Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0477500-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:17277620:17283511:1 gene:Os07g0477500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylation protein Rxt3 domain containing protein. (Os07t0477500-01)
Sequence	ATGAGTGGTGCACCCAAGAGGTCGCATGAGGAGGGTAGTCACTCCACACCGGCAAAACGG CCGTTGGATGACAGCAGCTTGTACTCAAGCCCTTCTGGGAAAATTATTCAACCAGGCAGC AGTGATTTCCATGGTTCGTTTGAACATGATGGGAGATTTGCCAAAGTTCAACGTATTGAG CCCCGGGATGATAAGAGGCCCTCTCTGGCACATAGGATGCCTATTGGCCCCTCCAACTTT GTGGACCACTCAATCTCATCTGATGGCAGATTAGAATCAAAGCAAAATAAAGATCCATGG GACACTAAGGTAGATGTTCGGGAGGCAAAGGCTGACACTCGAGATGTCTACAGTGATCCC AGGGTTGAATTTCCGAGCAATAAAGTTGAGACTGATGTAAAGACGGACAATAGAGCAGAT GACAATGACATAAGAGCCGACAGACGGATACATGCTGACTACAAAGGTGATGCCAAACTG GACAAAGATGGTCATCCTACAGCAATTTCAAACATAGCCTGGAAAGATAACAAAGAACAT AGGGGTAAAAGGAATATTGAGCAGCCATCTGATAATGCAGATTGGCGTTTTCCCCGCCCT GGTTTGCAAGGAACAGATGAATCTTCCAAAGGTCCAGTTCCTGCAGATGAGCGGTCCAAG GATGCTCATGAATCTACTGGTGAGAATAAAACTGAACCTAAAACTGAAGATAAGTTTAGA GATAAGGACAGGAAAAAGAAGGATGAAAAGCATAGGGACTTCGGCACAAGAGACAATGAT AGAAATGATCGCCGAATTGGTATTCAGCTTGGAGGCAATAGTGTTGAACGAAGAGAGAAT CAGAGGGAAGATAGGGATGCTGAAAAGTGGGATAGGGAAAGAAAAGATTCCCAGAAGGAC AAGGAAGGCAATGATAGAGAGAAGGATTCTGCAAAGGAGTCATCAGTAGCAACTGAAAAG GAGAATGCAATACTGGAAAAAACTGCATCTGATGGAGCTGTTAAAAGTGCCGAGCATGAG AATAAAACAGTAGAGCAGAAGACACTTAAAGATGATGCATGGAAATCACATGATAGGGAT CCCAAGGACAAGAAAAGAGAGAAGGATATGGATGCAGGAGAAAGGCACGACCAAAGGAGT AAATATAATGACAAGGAATCAGATGATACTTGCCCTGAAGGAGATATAGAGAAGGATAAG GAAGCCCTTGGAAGTGTCCAACGCAAGAGAATGGCGCGATCAAGGGGTGGTAGTCAAGCA TCCCAACGAGAACCTCGATTTAGGTCTAGGATGCGTGATGGTGAAGGATCTCAAGGTAAA TCTGAGGCATCAGCCATTGTCTATAAAGCTGGTGAGTGCATGCAAGAGCTTCTGAAATCA TGGAAAGAGTTTGAAGCAACCCCAGAAGCTAAAAGTGCTGAAAGTGTGCAAAATGGCCCC ACTCTTGAGATCCGCATACCCGCAGAGTTTGTTACGTCCACTAACCGTCAAGTAAAAGGT GCTCAACTTTGGGGAACGGATATTTATACAAATGATTCAGATCTTGTCGCTGTGCTTATG CATACTGGTTACTGCTCCCCTACATCATCACCTCCACCATCTGCAATCCAAGAGCTACGA GCAACTGTTCGAGTTCTACCGCCACAAGACAGCTATACTTCAACTTTAAGGAACAATGTC CGCTCACGTGCTTGGGGTGCTGGTATTGGTTGTAGCTTTCGCATAGAACGCTGCTGCATT GTTAAGAAAGGTGGTGGTACTATTGATCTTGAGCCTCGCCTAAGCCATACATCAGCTGTG GAGCCTACACTTGCTCCGGTTGCGGTTGAGCGCACAATGACAACAAGAGCAGCAGCTTCT AATGCGTTACGTCAACAAAGATTTGTTCGGGAAGTCACAATACAGTACAATCTCTGCAAC GAGCCATGGTTGAAATACAGCATAAGCATTGTGGCAGACAAGGGATTGAAAAAGTCATTA TATACTTCTGCGAGGCTGAAAAAAGGCGAAGTCATATACTTGGAAACACATTATAATAGG TATGAGCTGTGCTTCAGTGGAGAAAAGGCTCGTCTTGTTGGATCAAGCTCCAATGCGGCA GACGCAGAAACTGAGAAACACCAGAATAGTAGCCACCATCACTCGCAAAATGGGGACAGG GCCTCTTCAGAACATGAACTGCGGGATTTGTTCCGATGGTCCCGCTGTAAGAAGGCGATG CCTGAGAGCTCTATGCGCTCCATCGGTATCCCGCTGCCAGCTGATCAACTTGAGGTGCTG CAGGATAATTTGGAATGGGAGGATGTGCAGTGGTCGCAGACTGGTGTTTGGGTTGCTGGA AAGGAATATCCTCTCGCCCGAGTGCATTTCCTATCATCAAACTAG

