Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0472100-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:16944094:16946832:-1 gene:Os07g0472100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0472100-00)
Sequence	ATGTTGACTCCTACCACCGCCGCCGCCGCCGCCGTCGCCGTCTCCGGCGAGCTATCGATC TCTGCAACACAGTCCAGACTCCTCCCCTCAGCCTCCCGCGTCCACCTGCCCCACCTTCTC CCCGCTCCGCCTGCGCTGTCCTCCTCCAGGAGCCACCCCTCTGTCCCCACCCCGACCGGC GGCGGCGGCGCAGGAGAGGCTGCTGACCTTGATCCGTCCGATGAGCACCTCGCCACCATG TCCCCGCGCGAGCAGACGGCGCTGCTGTCGCGGCAGCGGCACTGGCGCCGCGCCCGCGAC CTGCTCGACCGCATGCGCGCGCTCCCGGGGTACGCGCCCAGCGCCATCCACTACGGCGTC GTCCTCCGCCACCTCGCCGGCGCGCGCCGGTGGGGCGAGCTCCGCCGCGTGTGGGCGCGG ATGGCGCGCGAGGGCGCGCCCCCGCCCACCAACCAGGCCTACGCCGCCCTCGCCGACGCG CTCGCCAAGGCCGGCCATGCGCGGGACTCCCTCCTGCTGCTCCGCCACATGCGCGCCCGA GGTGTGGCTCCCGACGAGGTTTCCATGAGCACCTTCGTCCGCATCCTCAAGGACGTCGGC CGCTACTCCGACGCGGCCACTCTTTTCGATAACTGGTGCAACGGCAGGTTCGAGGTTGGG TTCATTGATCTTGACTACAGCGCGCTCGATTCAGGTGGACCGATGCAGTTCTTGCTTGAG GAGATGTGCCATGGCAATGTCGACGATGCTGGTGCATCTGGCATTCAGGGAGTTGCTAGA ATTCCGAAGCTTGCTGTCACATATAACACGATGATTGATCTTTACGGGAAGGCCGGGAAG CTCAAGGATGCGATGGACATGTTTATGGGTATGCCAGATTATGGGGTTGCGGCGGATACA TGTACCTTCAATACATTGATCAACATATTCGGGTCGTGTGGTAATGTGAAGGAGGCAGAG GCACTGTTTGCTAGCATGATAGTTAGGGGAACTAATCCAGATGTTAAGACGTTTAATGTG ATGATGACATTGTTTGCATCCAAGGGTGATGTTGAGGGAGTTTTGAAGCACTACTATCAT ATTGGGAAAATGGGTTTATCTGCGGATACTGTGAGCTATGGGATTGTTCTCCGGGTGTTA TGTGAGAGAAAGATGGTACATGAAGCAGAAGATGTGATTGTGGGGATTATGAGGTCTGGG ACTTGTGTTCCTGAACAGTCTCTGCCTGTTGTCATGAAGATGTATATTGATCAGGGGTTG CTTGATAAAGCAAATGCATTCTTCGATAGACATTGCAGAGGTGATGAGGTCTCTTCCAAG ACATTTGCTGCCATCATGGATGCTTTTGCAGAGAGGGGTTTATGGGAGGAAGCCGAACAT GTTTTCTACTCTCATAGAGGAGTTAGGAGAAGAGGCATAGTTGAATACAATGTGATGGTC AAGGCTTATGGTGCAGCAAAACGGTATGATAGAGTCTCTCCTCTACTTGAGCACATGAAT GAGTCTGGTATTTCACCAGATGAGTGCACCTTTAACTCTTTAGTTCAGATGTTTGCTACG GGTGGATATCCACAGAGGGCTAAGAAGCTGTTAGGTAAAATGAAATATGCAGGGTTTAAA CCAAAGTGCGAGACATATGCTGCTGCTATTACAACTCTCTCCCGCAACTATTTGGTATCT GAAGCCATATATCTGTACAATGAAATGAAGGCCTCAGGTGTTGAGCCAAATGTGGTTGTT TATGGTGTGCTGATTGATACATTTGCTGAGACAGGGCAACTAGAGGAGGCATTGCATTAT AACAACTTGATGGAAGAATCTGGAATTGCTCCTAACCAAATTGTTTTAACTTCTCTTATC AAGGCCTACAGTAAAGCCAATTGCTGGAAGGAAGCGCAAGATTTGTATTCAAGGATGAAG AGCATGGATGGTGGCCCTGATATTGTTGCCTCTAATTCCATGCTAAACCTTTATGCAAAT CTTGGGATGGTCACTAAGGTTAAGGAAATATTTGACTGTTTGAGGAGAAATAATCAGGCC GATGATGTTTCATATACTAGCATGATATCCCTGTACAAGAACATGGGCTTGCTTAATGAG