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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0490700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:18250777:18252633:1 gene:Os07g0490700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Snf7 family protein. (Os07t0490700-01)
Sequence

ATGTTCGCCTGGCTCCTCCGCGGCTGCCGCGACGAGTGCTCCGCCTCCGACCAGCTCAAG
CAGGCCCGTGATGTCTTCGTGGCAAAAGAGGCAGTTCTGCAAAAGAAGATCTCTCAGGAG
ATGGAACGTGCCAAGGAGTTCACAAAATCAGGAAATAAGCAAGCAGCAATGCAGTGCTTG
AAGAGGAAGAAATACTATGAAAGCCAAATGAATCAGGTTGGAAGTGTCCAGTTGCGCATT
AATACCAAGGAGAAGATGATTGCTGATCATAGCGGGAATAAAGAAGACAAGTGA

Peptide Sequence

PEP ID

Os07t0490700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:18250777:18252633:1 gene:Os07g0490700 transcript:Os07t0490700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Snf7 family protein. (Os07t0490700-01)
Sequence

MFAWLLRGCRDECSASDQLKQARDVFVAKEAVLQKKISQEMERAKEFTKSGNKQAAMQCL
KRKKYYESQMNQVGSVQLRINTKEKMIADHSGNKEDK

Transcript Sequence

Transcript ID

Os07t0490700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:18250777:18252633:1 gene:Os07g0490700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Snf7 family protein. (Os07t0490700-01)
Sequence

GTGACAAAGTCAGTGGCAAATCGTAGACGTGCGACAAAGTCAGTGGCATATAATGGATTA
TCTCTTAAAAAAATCAAAACGGAGAGGCCCACTTGCCATCCCCATATGCTTTTTCCTTTA
TTTTTCCTGCTCTAATTTTTCCCCTTTCCTCCTCGGCCGTTGCCGTTGCCGTTGCTCCCC
ACCATCTTTCTCTCTCTCTCTCTCTCTCTCCTCCTGCCAGTAGCCGCTGCCGCCGCCGGC
GAGCGATTCCGCGGTGATGTTCGCCTGGCTCCTCCGCGGCTGCCGCGACGAGTGCTCCGC
CTCCGACCAGCTCAAGCAGGCCCGTGATGTCTTCGTGGCAAAAGAGGCAGTTCTGCAAAA
GAAGATCTCTCAGGAGATGGAACGTGCCAAGGAGTTCACAAAATCAGGAAATAAGCAAGC
AGCAATGCAGTGCTTGAAGAGGAAGAAATACTATGAAAGCCAAATGAATCAGGTTGGAAG
TGTCCAGTTGCGCATTAATACCAAGGAGAAGATGATTGCTGATCATAGCGGGAATAAAGA
AGACAAGTGAAATCAGAGTTCTGAATGTATGCCTCTTTCTGTTACTTATATTTGCTTGGA
TCAGATACATAATCTTGTGTGGTTAGCATAGTGTAGCATAGTTTCTTTTACCAACAATGC
AAATTGAATTTAACATTGATGTGCCCTTCCATAATTTATGAAAGTGGCTGCTTTAGATCT
TTGTTCTTTCACTCTTTATTGGAGAAAAGTGAATCTCATAAACTGCAGTGTTTATGATTT
ATGTGAACCATGAGCATAAAATTTCATTTGGATTCTC