Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0501700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:18911787:18914891:1 gene:Os07g0501700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA196 description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0501700-01)
Sequence	ATGGAGTGCCTGCTTGGCTTGCTCAAGGTGCGCGTCATGCGGGGCCTCAACCTGGCCATC TGCGACCCGCTCACCCACAGCAGCGACCCCTACGTCGTCCTCCGCCACGGCTCCCAGAAA GTCAAGTCAAGTATAAGATATCATTCCATCAACCCAGAATGGAACGAGGAACTCACGTTA TCAATCACAAACATGATGCTGCCTGTTAAAATTGAAGTGTTTGACAAGGACACCTTCACC AAGGACGACAGCATGGGCGACGCGGAGTTCGGCATCCTGGACTTCGTCGAGATCGCCAAG CAGGACCACAGCCATCTCGGCGACGGCGCGGTGATGAAGACGATCCACCCGGACAAGGAG AACTGCTTCGCGGCGGAGAGCCACATCACATGGAAGGACGGCAAGGTGTCCCAGGACATC GTCCTCAAGCTCAGGAACACCGATACCGGCGAGATCATCCTGCACCTCCAATGGGTTAAC ATCCCAGGTGTCTCCCGGTGA

Peptide Sequence

PEP ID	Os07t0501700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:18911787:18914891:1 gene:Os07g0501700 transcript:Os07t0501700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA196 description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0501700-01)
Sequence	MECLLGLLKVRVMRGLNLAICDPLTHSSDPYVVLRHGSQKVKSSIRYHSINPEWNEELTL SITNMMLPVKIEVFDKDTFTKDDSMGDAEFGILDFVEIAKQDHSHLGDGAVMKTIHPDKE NCFAAESHITWKDGKVSQDIVLKLRNTDTGEIILHLQWVNIPGVSR

Transcript Sequence

Transcript ID	Os07t0501700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:18911787:18914891:1 gene:Os07g0501700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA196 description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0501700-01)
Sequence	GGCGTCCAGCTTCTCCATCTTCCTCCACGGCGCCCAAGTTTTGCGTTGCCTAAGCCTGCC TTCCTGCCGTTTCTTTCTGTCGCCCGTCGTCTCCTCCTCCTCCTCTTCCTTCAGCTTTAA CTCCGGTAATAAGGTCGACGCGCGCGGCCGCGAGAGGAGGCTGATCAGCCCGGAGAGACG ATCTCGTTCGATCGATCGATGGAGTGCCTGCTTGGCTTGCTCAAGGTGCGCGTCATGCGG GGCCTCAACCTGGCCATCTGCGACCCGCTCACCCACAGCAGCGACCCCTACGTCGTCCTC CGCCACGGCTCCCAGAAAGTCAAGTCAAGTATAAGATATCATTCCATCAACCCAGAATGG AACGAGGAACTCACGTTATCAATCACAAACATGATGCTGCCTGTTAAAATTGAAGTGTTT GACAAGGACACCTTCACCAAGGACGACAGCATGGGCGACGCGGAGTTCGGCATCCTGGAC TTCGTCGAGATCGCCAAGCAGGACCACAGCCATCTCGGCGACGGCGCGGTGATGAAGACG ATCCACCCGGACAAGGAGAACTGCTTCGCGGCGGAGAGCCACATCACATGGAAGGACGGC AAGGTGTCCCAGGACATCGTCCTCAAGCTCAGGAACACCGATACCGGCGAGATCATCCTG CACCTCCAATGGGTTAACATCCCAGGTGTCTCCCGGTGATTCGCCGGCGGCGAGCTTATA TATATATATACACACACAACACACACATATATGTATGTATGTATGTGTGTGTGTGTAATA TACACACACACACACACATGGCTGGTGTGGACACGGTCTATGAGGTATGAAAGATAAGTA AAAAAAAAAAACATCCTGATGAGATCATGAGATCAGTAGGATGGGATAAAAATATGTGAT GCTGATATGCAGCAGGCCTGTGCTACTGGGAGTAATATGCTTGTTTTTCAGTGTTTGGTT CTGC