Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0495900-03
CDS Infomation	cds chromosome:IRGSP-1.0:7:18559543:18565200:1 gene:Os07g0495900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to low-level beta-amylase 1. (Os07t0495900-01);Similar to predicted protein. (Os07t0495900-02);Similar to predicted protein. (Os07t0495900-03);Similar to predicted protein. (Os07t0495900-04)
Sequence	GTCAGGCTATGTGCAAAATCTAGGGAAGCTGTTTCATCTCCTGTTGAGCATTTGACACTT CATTATCAGGTTCGGCACCTTGATACATCTGAAAAGAGTGAATTGCATAAGCTACAGCAA CTCAAAGATGAACAAGGTGAATTGTCAAGCAGTGATGAGAAAAAGTACAAGGCATTAAAA CGAGCTACTGAGAGAGAGATATTACAAAGTGCTGATGTGATTTGTTGCACTTGTGTTGGT GCTGGAGACCCTCGTTTAGCAAACTTCCGATTCCGTCAAGTTCTTATTGATGAATCTACA CAGGCAACAGAGCCTGAATGTCTCATTCCATTGGTGCTTGGTGTAAAGCAGGTTGTTCTT GTTGGAGATCATTGTCAACTGGGCCCAGTCATCATGTGCAAAAAGGCAGCTCGTGCAGGA TTAGCACAATCGCTCTTTGAACGGCTTGTTATCCTTGGAGTCAAGCCTTTCAGGCTACAG GTACAATATAGGATGCACCCTTGTCTTTCAGACTTCCCGTCCAACTGCTTCTATGAAGGC ACACTGCAAAATGGAGTAACTGTAAACGAGAGACAGACACCTGGGATTGATTTTCCTTGG CCTGTTCCAAATCGGCCTATGTTCTTCTACGTGCAGATGGGACAAGAAGAGATCAGTGCC AGTGGGACATCATACCTCAATAGAACTGAAGCTGCAAATGTTGAAAAGATTGTAACTACA TTTTTAAGGAGTGGTGTTGTACCAAGCCAGATTGGAGTTATCACACCTTATGAAGGACAA AGGGCATATATTGTGAATTATATGTCAAGGAATGGCTCTCTTCGCCAACAACTATACAAA GAAATTGAGGTAGCAAGTGTTGATTCCTTCCAGGGAAGAGAAAAAGATTACATAATCCTG TCTTGTGTTAGAAGCAATGAGCACCAGGGTATTGGGTTTCTTAATGATCCACGCAGGTTA AATGTCGCATTAACTCGTGCTCGGTACGGTATAGTTATTCTTGGGAACCCTAAAGTTCTA AGCAAGCAGCCACTCTGGAATAGTTTATTGACACATTATAAGGAGCATGAGTGTTTGGTA GAAGGACCTTTGAACAACTTAAAGCAGAGTATGGTGCAATTTCAAAAGCCAAAAAAGATC TACAATGATCGACGACTCTTCCTGGGTGGCGGTCAAGGTGTTATGCAAGGAGCTAGTTTT GGTGCTGCAGGCACAAACCCAGTGGCAGATAAGAGAAGTGGTAGGGGGAAAGGGCATTCC TTTGTTCCATTTGGCCCACCAAATGGGGCTCATAAACCTGGTGTGCACCCATCTGGCTAT CCTTTACCTCGTATGCCTTTCCCTCCATTTGCTGGGGCTCATTCTCAACCCTATGCTATT CCAACCCGGGGATCATTGCACGGACCGATTGGAGCTGTTCCACCTGTGCCTCAACCTGGA AACAGAAACTTTGGACCTCGTGGAAATACTGGTGGCCCTATTGGTGGGCACCTTGCTCAC CAACAGAGTTCTCAGCAAGCTATGGGAGGCATGGGGTCAGCTTTTAACTTTCCTGGCCTG GAGAATCCGAGCAGTCAGCCTTCTGGTGGAGGTCCAATGTCCCAGACTGGATTGATGACA CAGATGCCTGTCCAAGGTCTCAGTCAAACATTCCGCGATGGGTTTTCCATTGGTGGGATG TCTCAGGACTTCTTTGGAGATGATTTCAAGAGCCAAGGATCTCATGTGGCATACAACATT GCTGATTTTTCCACTCAGGCTTCTCAAGGAGGCTATGGTGTTGACTACTCTCAAGGACCC CAATCTGGATATCCTGGGAATTATTTGAACCAAAATGCACACCCAGGGTATTCCCATATG GGTGCAGCAAATGACATTGTCTCTCAGGATCACATGGCCCATGGTTCACATGGAATGTTT ACACAAGCGGGATACAATGACTCTTCACAAGATGAGTCATCACAGATGCATTTTGGAATG GCTGGTCCTGGTCTTCAGTCTCAGCCCATGATGAACCCGCTCTACTCTCAGTCATATGCT CATTACAACACCCAACCGCAGTCTCTCCAACCTCCTCCCCAGTGA

