Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0467900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:16660287:16669984:1 gene:Os07g0467900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA primase. (Os07t0467900-01)
Sequence	ATGGCGGCGCACGACCCCAAGGACGACGTCGACCGCCTCTTCGCCTGCTTCAAGTGCGGC GTCTCCCCTCCCCAGTCGGCGTTCAGGGAGAGGCCGCGGCGGGCGGGCAAGAGGTCGCGG GTAGCGTCCACGGCGGATGGAGGCGGCGGCGGCGGCGGCGGGAGCTCCTCCTCTTCTACT CCTACGCCGGACGCGGCGGAGAAGCATGAGGCGCCGTCGTCGGCGGTGATCAAATTTACT GGCCGCAAGCAGATGTCCCCGGTTGTGTTCTACGGTTCCCCGCAAGGTGTCCCGGTGAAG AAGCCGCTCAGCCTGTTGCGGTTGTTGCGGGAGATCCGAATTGATCTCAAGAAGCAAACT GATTTGGTCCCCAGTGCCGGTGTTTGGGCAACCTTCCCTAGGCAAGAGGAGGCAATCAGG TTCTGTAAAGCACATGCTTATACCAATGTCTTTAGCTACCAAGATCATTTAAGTGGGCAG AGAAGATTCCTCGTGTCTACATACGATGAGTTCTGGAAAAGGTACAATAATATGGATCCG CAGATTCGCCATCACTATGAAGTTATACAGGATGGTTCACCTTGCCATATTTACTTTGAT CTTGAGTTTGACCCAAGATTGAACAAGATGAGAGATGCAGATGAAATGGTGGATATATTG GTTGCAGCCACATTCAGTGCTTTGCATGATAAATATTCCATTGAAGGACAGGAGGAATGG ATAATAGAGTTAGACTCGTCTACTGAAGAAAAGTTCTCACGCCATTTGATCATCCGCATA CCGAAGACTGCATTCAAGGACAACTCCCATGTTGGTGCATTTATCTCTGAGATCTGCTCA CGGATCGCATCTCAGCGTGCAGCTAATCCTAACTTTGATAAACTGTACATTACGAAAGAT AGCAGTTGTACAGGTCATGCTGATCATCTCTTTATGGATATTGCTGTTTACTCCCGGAAT CGTTGTTTTCGTTTAGCCTTCTCATCGAAGTCTGGGAAGAAGTCATTTCTTGTGGCTACT GAGCGTTTCAAACATAAAAACATGAGTGATAAGGAGCTCTTTATGGAGTCACTTATTTGC AGATTAGATGATGACTGTCATAAACTTTTGACATGCAAACTTGATTTAGATTGCAAGAAA ACATTGCATTTTGACTCGGAAGCCAGCATGATACGAATTCAAGGAAGAAACAGCAAGGAC TCCATTGGTACCTATCGAAATGATTTTCCTGTTTCAAATACTTATGGGATATCTCCTTTT CCAGCTCTGGATGTCTTTATTGAATCTATAGCTTCTTTTGGAAATGTCTCAGGAAAAATT AGATGCTGGTACTGGTTTTCACATTATGGTTTGATGATTTATAGTATGTCAAGGAGTAGA TACTGTGAGCATATTGGAAGAGAACATAAAAGCAATCATGTAATGTATATTGTTGAATTC CAGAGAGCTGCATATTACCAAAAGTGTTATGACCCTGACTGCCAAGGTTACCGTTCTCCA TTGCGCCCTGTTCCCTGGGACGTGATTCCTGAGCTCAGCTCGATATCCGATTCAGCCCAG AGGGAATATCAGGGGGAAGTTGTAGAGATCAACATTGAGGGGAGGAACAGGAATGATGAG TACCTTTGCAATGGGACGAAATCAGTTACAGAGAGCGGTGAGGATGATCCGAGCTGGTGG GAAGAAGCGGTGAAATTTGCTGACAGCATCGAGAACACCGATCATGGTCCTGACACACGT GACCAAGACAAGGATTGTGATGACGCAGACTGGTGGATGGATGCTGAAAGGATTATGGTG CAGATTGAGGAACAGATAGGGTCACAGAGCAACGCATAG

