACCAATGATCAGACCATGTATGGC
ACCAGGGCATATCTCCTGTTCTTGATTGGATCAGCCTTACTTCCAGAGAGGGACAGGGGC
TATGTCTCACCAAAGTATTTGCCACTTCTGTCAGACTTTGACAAGGTACAGGAATATGCT
TGGGGTGCTGCTGCTCTTGCTCATCTCTACAAGGCTCTCTCCATCGCCGTGGCCCATTCT
GCCAGAAAAAGGCTATTCGGTAGCGCGGCTTTGCTCATGGGCTGGATATATGAGTATATT
CCGGCATTGCGCCCTGACATGTATGATCCTCCAGAACACATCTTCCCACGAGTACTCAAG
TGGACAGGGAGCACGATCTCTCAACCGGCCAAGAACGTTTCAGACATCAGGAAAGCCTTC
GGCCTGCTTCAAGTTTCTGATGTCAACTGGGAGCCCTACAAGGGCGTTGATCCTGCATCC
ATTCCGAAGCATTGCGCTGCTCCGGATAACCTCTGCTTCTCCAGAACATGGCTGGTCAGC
TTCAACCTCAAGGAAATCTACGCCCCGGACCGGTTCGCTCGCCAGTTTGGGCAAGAACAG
CATCGCCCGCTCAACGATGTCCCCGCGTTCCAGCGGCAGCTGTGGAACCCGGCAGTGGAC
TGGAGCCTGATGTACGCTTCAGAGATCGAACGGTTCCAGCAGCTGATCAACGCTGCAGAT
GGTGGTGATCATGGTCATACAGCAGATGCCGCCGCCGCCGCCGCCGCAGATGTTTTCACT
CCGGCGACCATGGCGCGAGCTTCCCTTGGGCTCAGCCTGATATCCGTGGTGGAGGGCGTC
AGGGAGGAGCTCCCGACCGTCGCGCGGTTTCTGGAGCAACACCGCCTCCCCGCCGAGCTG
GCGACGTCCCTGTCCAGGATCCGCGGTCTCATCGAGGCCTCCCCTCCTGCTCCGCCGCTT
AAGCGAGGCGACGCCGCGCCACAGCCCCAGCCCCAGGTGATCGCGGTGATCCCTCCCCTG
GCTGTGATGCCACCGCGCGAGCAGGAAGCGCCGCATGGCACGGGGGACGCGGAGGCTCCG
GGGATCGTGCGCGGCGACGCCGACGACGACGACGCCGTGCCGCCGAAGGAGCGGTCTGAT
GAGCAGCAGCAGCAGGATGAGGAGGAGGAGGAGGAGGAGGAGCAGAAGTGGCGGCGGCGG
CGGCGGCGGGAGGAGGAGGACGGGGCGGCGAAGGGATCAGGCGGCGGCGGCGGCGCGGTG
CGGCGGAGCAGCCGGAGCTGCGTGCAGGCGAAGAGGTTCAGGCGCGTGGGAGGGAAGGGC
TCGCAGTCGTCCGACCCCATCGTGCTGTGA

Peptide Sequence

PEP ID

Os07t0507500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:19271812:19276185:-1 gene:Os07g0507500 transcript:Os07t0507500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1723 domain containing protein. (Os07t0507500-01)
Sequence

MESAEAEPTNKSVIQGTHELTVCQTTERLDTWKLNEQQQQLVDASGLGNLIHTAGLVIDR
IALMAFFELWSKETNTAQLNGFEMAPSLRDAAYILGIPVTGRVVTTGAVLNKSVEDLCFQ
YLGQVPDCRDCRGSHVKLSWLQSKFSRIPERPTNDQTMYGTRAYLLFLIGSALLPERDRG
YVSPKYLPLLSDFDKVQEYAWGAAALAHLYKALSIAVAHSARKRLFGSAALLMGWIYEYI
PALRPDMYDPPEHIFPRVLKWTGSTISQPAKNVSDIRKAFGLLQVSDVNWEPYKGVDPAS
IPKHCAAPDNLCFSRTWLVSFNLKEIYAPDRFARQFGQEQHRPLNDVPAFQRQLWNPAVD
WSLMYASEIERFQQLINAADGGDHGHTADAAAAAAADVFTPATMARASLGLSLISVVEGV
REELPTVARFLEQHRLPAELATSLSRIRGLIEASPPAPPLKRGDAAPQPQPQVIAVIPPL
AVMPPREQEAPHGTGDAEAPGIVRGDADDDDAVPPKERSDEQQQQDEEEEEEEEQKWRRR
RRREEEDGAAKGSGGGGGAVRRSSRSCVQAKRFRRVGGKGSQSSDPIVL

Transcript Sequence

Transcript ID

Os07t0507500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:19271812:19276185:-1 gene:Os07g0507500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1723 domain containing protein. (Os07t0507500-01)
Sequence