TCAGTTAGGGTTGCTCATGACTTGCAGAATTCAGGCTTACTATCCGACTGTGCTTCATAC AATGCTGTTATGGCATGTTTTGTGGCCAAGGGCAAGCTAAGAGAATGTGCAGAATTGGTG CAACAAATGCAGGAAGGCAACATTTTGCCAGATGCCTCAACGTTTGGAATGATATTTTCT ATAATGAAGAAAATCCAGATTGCACCTGAGGAAGTTTCACAGTTACAATCAGCATATAAT GACAACAGGAGCTCTTCTAGTCAAGCTGTAATCGCTTTCTTGTTTTTGATAGCTGGCATG CATGCTGCAGCATTAAATATTTGCGAGAAATATATGAAGCCTGTGTTGACAATAGATCAG TGTGCATGCAATGTTGCCTTCAAAGTTTATGCGTCCTGTGGGGAGGTGGATAAAGCTTTC AGTTTATTCATGCAGATGCATGAGTTGGGGCTGAAACCGGACACAGCTACTTACATCCAT TTGACAACTTGCTATGGGGAATATGGAATGCCGGGAGGTCTTAGAAGTGCAAATGGCTTT CTCAGACACCAAAACAATGATATTACCCTACATAAAACTGTGGTTTCCTGCAGGGAAAAT GAAAGCAATATTCTTGCTTATCAGTCAGTTAAGAAATGA

Peptide Sequence

PEP ID	Os07t0472100-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:16944094:16946832:-1 gene:Os07g0472100 transcript:Os07t0472100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0472100-00)
Sequence	MLTPTTAAAAAVAVSGELSISATQSRLLPSASRVHLPHLLPAPPALSSSRSHPSVPTPTG GGGAGEAADLDPSDEHLATMSPREQTALLSRQRHWRRARDLLDRMRALPGYAPSAIHYGV VLRHLAGARRWGELRRVWARMAREGAPPPTNQAYAALADALAKAGHARDSLLLLRHMRAR GVAPDEVSMSTFVRILKDVGRYSDAATLFDNWCNGRFEVGFIDLDYSALDSGGPMQFLLE EMCHGNVDDAGASGIQGVARIPKLAVTYNTMIDLYGKAGKLKDAMDMFMGMPDYGVAADT CTFNTLINIFGSCGNVKEAEALFASMIVRGTNPDVKTFNVMMTLFASKGDVEGVLKHYYH IGKMGLSADTVSYGIVLRVLCERKMVHEAEDVIVGIMRSGTCVPEQSLPVVMKMYIDQGL LDKANAFFDRHCRGDEVSSKTFAAIMDAFAERGLWEEAEHVFYSHRGVRRRGIVEYNVMV KAYGAAKRYDRVSPLLEHMNESGISPDECTFNSLVQMFATGGYPQRAKKLLGKMKYAGFK PKCETYAAAITTLSRNYLVSEAIYLYNEMKASGVEPNVVVYGVLIDTFAETGQLEEALHY NNLMEESGIAPNQIVLTSLIKAYSKANCWKEAQDLYSRMKSMDGGPDIVASNSMLNLYAN LGMVTKVKEIFDCLRRNNQADDVSYTSMISLYKNMGLLNESVRVAHDLQNSGLLSDCASY NAVMACFVAKGKLRECAELVQQMQEGNILPDASTFGMIFSIMKKIQIAPEEVSQLQSAYN DNRSSSSQAVIAFLFLIAGMHAAALNICEKYMKPVLTIDQCACNVAFKVYASCGEVDKAF SLFMQMHELGLKPDTATYIHLTTCYGEYGMPGGLRSANGFLRHQNNDITLHKTVVSCREN ESNILAYQSVKK

Transcript Sequence

Transcript ID	Os07t0472100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:16944094:16946832:-1 gene:Os07g0472100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0472100-00)
Sequence	ATGTTGACTCCTACCACCGCCGCCGCCGCCGCCGTCGCCGTCTCCGGCGAGCTATCGATC TCTGCAACACAGTCCAGACTCCTCCCCTCAGCCTCCCGCGTCCACCTGCCCCACCTTCTC CCCGCTCCGCCTGCGCTGTCCTCCTCCAGGAGCCACCCCTCTGTCCCCACCCCGACCGGC GGCGGCGGCGCAGGAGAGGCTGCTGACCTTGATCCGTCCGATGAGCACCTCGCCACCATG TCCCCGCGCGAGCAGACGGCGCTGCTGTCGCGGCAGCGGCACTGGCGCCGCGCCCGCGAC CTGCTCGACCGCATGCGCGCGCTCCCGGGGTACGCGCCCAGCGCCATCCACTACGGCGTC