Peptide Sequence

PEP ID	Os07t0467900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:16660287:16669984:1 gene:Os07g0467900 transcript:Os07t0467900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA primase. (Os07t0467900-01)
Sequence	MAAHDPKDDVDRLFACFKCGVSPPQSAFRERPRRAGKRSRVASTADGGGGGGGGSSSSST PTPDAAEKHEAPSSAVIKFTGRKQMSPVVFYGSPQGVPVKKPLSLLRLLREIRIDLKKQT DLVPSAGVWATFPRQEEAIRFCKAHAYTNVFSYQDHLSGQRRFLVSTYDEFWKRYNNMDP QIRHHYEVIQDGSPCHIYFDLEFDPRLNKMRDADEMVDILVAATFSALHDKYSIEGQEEW IIELDSSTEEKFSRHLIIRIPKTAFKDNSHVGAFISEICSRIASQRAANPNFDKLYITKD SSCTGHADHLFMDIAVYSRNRCFRLAFSSKSGKKSFLVATERFKHKNMSDKELFMESLIC RLDDDCHKLLTCKLDLDCKKTLHFDSEASMIRIQGRNSKDSIGTYRNDFPVSNTYGISPF PALDVFIESIASFGNVSGKIRCWYWFSHYGLMIYSMSRSRYCEHIGREHKSNHVMYIVEF QRAAYYQKCYDPDCQGYRSPLRPVPWDVIPELSSISDSAQREYQGEVVEINIEGRNRNDE YLCNGTKSVTESGEDDPSWWEEAVKFADSIENTDHGPDTRDQDKDCDDADWWMDAERIMV QIEEQIGSQSNA

Transcript Sequence

Transcript ID	Os07t0467900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:16660287:16669984:1 gene:Os07g0467900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA primase. (Os07t0467900-01)
Sequence	GCATCGAATCCAATCCATGGCGGCGCACGACCCCAAGGACGACGTCGACCGCCTCTTCGC CTGCTTCAAGTGCGGCGTCTCCCCTCCCCAGTCGGCGTTCAGGGAGAGGCCGCGGCGGGC GGGCAAGAGGTCGCGGGTAGCGTCCACGGCGGATGGAGGCGGCGGCGGCGGCGGCGGGAG CTCCTCCTCTTCTACTCCTACGCCGGACGCGGCGGAGAAGCATGAGGCGCCGTCGTCGGC GGTGATCAAATTTACTGGCCGCAAGCAGATGTCCCCGGTTGTGTTCTACGGTTCCCCGCA AGGTGTCCCGGTGAAGAAGCCGCTCAGCCTGTTGCGGTTGTTGCGGGAGATCCGAATTGA TCTCAAGAAGCAAACTGATTTGGTCCCCAGTGCCGGTGTTTGGGCAACCTTCCCTAGGCA AGAGGAGGCAATCAGGTTCTGTAAAGCACATGCTTATACCAATGTCTTTAGCTACCAAGA TCATTTAAGTGGGCAGAGAAGATTCCTCGTGTCTACATACGATGAGTTCTGGAAAAGGTA CAATAATATGGATCCGCAGATTCGCCATCACTATGAAGTTATACAGGATGGTTCACCTTG CCATATTTACTTTGATCTTGAGTTTGACCCAAGATTGAACAAGATGAGAGATGCAGATGA