Peptide Sequence

PEP ID	Os07t0477500-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:17277620:17283511:1 gene:Os07g0477500 transcript:Os07t0477500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylation protein Rxt3 domain containing protein. (Os07t0477500-01)
Sequence	MSGAPKRSHEEGSHSTPAKRPLDDSSLYSSPSGKIIQPGSSDFHGSFEHDGRFAKVQRIE PRDDKRPSLAHRMPIGPSNFVDHSISSDGRLESKQNKDPWDTKVDVREAKADTRDVYSDP RVEFPSNKVETDVKTDNRADDNDIRADRRIHADYKGDAKLDKDGHPTAISNIAWKDNKEH RGKRNIEQPSDNADWRFPRPGLQGTDESSKGPVPADERSKDAHESTGENKTEPKTEDKFR DKDRKKKDEKHRDFGTRDNDRNDRRIGIQLGGNSVERRENQREDRDAEKWDRERKDSQKD KEGNDREKDSAKESSVATEKENAILEKTASDGAVKSAEHENKTVEQKTLKDDAWKSHDRD PKDKKREKDMDAGERHDQRSKYNDKESDDTCPEGDIEKDKEALGSVQRKRMARSRGGSQA SQREPRFRSRMRDGEGSQGKSEASAIVYKAGECMQELLKSWKEFEATPEAKSAESVQNGP TLEIRIPAEFVTSTNRQVKGAQLWGTDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELR ATVRVLPPQDSYTSTLRNNVRSRAWGAGIGCSFRIERCCIVKKGGGTIDLEPRLSHTSAV EPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWLKYSISIVADKGLKKSL YTSARLKKGEVIYLETHYNRYELCFSGEKARLVGSSSNAADAETEKHQNSSHHHSQNGDR ASSEHELRDLFRWSRCKKAMPESSMRSIGIPLPADQLEVLQDNLEWEDVQWSQTGVWVAG KEYPLARVHFLSSN

Transcript Sequence

Transcript ID	Os07t0477500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:17277620:17283511:1 gene:Os07g0477500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylation protein Rxt3 domain containing protein. (Os07t0477500-01)
Sequence	AGTTTTTGCCCTTGATTTGATCCCCCAATTCATTCCATCCCGCGACCGAGCTGGGCGTCA GCGCCGTCGTTCGTCCCTGCTGCTTCCGCCGTCGCATCCCATCCTCATCCTCCGCCACCG CCGCCTGCGCCGATCCCCATCCATCCATCCACCCAGCGACCGACCGACCGAGCAGGGTCG CCGTCGTTCGTACGGCTGCTTCCTCGCCGCATCCATCCATCCATCCATCCTGTGCATTGT GTCAAAGGCATTGGGCTATATCCTTTTGTATTTGTGTTTCTTGGTTCATATTGAAGGACT GTTGACATTTTTGAGGGAAAATGAGTGGTGCACCCAAGAGGTCGCATGAGGAGGGTAGTC ACTCCACACCGGCAAAACGGCCGTTGGATGACAGCAGCTTGTACTCAAGCCCTTCTGGGA AAATTATTCAACCAGGCAGCAGTGATTTCCATGGTTCGTTTGAACATGATGGGAGATTTG CCAAAGTTCAACGTATTGAGCCCCGGGATGATAAGAGGCCCTCTCTGGCACATAGGATGC CTATTGGCCCCTCCAACTTTGTGGACCACTCAATCTCATCTGATGGCAGATTAGAATCAA AGCAAAATAAAGATCCATGGGACACTAAGGTAGATGTTCGGGAGGCAAAGGCTGACACTC