Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0475800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:17195348:17196977:-1 gene:Os07g0475800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic rRNA processing family protein. (Os07t0475800-01)
Sequence

ATGGCAAGGCTTGCAGCTGAAGACCCATTGGTTCGCGATGAAGCCATATTGGATGATGAT
GATGATGATGTTGATACCGACGAGGAAGAGTCCGAGTCGGAAGATGATTCAGGGGAGGAA
TTCCATGCCGAGCCTTCCAAGAAAGCTGTCTACAACAAGGAGGGGATCCTGGAGAAGCTC
GAGGACATTGCGTGGCCGGAGAATGTGGACTGGAGGCACAAGCTCACTATCGAACATGAC
CAGGGGGAGAAAGTCGATGTGAACGACGATCTTGCTCGTGAGCTTGCGTTCTACACGCAG
GCTTTGGATGGTACGAGGCAGGCCTTTGAGAAGTTGCAGTCTATGAAGGTCCGGTTTCTC
AGGCCGGCTGATTACTATGCTGAGATGGTTAAGACCGACGCTCACATGCACAAGATCAAG
GGGAGGCTCTTGTCTGAGAAGAAGAAGATTGAGGAGGCTGAGGAGAGGAAGAAGGCGAGA
GAGGCCAAGAAGAGGGCGAAGGAGGTGCAGGCACAGAAAGAAAAGGAGAGGGCCAAGCAG
AAGAAAGAACAGATTGAGTCCGTCAAGAAGTGGAGGAAGCAGAGGCAGCAAGGGGGCTTT
GCCAAGGGAAATGATGATGGGCCAGATCTGAATTTTGAAGGTGACGAAGGGTTCAAGCAA
TCAAAGAAAAAGAGGCCTGGTGTTTCTCCTGGTGATAGGTCTGGTGGTCTTGCTAAGAAG
GGTAAACAAGGAAAGAACAGGAAATCAAGGGATTCCAAGTTTGGGCATGGTGGTCGGAAA
GGGCTGAAGAAGCAAAACACTGCGGAGACGACAAATGACTTCAGAGGATTCAACCAGATG
GACAAGTCACAAAACAAGAGGAGAAAAATGGGTTGA

Peptide Sequence

PEP ID

Os07t0475800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:17195348:17196977:-1 gene:Os07g0475800 transcript:Os07t0475800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic rRNA processing family protein. (Os07t0475800-01)
Sequence

MARLAAEDPLVRDEAILDDDDDDVDTDEEESESEDDSGEEFHAEPSKKAVYNKEGILEKL
EDIAWPENVDWRHKLTIEHDQGEKVDVNDDLARELAFYTQALDGTRQAFEKLQSMKVRFL
RPADYYAEMVKTDAHMHKIKGRLLSEKKKIEEAEERKKAREAKKRAKEVQAQKEKERAKQ
KKEQIESVKKWRKQRQQGGFAKGNDDGPDLNFEGDEGFKQSKKKRPGVSPGDRSGGLAKK
GKQGKNRKSRDSKFGHGGRKGLKKQNTAETTNDFRGFNQMDKSQNKRRKMG

Transcript Sequence

Transcript ID

Os07t0475800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:17195348:17196977:-1 gene:Os07g0475800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic rRNA processing family protein. (Os07t0475800-01)
Sequence

GCCTCCGCGTGGTTTCCATCCCCGCGCGCGCCGCCCCTCTCCGCTGCCGGCCTCCGCTCC
TCCTCCGGCGCCGTCGCCGTCCCATCGGCCTCCGCTTGCCGCCCGCTCCGCGCTATTCAC
CCCGGCCGGCAGTGACAATGGCAAGGCTTGCAGCTGAAGACCCATTGGTTCGCGATGAAG
CCATATTGGATGATGATGATGATGATGTTGATACCGACGAGGAAGAGTCCGAGTCGGAAG
ATGATTCAGGGGAGGAATTCCATGCCGAGCCTTCCAAGAAAGCTGTCTACAACAAGGAGG
GGATCCTGGAGAAGCTCGAGGACATTGCGTGGCCGGAGAATGTGGACTGGAGGCACAAGC
TCACTATCGAACATGACCAGGGGGAGAAAGTCGATGTGAACGACGATCTTGCTCGTGAGC
TTGCGTTCTACACGCAGGCTTTGGATGGTACGAGGCAGGCCTTTGAGAAGTTGCAGTCTA
TGAAGGTCCGGTTTCTCAGGCCGGCTGATTACTATGCTGAGATGGTTAAGACCGACGCTC
ACATGCACAAGATCAAGGGGAGGCTCTTGTCTGAGAAGAAGAAGATTGAGGAGGCTGAGG
AGAGGAAGAAGGCGAGAGAGGCCAAGAAGAGGGCGAAGGAGGTGCAGGCACAGAAAGAAA
AGGAGAGGGCCAAGCAGAAGAAAGAACAGATTGAGTCCGTCAAGAAGTGGAGGAAGCAGA
GGCAGCAAGGGGGCTTTGCCAAGGGAAATGATGATGGGCCAGATCTGAATTTTGAAGGTG
ACGAAGGGTTCAAGCAATCAAAGAAAAAGAGGCCTGGTGTTTCTCCTGGTGATAGGTCTG
GTGGTCTTGCTAAGAAGGGTAAACAAGGAAAGAACAGGAAATCAAGGGATTCCAAGTTTG
GGCATGGTGGTCGGAAAGGGCTGAAGAAGCAAAACACTGCGGAGACGACAAATGACTTCA
GAGGATTCAACCAGATGGACAAGTCACAAAACAAGAGGAGAAAAATGGGTTGACGCGATA
TTGTAAGAATCTGCGTCTGCTTCCTTGAGCTGTATTACTAGTTGTTTTTGGTAACTTTAT
TTTACTGCAGTACATCGTTGCTAGATGCGAACGTTAGTTGAGATAGATTGTAGGAGGCAG
TTAAAACAAAAGACCATTTTATGTTTTAACTATGCTGTTCTCCACAAGATATTTGCATGT
ATCTGGTGATGGCCCTTTTTCGTTGTGTGATGTGGAAGAATCAATCTTACCCTGGAATTA
TCC