AATGGTGGATATATTGGTTGCAGCCACATTCAGTGCTTTGCATGATAAATATTCCATTGA AGGACAGGAGGAATGGATAATAGAGTTAGACTCGTCTACTGAAGAAAAGTTCTCACGCCA TTTGATCATCCGCATACCGAAGACTGCATTCAAGGACAACTCCCATGTTGGTGCATTTAT CTCTGAGATCTGCTCACGGATCGCATCTCAGCGTGCAGCTAATCCTAACTTTGATAAACT GTACATTACGAAAGATAGCAGTTGTACAGGTCATGCTGATCATCTCTTTATGGATATTGC TGTTTACTCCCGGAATCGTTGTTTTCGTTTAGCCTTCTCATCGAAGTCTGGGAAGAAGTC ATTTCTTGTGGCTACTGAGCGTTTCAAACATAAAAACATGAGTGATAAGGAGCTCTTTAT GGAGTCACTTATTTGCAGATTAGATGATGACTGTCATAAACTTTTGACATGCAAACTTGA TTTAGATTGCAAGAAAACATTGCATTTTGACTCGGAAGCCAGCATGATACGAATTCAAGG AAGAAACAGCAAGGACTCCATTGGTACCTATCGAAATGATTTTCCTGTTTCAAATACTTA TGGGATATCTCCTTTTCCAGCTCTGGATGTCTTTATTGAATCTATAGCTTCTTTTGGAAA TGTCTCAGGAAAAATTAGATGCTGGTACTGGTTTTCACATTATGGTTTGATGATTTATAG TATGTCAAGGAGTAGATACTGTGAGCATATTGGAAGAGAACATAAAAGCAATCATGTAAT GTATATTGTTGAATTCCAGAGAGCTGCATATTACCAAAAGTGTTATGACCCTGACTGCCA AGGTTACCGTTCTCCATTGCGCCCTGTTCCCTGGGACGTGATTCCTGAGCTCAGCTCGAT ATCCGATTCAGCCCAGAGGGAATATCAGGGGGAAGTTGTAGAGATCAACATTGAGGGGAG GAACAGGAATGATGAGTACCTTTGCAATGGGACGAAATCAGTTACAGAGAGCGGTGAGGA TGATCCGAGCTGGTGGGAAGAAGCGGTGAAATTTGCTGACAGCATCGAGAACACCGATCA TGGTCCTGACACACGTGACCAAGACAAGGATTGTGATGACGCAGACTGGTGGATGGATGC TGAAAGGATTATGGTGCAGATTGAGGAACAGATAGGGTCACAGAGCAACGCATAGCCGTC CCTTCAGTGACTGGCTAATCAAAACTCAACTCACTAACAGAAGAGCAAAAGGAAATGGAA AACACATCAGGCCAGCGATGACTTCAACGCTCACTTTGTGGATGCATCCGGCCTGCCGCT TCAAGCAACCAGGATATTACGCACTCCAGCTTCAGGGCCTTCTTTTGCTTCATTAGAATC CTCCACTGTTATAACAAGGAAACAAGTCCATAAATCACAGTTAGAGGGGTCGAAACATTC TTATCTCTAATCAATTTAGTTATCTTAGCTCTTTCAGGGAATCTTCTCTAGAGCCCTACC TGGAGTACTAGGATCTTTCCTTATTCCTCCCAGAGACTGATCATGTCATTCCAGAGGGAC AGGGGAAAGCCAAAGCATAGTTAGGCTATTGGAGCTTGGCTGGCGCGAAACATATTGCGA GATTATTACCATGAGGAATAGAAAGGTGGTCTGGCGTGCAAGCTTGTTTGTAGTTAGAAT TGTACAGTTTTTTTTTTCCTTTTCTATGTAATTTAACTCCTATCAATGTAACGTCATCCA ATCTGTTTGGTCGTTCGGGAAAAAAAAAGCCAAAGATTCTTAGCATGATATTGGGGAATC TCCTTGCTATTACTCAAACAAGCATGAAACGTATGCTTGCATATTCGTCCATAGGGCAAA TCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGATGGATATGCAAGCATGA TAACTTATATGCTTTTC