GAGATGTCTACAGTGATCCCAGGGTTGAATTTCCGAGCAATAAAGTTGAGACTGATGTAA AGACGGACAATAGAGCAGATGACAATGACATAAGAGCCGACAGACGGATACATGCTGACT ACAAAGGTGATGCCAAACTGGACAAAGATGGTCATCCTACAGCAATTTCAAACATAGCCT GGAAAGATAACAAAGAACATAGGGGTAAAAGGAATATTGAGCAGCCATCTGATAATGCAG ATTGGCGTTTTCCCCGCCCTGGTTTGCAAGGAACAGATGAATCTTCCAAAGGTCCAGTTC CTGCAGATGAGCGGTCCAAGGATGCTCATGAATCTACTGGTGAGAATAAAACTGAACCTA AAACTGAAGATAAGTTTAGAGATAAGGACAGGAAAAAGAAGGATGAAAAGCATAGGGACT TCGGCACAAGAGACAATGATAGAAATGATCGCCGAATTGGTATTCAGCTTGGAGGCAATA GTGTTGAACGAAGAGAGAATCAGAGGGAAGATAGGGATGCTGAAAAGTGGGATAGGGAAA GAAAAGATTCCCAGAAGGACAAGGAAGGCAATGATAGAGAGAAGGATTCTGCAAAGGAGT CATCAGTAGCAACTGAAAAGGAGAATGCAATACTGGAAAAAACTGCATCTGATGGAGCTG TTAAAAGTGCCGAGCATGAGAATAAAACAGTAGAGCAGAAGACACTTAAAGATGATGCAT GGAAATCACATGATAGGGATCCCAAGGACAAGAAAAGAGAGAAGGATATGGATGCAGGAG AAAGGCACGACCAAAGGAGTAAATATAATGACAAGGAATCAGATGATACTTGCCCTGAAG GAGATATAGAGAAGGATAAGGAAGCCCTTGGAAGTGTCCAACGCAAGAGAATGGCGCGAT CAAGGGGTGGTAGTCAAGCATCCCAACGAGAACCTCGATTTAGGTCTAGGATGCGTGATG GTGAAGGATCTCAAGGTAAATCTGAGGCATCAGCCATTGTCTATAAAGCTGGTGAGTGCA TGCAAGAGCTTCTGAAATCATGGAAAGAGTTTGAAGCAACCCCAGAAGCTAAAAGTGCTG AAAGTGTGCAAAATGGCCCCACTCTTGAGATCCGCATACCCGCAGAGTTTGTTACGTCCA CTAACCGTCAAGTAAAAGGTGCTCAACTTTGGGGAACGGATATTTATACAAATGATTCAG ATCTTGTCGCTGTGCTTATGCATACTGGTTACTGCTCCCCTACATCATCACCTCCACCAT CTGCAATCCAAGAGCTACGAGCAACTGTTCGAGTTCTACCGCCACAAGACAGCTATACTT CAACTTTAAGGAACAATGTCCGCTCACGTGCTTGGGGTGCTGGTATTGGTTGTAGCTTTC GCATAGAACGCTGCTGCATTGTTAAGAAAGGTGGTGGTACTATTGATCTTGAGCCTCGCC TAAGCCATACATCAGCTGTGGAGCCTACACTTGCTCCGGTTGCGGTTGAGCGCACAATGA CAACAAGAGCAGCAGCTTCTAATGCGTTACGTCAACAAAGATTTGTTCGGGAAGTCACAA TACAGTACAATCTCTGCAACGAGCCATGGTTGAAATACAGCATAAGCATTGTGGCAGACA AGGGATTGAAAAAGTCATTATATACTTCTGCGAGGCTGAAAAAAGGCGAAGTCATATACT TGGAAACACATTATAATAGGTATGAGCTGTGCTTCAGTGGAGAAAAGGCTCGTCTTGTTG GATCAAGCTCCAATGCGGCAGACGCAGAAACTGAGAAACACCAGAATAGTAGCCACCATC ACTCGCAAAATGGGGACAGGGCCTCTTCAGAACATGAACTGCGGGATTTGTTCCGATGGT CCCGCTGTAAGAAGGCGATGCCTGAGAGCTCTATGCGCTCCATCGGTATCCCGCTGCCAG CTGATCAACTTGAGGTGCTGCAGGATAATTTGGAATGGGAGGATGTGCAGTGGTCGCAGA CTGGTGTTTGGGTTGCTGGAAAGGAATATCCTCTCGCCCGAGTGCATTTCCTATCATCAA ACTAGCCCCTGCAAGTCCTTCAAGTTGTCGTAGCAGCCGGTTCATGAACTAATTTCTCGC AACAATTTAAGGCAGGAGCTTCTCTTTGGTCCATGTCGCGGTTTTATTGTACAATGTACA ATGCATCCATGCCATGTCTGTGTATAAATCAAGAATGCTCAGCTGCTGTAGGCTGTGTTG TGTGTAGTATTTTTTCCCCCTTTTTTCATAAACTATTTGAGTTCTAGTTGGGCTGCTTCT GCCCCATGTCACTGAGATGTAGCTGTTGCTTCACAATTTAGCTAACCTGATGATTATTGT TGAATGGTTGATGTGCTGTAACTTAATTCAGTGCTGTGTTC