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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0476900-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:17268782:17269949:1 gene:Os07g0476900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin CDSP32, Trx CDSP32 description:Thioredoxin domain 2 containing protein. (Os07t0476900-01)
Sequence

ATGGCATCCACCGCCGCCTTCCTGTCCACGCTCGCCGGCTCGACCAGCCTGGGCGGCGCC
ACGCCGGCCAGCGGCGGCGGGAGCGGGAGGAGCAAGACGGCGAGGTTCTTGAGGAGGCGG
CGGCGCGGCGGCGCGGTGAGGGCGGCGGTGTCCGGCACGGAGCAGGCGCCGGAGACGACG
AAGAAGAAGGGCGGCGGCGGCGGCGGCGGGGACGAGCGGGTGGTGCAGGTGCACAGCGCG
GAGGAGCTCGACGGCGCGCTGCGGGCGGCGAAGGAGCGGCTGGTGGTGGTGGAGTTCGCG
GCGAGCCACAGCGTGAACAGCAGCCGCATCTACCCGTGCATGGTGGAGCTGAGCCGCACC
TGCGGCGACGTCGACTTCCTCCTCGTCATGGGCGACGAGTCGGACGCCACCCGGGAGCTG
TGCCGCCGGGAGGGGATCACCGCCGTGCCCCACTTCACCTTCTACAAGGGCGCCGAGAAG
GTCCACGAGGAGGAGGGGATCGGCCCCGACCAGCTCGCCGGCGACGTCCTCTACTACGGC
GACCACCACTCCGCCGTCGTCCAGCTCCACTCCCGCGCCGACGTCGAGTCCCTCATCTCC
GACCACCGCGGCGAGGGCGGCAAGCTGGTGGTGCTCGACGTGGGGCTCAAGCGATGCGGG
CCCTGCGTGAAGGTGTACCCCACCGTCGTGAAGCTGTCGCGCACCATGGCCGACACCACC
GTCTTCGCCCGCATGAACGGCGACGAGAACGACAGCTGCATGGAGTTCCTCCGCGACATG
GACGTCGTCGAGGTGCCCACCTTCCTCTTCATCAGGGACGGCGACATCGTCGGCCGCTAC
GTCGGCTCCGGCAGGGGGGAGCTCATCGGCGAGATCCTCAGATACAACGGCGTCAAGGTC
ACCTAG

Peptide Sequence

PEP ID

Os07t0476900-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:17268782:17269949:1 gene:Os07g0476900 transcript:Os07t0476900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin CDSP32, Trx CDSP32 description:Thioredoxin domain 2 containing protein. (Os07t0476900-01)
Sequence

MASTAAFLSTLAGSTSLGGATPASGGGSGRSKTARFLRRRRRGGAVRAAVSGTEQAPETT
KKKGGGGGGGDERVVQVHSAEELDGALRAAKERLVVVEFAASHSVNSSRIYPCMVELSRT
CGDVDFLLVMGDESDATRELCRREGITAVPHFTFYKGAEKVHEEEGIGPDQLAGDVLYYG
DHHSAVVQLHSRADVESLISDHRGEGGKLVVLDVGLKRCGPCVKVYPTVVKLSRTMADTT
VFARMNGDENDSCMEFLRDMDVVEVPTFLFIRDGDIVGRYVGSGRGELIGEILRYNGVKV
T

Transcript Sequence

Transcript ID

Os07t0476900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:17268782:17269949:1 gene:Os07g0476900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin CDSP32, Trx CDSP32 description:Thioredoxin domain 2 containing protein. (Os07t0476900-01)
Sequence

CTTTAATTCATCCTCTCTTCTCCTCTTCTCCTTCATCACTAGGCAGTAGCCACAGTAGCC
AGTAGCTAGCTAGCTTGTCAAGCTAGGAGCTAGCAGCTGTGTGTCGTCGATGGCATCCAC
CGCCGCCTTCCTGTCCACGCTCGCCGGCTCGACCAGCCTGGGCGGCGCCACGCCGGCCAG
CGGCGGCGGGAGCGGGAGGAGCAAGACGGCGAGGTTCTTGAGGAGGCGGCGGCGCGGCGG
CGCGGTGAGGGCGGCGGTGTCCGGCACGGAGCAGGCGCCGGAGACGACGAAGAAGAAGGG
CGGCGGCGGCGGCGGCGGGGACGAGCGGGTGGTGCAGGTGCACAGCGCGGAGGAGCTCGA
CGGCGCGCTGCGGGCGGCGAAGGAGCGGCTGGTGGTGGTGGAGTTCGCGGCGAGCCACAG
CGTGAACAGCAGCCGCATCTACCCGTGCATGGTGGAGCTGAGCCGCACCTGCGGCGACGT
CGACTTCCTCCTCGTCATGGGCGACGAGTCGGACGCCACCCGGGAGCTGTGCCGCCGGGA
GGGGATCACCGCCGTGCCCCACTTCACCTTCTACAAGGGCGCCGAGAAGGTCCACGAGGA
GGAGGGGATCGGCCCCGACCAGCTCGCCGGCGACGTCCTCTACTACGGCGACCACCACTC
CGCCGTCGTCCAGCTCCACTCCCGCGCCGACGTCGAGTCCCTCATCTCCGACCACCGCGG
CGAGGGCGGCAAGCTGGTGGTGCTCGACGTGGGGCTCAAGCGATGCGGGCCCTGCGTGAA
GGTGTACCCCACCGTCGTGAAGCTGTCGCGCACCATGGCCGACACCACCGTCTTCGCCCG
CATGAACGGCGACGAGAACGACAGCTGCATGGAGTTCCTCCGCGACATGGACGTCGTCGA
GGTGCCCACCTTCCTCTTCATCAGGGACGGCGACATCGTCGGCCGCTACGTCGGCTCCGG
CAGGGGGGAGCTCATCGGCGAGATCCTCAGATACAACGGCGTCAAGGTCACCTAGACATA
TACAGATTCATCACTACGCAGCTCAGCTGCATGCAGCAACCGTAATTAAATTAATTACTG
TACTACTCTCTTGATCATGATTGTAATTTTACACCACCACACTAGCTTGAGAAGATCAAG
CTTGTTTTATACTGGGGACGATTTGATC