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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0484200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:17740777:17742290:1 gene:Os07g0484200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 9 description:Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1). (Os07t0484200-01)
Sequence

ATGGCGAATTCTGCGTCAGGGCTGGCGGTGAACGACGAGTGCAAGTTCAAGTTCCAGGAG
CTGAAGACGAGGAGGGGGTTCAGGTTCATCGTGTTCAAGATCGACGACAAGGCCATGGAG
ATCAAGGTGGAGAGGCTCGGGCAGACTGCCGAGGGCTACGAGGACTTCGCCGCCACCCTC
CCCGCCGACGAGTGCCGCTACGCCGTCTACGACCTCGACTTCGTCACCGACGAGAACTGC
CAGAAGAGCAAGATCTTCTTCTTCTCCTGGTCGCCTGACACGGCGAGGACAAGGAGCAAG
ATGCTGTACGCGAGCTCCAAGGACAGGTTCAGGAGGGAGCTGGACGGAATCCAGTGCGAG
ATTCAGGCCACAGACCCCAGCGAGATGAGCCTCGACATCATCAGAGCCAGAGCTCACTGA

Peptide Sequence

PEP ID

Os07t0484200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:17740777:17742290:1 gene:Os07g0484200 transcript:Os07t0484200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 9 description:Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1). (Os07t0484200-01)
Sequence

MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL
PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE
IQATDPSEMSLDIIRARAH

Transcript Sequence

Transcript ID

Os07t0484200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:17740777:17742290:1 gene:Os07g0484200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 9 description:Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1). (Os07t0484200-01)
Sequence

AACCTCTCCCTCCATTCGCATTACCGCGCAAAGGAGGAAGAAGAAGAAGAACTCACTCGC
AGGAGCACCAATGGCGAATTCTGCGTCAGGGCTGGCGGTGAACGACGAGTGCAAGTTCAA
GTTCCAGGAGCTGAAGACGAGGAGGGGGTTCAGGTTCATCGTGTTCAAGATCGACGACAA
GGCCATGGAGATCAAGGTGGAGAGGCTCGGGCAGACTGCCGAGGGCTACGAGGACTTCGC
CGCCACCCTCCCCGCCGACGAGTGCCGCTACGCCGTCTACGACCTCGACTTCGTCACCGA
CGAGAACTGCCAGAAGAGCAAGATCTTCTTCTTCTCCTGGTCGCCTGACACGGCGAGGAC
AAGGAGCAAGATGCTGTACGCGAGCTCCAAGGACAGGTTCAGGAGGGAGCTGGACGGAAT
CCAGTGCGAGATTCAGGCCACAGACCCCAGCGAGATGAGCCTCGACATCATCAGAGCCAG
AGCTCACTGATGATCATATCATTTCATCATCCAACACCACCAGATTAATTAATTCATTCC
CAACGTCGATCGCCTTATTCAACCCCAGATCCATGCATATATATATGCCCATGGGTTAAT
ATATCATCAATTATGGGGTTTATGTCCGCTTAAATTTACCCTACGTACGTTTTGATCCTC
GCAAAAAAAAACACATACATATATATATATACCGTTTTGATCGACTATTTATACGTTGTT
ATACGACATTGATGTCGTCCAAGTATTATTATCCTATTATATATAATTCCTTCATTTCAT
TCTATTTTTCTTCTGCTTATATCTTCAACTTTTCATTTTTGTAATTTGTAAGTTGTATTG
ATGCAATTTGTTGGCAACAAGAATACACTTTTTCTATTCATGT