GTCCTCCGCCACCTCGCCGGCGCGCGCCGGTGGGGCGAGCTCCGCCGCGTGTGGGCGCGG ATGGCGCGCGAGGGCGCGCCCCCGCCCACCAACCAGGCCTACGCCGCCCTCGCCGACGCG CTCGCCAAGGCCGGCCATGCGCGGGACTCCCTCCTGCTGCTCCGCCACATGCGCGCCCGA GGTGTGGCTCCCGACGAGGTTTCCATGAGCACCTTCGTCCGCATCCTCAAGGACGTCGGC CGCTACTCCGACGCGGCCACTCTTTTCGATAACTGGTGCAACGGCAGGTTCGAGGTTGGG TTCATTGATCTTGACTACAGCGCGCTCGATTCAGGTGGACCGATGCAGTTCTTGCTTGAG GAGATGTGCCATGGCAATGTCGACGATGCTGGTGCATCTGGCATTCAGGGAGTTGCTAGA ATTCCGAAGCTTGCTGTCACATATAACACGATGATTGATCTTTACGGGAAGGCCGGGAAG CTCAAGGATGCGATGGACATGTTTATGGGTATGCCAGATTATGGGGTTGCGGCGGATACA TGTACCTTCAATACATTGATCAACATATTCGGGTCGTGTGGTAATGTGAAGGAGGCAGAG GCACTGTTTGCTAGCATGATAGTTAGGGGAACTAATCCAGATGTTAAGACGTTTAATGTG ATGATGACATTGTTTGCATCCAAGGGTGATGTTGAGGGAGTTTTGAAGCACTACTATCAT ATTGGGAAAATGGGTTTATCTGCGGATACTGTGAGCTATGGGATTGTTCTCCGGGTGTTA TGTGAGAGAAAGATGGTACATGAAGCAGAAGATGTGATTGTGGGGATTATGAGGTCTGGG ACTTGTGTTCCTGAACAGTCTCTGCCTGTTGTCATGAAGATGTATATTGATCAGGGGTTG CTTGATAAAGCAAATGCATTCTTCGATAGACATTGCAGAGGTGATGAGGTCTCTTCCAAG ACATTTGCTGCCATCATGGATGCTTTTGCAGAGAGGGGTTTATGGGAGGAAGCCGAACAT GTTTTCTACTCTCATAGAGGAGTTAGGAGAAGAGGCATAGTTGAATACAATGTGATGGTC AAGGCTTATGGTGCAGCAAAACGGTATGATAGAGTCTCTCCTCTACTTGAGCACATGAAT GAGTCTGGTATTTCACCAGATGAGTGCACCTTTAACTCTTTAGTTCAGATGTTTGCTACG GGTGGATATCCACAGAGGGCTAAGAAGCTGTTAGGTAAAATGAAATATGCAGGGTTTAAA CCAAAGTGCGAGACATATGCTGCTGCTATTACAACTCTCTCCCGCAACTATTTGGTATCT GAAGCCATATATCTGTACAATGAAATGAAGGCCTCAGGTGTTGAGCCAAATGTGGTTGTT TATGGTGTGCTGATTGATACATTTGCTGAGACAGGGCAACTAGAGGAGGCATTGCATTAT AACAACTTGATGGAAGAATCTGGAATTGCTCCTAACCAAATTGTTTTAACTTCTCTTATC AAGGCCTACAGTAAAGCCAATTGCTGGAAGGAAGCGCAAGATTTGTATTCAAGGATGAAG AGCATGGATGGTGGCCCTGATATTGTTGCCTCTAATTCCATGCTAAACCTTTATGCAAAT CTTGGGATGGTCACTAAGGTTAAGGAAATATTTGACTGTTTGAGGAGAAATAATCAGGCC GATGATGTTTCATATACTAGCATGATATCCCTGTACAAGAACATGGGCTTGCTTAATGAG TCAGTTAGGGTTGCTCATGACTTGCAGAATTCAGGCTTACTATCCGACTGTGCTTCATAC AATGCTGTTATGGCATGTTTTGTGGCCAAGGGCAAGCTAAGAGAATGTGCAGAATTGGTG CAACAAATGCAGGAAGGCAACATTTTGCCAGATGCCTCAACGTTTGGAATGATATTTTCT ATAATGAAGAAAATCCAGATTGCACCTGAGGAAGTTTCACAGTTACAATCAGCATATAAT GACAACAGGAGCTCTTCTAGTCAAGCTGTAATCGCTTTCTTGTTTTTGATAGCTGGCATG CATGCTGCAGCATTAAATATTTGCGAGAAATATATGAAGCCTGTGTTGACAATAGATCAG TGTGCATGCAATGTTGCCTTCAAAGTTTATGCGTCCTGTGGGGAGGTGGATAAAGCTTTC AGTTTATTCATGCAGATGCATGAGTTGGGGCTGAAACCGGACACAGCTACTTACATCCAT TTGACAACTTGCTATGGGGAATATGGAATGCCGGGAGGTCTTAGAAGTGCAAATGGCTTT CTCAGACACCAAAACAATGATATTACCCTACATAAAACTGTGGTTTCCTGCAGGGAAAAT GAAAGCAATATTCTTGCTTATCAGTCAGTTAAGAAATGA