Peptide Sequence

PEP ID	Os07t0495900-03
PEP Infomation	pep chromosome:IRGSP-1.0:7:18559543:18565200:1 gene:Os07g0495900 transcript:Os07t0495900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to low-level beta-amylase 1. (Os07t0495900-01);Similar to predicted protein. (Os07t0495900-02);Similar to predicted protein. (Os07t0495900-03);Similar to predicted protein. (Os07t0495900-04)
Sequence	VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK RATEREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVL VGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEG TLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTT FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIIL SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLV EGPLNNLKQSMVQFQKPKKIYNDRRLFLGGGQGVMQGASFGAAGTNPVADKRSGRGKGHS FVPFGPPNGAHKPGVHPSGYPLPRMPFPPFAGAHSQPYAIPTRGSLHGPIGAVPPVPQPG NRNFGPRGNTGGPIGGHLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQTGLMT QMPVQGLSQTFRDGFSIGGMSQDFFGDDFKSQGSHVAYNIADFSTQASQGGYGVDYSQGP QSGYPGNYLNQNAHPGYSHMGAANDIVSQDHMAHGSHGMFTQAGYNDSSQDESSQMHFGM AGPGLQSQPMMNPLYSQSYAHYNTQPQSLQPPPQ

Transcript Sequence

Transcript ID	Os07t0495900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:18559543:18565200:1 gene:Os07g0495900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to low-level beta-amylase 1. (Os07t0495900-01);Similar to predicted protein. (Os07t0495900-02);Similar to predicted protein. (Os07t0495900-03);Similar to predicted protein. (Os07t0495900-04)
Sequence	TTGTCAGGCTATGTGCAAAATCTAGGGAAGCTGTTTCATCTCCTGTTGAGCATTTGACAC TTCATTATCAGGTTCGGCACCTTGATACATCTGAAAAGAGTGAATTGCATAAGCTACAGC AACTCAAAGATGAACAAGGTGAATTGTCAAGCAGTGATGAGAAAAAGTACAAGGCATTAA AACGAGCTACTGAGAGAGAGATATTACAAAGTGCTGATGTGATTTGTTGCACTTGTGTTG GTGCTGGAGACCCTCGTTTAGCAAACTTCCGATTCCGTCAAGTTCTTATTGATGAATCTA CACAGGCAACAGAGCCTGAATGTCTCATTCCATTGGTGCTTGGTGTAAAGCAGGTTGTTC TTGTTGGAGATCATTGTCAACTGGGCCCAGTCATCATGTGCAAAAAGGCAGCTCGTGCAG GATTAGCACAATCGCTCTTTGAACGGCTTGTTATCCTTGGAGTCAAGCCTTTCAGGCTAC AGGTACAATATAGGATGCACCCTTGTCTTTCAGACTTCCCGTCCAACTGCTTCTATGAAG GCACACTGCAAAATGGAGTAACTGTAAACGAGAGACAGACACCTGGGATTGATTTTCCTT