Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0499800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:18800968:18806189:1 gene:Os07g0499800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Ubiquitin-protein ligase E3 MDM2 domain containing protein. (Os07t0499800-01)
Sequence	ATGGCAACATCTTCGGTGGCCGCCATGCCGCACGACTCCACGCCATGGAGGGACCCCTCC AGGGCATCCTCCAGGCAGCCCGCCAGGGGGTTCTTCAACATCCTCGTCCCGCCGCCGCAG TCGCCGCGCCCGCGCTGCCCCGACCACCAACACCACCACCACCACCACCACCACCACGAT GCTGCTGGTGGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGCCCACGCCGAGGCGG CGGAAGCAGATACTGGATCGGTGGGCGGCGGCGGCGGCGGCCGCGTCCGCCACGGCGTCC GCCGAGGCCCCCGCGCCGCAGGAGCAGAGGCGGAGGGCGAGGGACGCCGAGCTGTCCGCG CTCGCGTCGGCCACCCGCCCCGTGACCGCCCGCGCCGCCGTGTTCCGGGAGCCGTCCCCA GCGCCGTCGGACGCGTCGTCGGGGGCGGGGGCGGGGTGCGGGGGCGGGGCCGGGTGCGGC GCGGAGCTCCCGCCCGCGGCGCCGCGCGCGTCGTCGCTGATCCAGCGGTGGCGGGAGATC GAGGCGGTGGGGCCCGCCACGCCGCGGCCCTGCGACCTGGCCTCCGACTCCGACGGCGGC TCGCCGCGGGGCCGCGTGGGGTGCATCGTCAAGAAGCTCAGCGGCACGTCGTCGATCCCC GACGACGAGCTGGACGCCGCCAACAAGGAGGTCGCGATGTCGCAGTCCGCGCCCCCGTCG CCCGCGCCGATGCGCGCCGGGGTGGAGCCGCCCACCAACATCGCCGGTATCAACGGGTCC AGGCCGACGCAGCTGGTAGTCCGCACGGTGCGTGGCCGCCGCGCAATGGAGGAGCTCGTC GCCATGATGGCCCATTGCCGGAGGTGCGAGCTCGCCGCGGTCGCCGACCGCCACGTCGTG TCGCGGTTCTCGCACAAAGGCAGGATCCAGTCCATGCTTCGTCTTAGGCTGTTGCGTCAG GGATTTAAAGTTAAGGATGAAGTTTGGACTCTACCAAAACCAGTCAGGCCACGCCTTCCA AAACATGAGCATGAGGCCTATACCACAAGCAAGTGCATTGCTGGTAACCAACATAAGGGT GGCCAGGTTTTGGCTGAGAAGTCTACTGGTTCTGTTGAGAGACTAGTTTCTTCGGATGGT TTAGGAAATGAACAAAATGATGGGCAGAACAGCAACAGTGAAAATCAATGTCAGGAAGGT TGCAAAAACATGGTAAAATTATGTACCCAGAATCAGGAATATTCTGAGCCATCGAGTTTC GTGAGGTATGACGAGCATAGTACCGTTGATGATGTCTCGCCAAGTACCATAAGCACATTG CATGAACTTTGCACTCCATCCTCAAGGGGTGATAATCTAAGAGAAGAAGACAACCAAAGC CTGAATGGTTCATGGGAAGAGAGGGCACTATGGATAAGTAGTCTTGGTTGGCCTGCACCA GTGGAAGCCATGAGTCCAGACAGCTGGAATCAGGATGAAATTGGGGATATTGAGAATCAC ACTCAGAATGAATTTAATGATCGCCCCTGGATAGATTCCCCTAACTCATGGAGATCATTG TGTGTTGCCACACAAGCAGACAGCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTT CTTGAGAGCAAAAATGTCTCAAAGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAAC ATGTTGCTAACAATCTTGCGCAAACAAAGGCAACAACACATGATTGATGATTTTGAAGGA TATTATGATGAGCGCTTATACTGGAGACAGAATGATGAACAACAGAATGCTGATCAGAGG GTATCTGCACAGTGTTCATTAGCACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAG CATTCTTCGTTTGAACATCAACATCATGAAAACCAAAACTTCCTTGAAATGGAGGTCAGG GTTAGAAGTGAAATGGCACAGGTCCATCATGAAATATATGAACTACGGAAGTTGGTGGAA AGTTGTATTGCATCCCAAGTAAAGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCA CTTCGCGAAGCAGGGTTGATGCCAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGC TGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTGTGGACATATGTGCACC TGTTTCAATTGCGCCGATCAGCTGAAATCGAGCAACAGGAGTTGCCCAATCTGCCAATCT CCTATTGAGGATGTTGTTCGAGCGCATATGAATTTTTGA

Peptide Sequence

PEP ID	Os07t0499800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:18800968:18806189:1 gene:Os07g0499800 transcript:Os07t0499800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Ubiquitin-protein ligase E3 MDM2 domain containing protein. (Os07t0499800-01)
Sequence	MATSSVAAMPHDSTPWRDPSRASSRQPARGFFNILVPPPQSPRPRCPDHQHHHHHHHHHD AAGGAAAAAAAAAAEPTPRRRKQILDRWAAAAAAASATASAEAPAPQEQRRRARDAELSA LASATRPVTARAAVFREPSPAPSDASSGAGAGCGGGAGCGAELPPAAPRASSLIQRWREI EAVGPATPRPCDLASDSDGGSPRGRVGCIVKKLSGTSSIPDDELDAANKEVAMSQSAPPS PAPMRAGVEPPTNIAGINGSRPTQLVVRTVRGRRAMEELVAMMAHCRRCELAAVADRHVV SRFSHKGRIQSMLRLRLLRQGFKVKDEVWTLPKPVRPRLPKHEHEAYTTSKCIAGNQHKG GQVLAEKSTGSVERLVSSDGLGNEQNDGQNSNSENQCQEGCKNMVKLCTQNQEYSEPSSF VRYDEHSTVDDVSPSTISTLHELCTPSSRGDNLREEDNQSLNGSWEERALWISSLGWPAP VEAMSPDSWNQDEIGDIENHTQNEFNDRPWIDSPNSWRSLCVATQADSGALSGNADICNL LESKNVSKSLESDFSNKMNNMLLTILRKQRQQHMIDDFEGYYDERLYWRQNDEQQNADQR VSAQCSLAPVSHLHQQEGWQHSSFEHQHHENQNFLEMEVRVRSEMAQVHHEIYELRKLVE SCIASQVKIQHSIKEEMCSALREAGLMPSQPDTPAKRGSCCICHQTQVDSLLYRCGHMCT CFNCADQLKSSNRSCPICQSPIEDVVRAHMNF

Transcript Sequence

Transcript ID	Os07t0499800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:18800968:18806189:1 gene:Os07g0499800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Ubiquitin-protein ligase E3 MDM2 domain containing protein. (Os07t0499800-01)
Sequence	GGGGGGGTAGCTGCTACCTTTGGGAGTTGGGTGGCGCCATGGCAACATCTTCGGTGGCCG CCATGCCGCACGACTCCACGCCATGGAGGGACCCCTCCAGGGCATCCTCCAGGCAGCCCG CCAGGGGGTTCTTCAACATCCTCGTCCCGCCGCCGCAGTCGCCGCGCCCGCGCTGCCCCG ACCACCAACACCACCACCACCACCACCACCACCACGATGCTGCTGGTGGCGCGGCGGCGG CGGCGGCGGCGGCGGCGGCGGAGCCCACGCCGAGGCGGCGGAAGCAGATACTGGATCGGT GGGCGGCGGCGGCGGCGGCCGCGTCCGCCACGGCGTCCGCCGAGGCCCCCGCGCCGCAGG AGCAGAGGCGGAGGGCGAGGGACGCCGAGCTGTCCGCGCTCGCGTCGGCCACCCGCCCCG TGACCGCCCGCGCCGCCGTGTTCCGGGAGCCGTCCCCAGCGCCGTCGGACGCGTCGTCGG