GCCCTTTCATTGCCCAACCAACGCTCGCCTGCATAGAAGAAGCTCTTCGCCTTCTTTGCT
GTGCTCTTGTTGCCTCTCGCTCGCTGCTGCGGCTACTCATTGATCCTGATGGAATCCGCA
GAGGCAGAACCAACAAACAAAAGCGTCATTCAGGGAACCCATGAACTAACCGTATGCCAG
ACGACGGAGAGACTCGACACATGGAAGCTGAATGAGCAGCAGCAACAATTGGTCGATGCA
AGCGGGCTCGGCAACCTGATACACACAGCAGGCCTAGTCATCGATCGCATCGCGCTCATG
GCATTCTTCGAACTGTGGAGCAAGGAGACCAACACTGCTCAGCTCAATGGCTTTGAAATG
GCACCCTCACTCAGGGACGCCGCCTACATACTGGGGATTCCGGTGACAGGCCGTGTGGTG
ACAACCGGAGCTGTGCTCAACAAGTCGGTCGAAGACCTCTGCTTCCAGTATCTGGGGCAA
GTGCCTGATTGCAGGGACTGCAGGGGCAGCCATGTGAAGCTCTCTTGGCTGCAATCCAAG
TTTAGCCGGATCCCGGAACGCCCCACCAATGATCAGACCATGTATGGCACCAGGGCATAT
CTCCTGTTCTTGATTGGATCAGCCTTACTTCCAGAGAGGGACAGGGGCTATGTCTCACCA
AAGTATTTGCCACTTCTGTCAGACTTTGACAAGGTACAGGAATATGCTTGGGGTGCTGCT
GCTCTTGCTCATCTCTACAAGGCTCTCTCCATCGCCGTGGCCCATTCTGCCAGAAAAAGG
CTATTCGGTAGCGCGGCTTTGCTCATGGGCTGGATATATGAGTATATTCCGGCATTGCGC
CCTGACATGTATGATCCTCCAGAACACATCTTCCCACGAGTACTCAAGTGGACAGGGAGC
ACGATCTCTCAACCGGCCAAGAACGTTTCAGACATCAGGAAAGCCTTCGGCCTGCTTCAA
GTTTCTGATGTCAACTGGGAGCCCTACAAGGGCGTTGATCCTGCATCCATTCCGAAGCAT
TGCGCTGCTCCGGATAACCTCTGCTTCTCCAGAACATGGCTGGTCAGCTTCAACCTCAAG
GAAATCTACGCCCCGGACCGGTTCGCTCGCCAGTTTGGGCAAGAACAGCATCGCCCGCTC
AACGATGTCCCCGCGTTCCAGCGGCAGCTGTGGAACCCGGCAGTGGACTGGAGCCTGATG
TACGCTTCAGAGATCGAACGGTTCCAGCAGCTGATCAACGCTGCAGATGGTGGTGATCAT
GGTCATACAGCAGATGCCGCCGCCGCCGCCGCCGCAGATGTTTTCACTCCGGCGACCATG
GCGCGAGCTTCCCTTGGGCTCAGCCTGATATCCGTGGTGGAGGGCGTCAGGGAGGAGCTC
CCGACCGTCGCGCGGTTTCTGGAGCAACACCGCCTCCCCGCCGAGCTGGCGACGTCCCTG
TCCAGGATCCGCGGTCTCATCGAGGCCTCCCCTCCTGCTCCGCCGCTTAAGCGAGGCGAC
GCCGCGCCACAGCCCCAGCCCCAGGTGATCGCGGTGATCCCTCCCCTGGCTGTGATGCCA
CCGCGCGAGCAGGAAGCGCCGCATGGCACGGGGGACGCGGAGGCTCCGGGGATCGTGCGC
GGCGACGCCGACGACGACGACGCCGTGCCGCCGAAGGAGCGGTCTGATGAGCAGCAGCAG
CAGGATGAGGAGGAGGAGGAGGAGGAGGAGCAGAAGTGGCGGCGGCGGCGGCGGCGGGAG
GAGGAGGACGGGGCGGCGAAGGGATCAGGCGGCGGCGGCGGCGCGGTGCGGCGGAGCAGC
CGGAGCTGCGTGCAGGCGAAGAGGTTCAGGCGCGTGGGAGGGAAGGGCTCGCAGTCGTCC
GACCCCATCGTGCTGTGAATCTGCGGCCGCTGCTCTCATCAGCTTTGCTACTAGCCTACC
AGTAGTGCTACCTTTGCAGTGAACTACGGTTGTGTTCGGTGTCCATGTGTCATGTGTGTT
AGGCTTAGGCAGACGGTCGAAGAGCTCTGGTACTGGTACTTACTCCTATGTATGTCGTTG
ATCGTTGAATTCAGGTTATGTAGCATTTGATTTGACTACTATGGATTTGATGACTACGCT
AGATTT