GGCCTGTTCCAAATCGGCCTATGTTCTTCTACGTGCAGATGGGACAAGAAGAGATCAGTG CCAGTGGGACATCATACCTCAATAGAACTGAAGCTGCAAATGTTGAAAAGATTGTAACTA CATTTTTAAGGAGTGGTGTTGTACCAAGCCAGATTGGAGTTATCACACCTTATGAAGGAC AAAGGGCATATATTGTGAATTATATGTCAAGGAATGGCTCTCTTCGCCAACAACTATACA AAGAAATTGAGGTAGCAAGTGTTGATTCCTTCCAGGGAAGAGAAAAAGATTACATAATCC TGTCTTGTGTTAGAAGCAATGAGCACCAGGGTATTGGGTTTCTTAATGATCCACGCAGGT TAAATGTCGCATTAACTCGTGCTCGGTACGGTATAGTTATTCTTGGGAACCCTAAAGTTC TAAGCAAGCAGCCACTCTGGAATAGTTTATTGACACATTATAAGGAGCATGAGTGTTTGG TAGAAGGACCTTTGAACAACTTAAAGCAGAGTATGGTGCAATTTCAAAAGCCAAAAAAGA TCTACAATGATCGACGACTCTTCCTGGGTGGCGGTCAAGGTGTTATGCAAGGAGCTAGTT TTGGTGCTGCAGGCACAAACCCAGTGGCAGATAAGAGAAGTGGTAGGGGGAAAGGGCATT CCTTTGTTCCATTTGGCCCACCAAATGGGGCTCATAAACCTGGTGTGCACCCATCTGGCT ATCCTTTACCTCGTATGCCTTTCCCTCCATTTGCTGGGGCTCATTCTCAACCCTATGCTA TTCCAACCCGGGGATCATTGCACGGACCGATTGGAGCTGTTCCACCTGTGCCTCAACCTG GAAACAGAAACTTTGGACCTCGTGGAAATACTGGTGGCCCTATTGGTGGGCACCTTGCTC ACCAACAGAGTTCTCAGCAAGCTATGGGAGGCATGGGGTCAGCTTTTAACTTTCCTGGCC TGGAGAATCCGAGCAGTCAGCCTTCTGGTGGAGGTCCAATGTCCCAGACTGGATTGATGA CACAGATGCCTGTCCAAGGTCTCAGTCAAACATTCCGCGATGGGTTTTCCATTGGTGGGA TGTCTCAGGACTTCTTTGGAGATGATTTCAAGAGCCAAGGATCTCATGTGGCATACAACA TTGCTGATTTTTCCACTCAGGCTTCTCAAGGAGGCTATGGTGTTGACTACTCTCAAGGAC CCCAATCTGGATATCCTGGGAATTATTTGAACCAAAATGCACACCCAGGGTATTCCCATA TGGGTGCAGCAAATGACATTGTCTCTCAGGATCACATGGCCCATGGTTCACATGGAATGT TTACACAAGCGGGATACAATGACTCTTCACAAGATGAGTCATCACAGATGCATTTTGGAA TGGCTGGTCCTGGTCTTCAGTCTCAGCCCATGATGAACCCGCTCTACTCTCAGTCATATG CTCATTACAACACCCAACCGCAGTCTCTCCAACCTCCTCCCCAGTGATCAGGAAAGCTTG TGATATAATTGCTGAAGCCGCATTAAGTTTTGGAAGTTTGATGGGTTGTATCCTTGGCCC ACAGCAGCTTGGTTGTGCCTTTCTGCACTGTAATGCAGAAACGATGGTGCATAGACATCA GTTGCAAGTATTGGGCACAAGCATATGTTGGAGCACTACATGGATATTTATTGAGGCAAG CTTTGTACAAGATGGCTATGGCTGTCGACCATTGACCATTGCTGAGGAGCACAAGGATTG CAACACATCTCTTTCTTGTCATGGTAGTTCACAGTGGGGCTTGACAACAAGAGGTGGCAA CTTGTGCACTGAGAGATGCTGACGACGCTACCCACATCGCTTCACCTGTATAGAAGACAA AATGGAGCTTATAGTGGTACGATGTCAATACTTCAGGATTGGCTGGCGCCGTGAAGTCTA AGGTGCAGCCGCTATCGCCTGCCTCCATGGTACCACGAAAACGCTTGCAGATTGGCTTTG TATAGGGGTATAGATGGGGGGTGGCCAGCCCTTTCAGAACTCTCGCACATGGCCATTATA TTTATCTGAACATTATGTATGCTTTCTTTATAGTTTTTGATATTTAGGTTCACAGAAATG ATGTTTGGTGATCTTGCCTGAAAGAACGAATGCTAGAGCTTGTAGTCATTGATGGAGATC GCGTGATTTTCTTTTTTGGATCAGCTGTCATTTTATGGAGCTGGCTGGATGCTGGTAAAC CCGTGATGGGTTTTCTGCGTGGTTGATTCCACAACCGTGAGAGCAAATGTTCTGTCACAT GTTTTGATAATACTATATTTGGCCTGTGTTCTGCTGCG