GGGCGGGGGCGGGGTGCGGGGGCGGGGCCGGGTGCGGCGCGGAGCTCCCGCCCGCGGCGC CGCGCGCGTCGTCGCTGATCCAGCGGTGGCGGGAGATCGAGGCGGTGGGGCCCGCCACGC CGCGGCCCTGCGACCTGGCCTCCGACTCCGACGGCGGCTCGCCGCGGGGCCGCGTGGGGT GCATCGTCAAGAAGCTCAGCGGCACGTCGTCGATCCCCGACGACGAGCTGGACGCCGCCA ACAAGGAGGTCGCGATGTCGCAGTCCGCGCCCCCGTCGCCCGCGCCGATGCGCGCCGGGG TGGAGCCGCCCACCAACATCGCCGGTATCAACGGGTCCAGGCCGACGCAGCTGGTAGTCC GCACGGTGCGTGGCCGCCGCGCAATGGAGGAGCTCGTCGCCATGATGGCCCATTGCCGGA GGTGCGAGCTCGCCGCGGTCGCCGACCGCCACGTCGTGTCGCGGTTCTCGCACAAAGGCA GGATCCAGTCCATGCTTCGTCTTAGGCTGTTGCGTCAGGGATTTAAAGTTAAGGATGAAG TTTGGACTCTACCAAAACCAGTCAGGCCACGCCTTCCAAAACATGAGCATGAGGCCTATA CCACAAGCAAGTGCATTGCTGGTAACCAACATAAGGGTGGCCAGGTTTTGGCTGAGAAGT CTACTGGTTCTGTTGAGAGACTAGTTTCTTCGGATGGTTTAGGAAATGAACAAAATGATG GGCAGAACAGCAACAGTGAAAATCAATGTCAGGAAGGTTGCAAAAACATGGTAAAATTAT GTACCCAGAATCAGGAATATTCTGAGCCATCGAGTTTCGTGAGGTATGACGAGCATAGTA CCGTTGATGATGTCTCGCCAAGTACCATAAGCACATTGCATGAACTTTGCACTCCATCCT CAAGGGGTGATAATCTAAGAGAAGAAGACAACCAAAGCCTGAATGGTTCATGGGAAGAGA GGGCACTATGGATAAGTAGTCTTGGTTGGCCTGCACCAGTGGAAGCCATGAGTCCAGACA GCTGGAATCAGGATGAAATTGGGGATATTGAGAATCACACTCAGAATGAATTTAATGATC GCCCCTGGATAGATTCCCCTAACTCATGGAGATCATTGTGTGTTGCCACACAAGCAGACA GCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTTCTTGAGAGCAAAAATGTCTCAA AGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAACATGTTGCTAACAATCTTGCGCA AACAAAGGCAACAACACATGATTGATGATTTTGAAGGATATTATGATGAGCGCTTATACT GGAGACAGAATGATGAACAACAGAATGCTGATCAGAGGGTATCTGCACAGTGTTCATTAG CACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAGCATTCTTCGTTTGAACATCAAC ATCATGAAAACCAAAACTTCCTTGAAATGGAGGTCAGGGTTAGAAGTGAAATGGCACAGG TCCATCATGAAATATATGAACTACGGAAGTTGGTGGAAAGTTGTATTGCATCCCAAGTAA AGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCACTTCGCGAAGCAGGGTTGATGC CAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAG TTGACTCTCTACTTTACAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGC TGAAATCGAGCAACAGGAGTTGCCCAATCTGCCAATCTCCTATTGAGGATGTTGTTCGAG CGCATATGAATTTTTGAGGTTTAGGTCTTAGGAGGAAGAAGAGCTGCCACTCTATAGCTT TAGATGTGGAGTTTGTGAAGCCCTGGTTTTGAGGAGGCTTCTTGAATCACCTTCATTAAC AACCAAAAGTATACGAGCTAGCGTTTCTTGAGAAATGTAAATATGTTTTGTGCAAGCGCA ATGTGTACTAAGTACTGACAGAAAGGAACAAACGAAATATCTAATCCAAATGCTGATCTT GTTTCTGATCATTTTTCTTGCTTTCCTTTGTTTCTTTTAAGTTCTGTATTGAACATGTTT GTAGCCTTCAGTTCTGATAATGGGCTTGTCTTGTTTTCTGTTG