Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0466200-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:16512509:16521870:1 gene:Os07g0466200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0466200-01);Conserved hypothetical protein. (Os07t0466200-02)
Sequence	ATGCTTTTGTTCGTGCAACACCCAACACCCAACAGGGAGGGGAGGGGGGCGATCGACATG GTGCGAGCACCGGCAGGGGCAGATCCACCACCATTCCTCCAAACACGCATGGACATGGCC GCCTCCTCCTCCTCCTCTTCCCTCTCTCAATCTCACTCTCAGTCTCAGACGCAGGCGCAC AAGGTGGAGGAGGAGGAGCACGCCGCCGACCCACCCTCCCCATCCCGTAACGCCTCCTCC AAGTACGACTTCGTCAAGGTCAAGGTGTGGCTTGGCGAGAATGCCGATCACTACTACGTC CTCTCCAGGTTCCTCCTCTGCAGGATGCTCACCGTCACCAAGATTCCTAATCATGTTGCC ATTAAGATTGCCCTCGAACTCAAGAAATTGCTTGTCGACAACAGCCTGCTTGATGTTTCT CAGAGTGACTTAGAAGCTAACCTATTCAAGCTGATGGAGAAGCGGGGATACGGCGAGGAT TATATTAATCGGTATAAAATGATGACCAGATTCCATCATCAAAGAGTACCACTAGTAGTT TTAGTGTGTGGAACTGCTTGTACGGGAAAATCAACAATTGCTACGCAACTAGCTGGAAGG TTGAATCTACCAAATGTTTTGCAGACAGACATGGTGTATGAGTTGCTACGGACATCAACA GATGCCCCTCTTACTTCGGTGCCCGTGTGGGCTCGGGATTTTGATTCTCCTGAAGAGCTT ATCACAGAGTTCTGCAGAGAATGCAGAGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAG AAGGCCATGAAAGATGGGAAGCCAATTATCATCGAGGGAATTCATTTGGATCCAAGCATT TATTTTATGGACGAGGAAAAGAGAGATGATAATTCAAAAATGGAGAAAAAGGTAGCTGAA TGTGAACAGTCACCAGCATCTGTAGAGAGCAAGACAGAAAGGCAACAAGAAAACGAACTA CATGAGAAGAGAATGGATGACAGTCAGGAGTGCATGTCTGAGGAGGGAGGAATAAGTGAA GGGCTATCTTGTGCTAAAAGCCACGTAATTAGCTCTTCTGATTCTGCATATTCTAAAGAG AAAAATCCCAGAGCTGAAGACGAAGGACATAAGGATTTGGACCTACAGAAAAACAACACC ACCAAGAAGGACAAACCTGCTGCTGAACCAATAGTAGTCCCAATTGTGTTGAGGATGTCT GATTTTGATCACAAGGCATTGCTAGAGGAATGGACAGCCACCAGGGCTTCCAGGGATAAT TGTCTTCCTCAGGATCATCGAAAGCTTATAAACAACCTTAAGCTTATTCAGGACTATCTT TGTTCTTTTGAGTCGCAGGGGTTGACCGTTGTTGACATTTCAGCGAACTCATTCCCTCAG ACACTAGATTGGCTTCACAGCTATCTTCTTCAGGTACCTGAGAAAAGGGCATATCCTAAT GTGCTTTCCTTATAG

Peptide Sequence

PEP ID	Os07t0466200-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:16512509:16521870:1 gene:Os07g0466200 transcript:Os07t0466200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0466200-01);Conserved hypothetical protein. (Os07t0466200-02)
Sequence	MLLFVQHPTPNREGRGAIDMVRAPAGADPPPFLQTRMDMAASSSSSSLSQSHSQSQTQAH KVEEEEHAADPPSPSRNASSKYDFVKVKVWLGENADHYYVLSRFLLCRMLTVTKIPNHVA IKIALELKKLLVDNSLLDVSQSDLEANLFKLMEKRGYGEDYINRYKMMTRFHHQRVPLVV LVCGTACTGKSTIATQLAGRLNLPNVLQTDMVYELLRTSTDAPLTSVPVWARDFDSPEEL ITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYFMDEEKRDDNSKMEKKVAE CEQSPASVESKTERQQENELHEKRMDDSQECMSEEGGISEGLSCAKSHVISSSDSAYSKE KNPRAEDEGHKDLDLQKNNTTKKDKPAAEPIVVPIVLRMSDFDHKALLEEWTATRASRDN CLPQDHRKLINNLKLIQDYLCSFESQGLTVVDISANSFPQTLDWLHSYLLQVPEKRAYPN VLSL

Transcript Sequence

Transcript ID	Os07t0466200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:16512509:16521870:1 gene:Os07g0466200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0466200-01);Conserved hypothetical protein. (Os07t0466200-02)
Sequence	AGGTTCCTTTTCCCCTCCTTTCTCTTCTCCCCTCCTCTCGTCTCTTCCCTCTCCTCTCCA TATGTTGAGTTGTTGACCTCCGGCGGCCCTTGTTGCAGATCAGGGCGGCTGCGATTCGCG GCGGCGGAGGCGCAAGGAAGCCACTCCCCATCCCCCAGCCCCACACGCAGCAGGTGGCAG CGTCCCGTCTTCCACTTCTTCTTCATTCATCTCCTGTGAATGTGAATGTGATCCTGTCCT GCTGCTTCTTCCATTTCCAGTTCCACCCCTTCTCTCTTGTGCATGCTTTTGTTCGTGCAA CACCCAACACCCAACAGGGAGGGGAGGGGGGCGATCGACATGGTGCGAGCACCGGCAGGG GCAGATCCACCACCATTCCTCCAAACACGCATGGACATGGCCGCCTCCTCCTCCTCCTCT TCCCTCTCTCAATCTCACTCTCAGTCTCAGACGCAGGCGCACAAGGTGGAGGAGGAGGAG CACGCCGCCGACCCACCCTCCCCATCCCGTAACGCCTCCTCCAAGTACGACTTCGTCAAG GTCAAGGTGTGGCTTGGCGAGAATGCCGATCACTACTACGTCCTCTCCAGGTTCCTCCTC TGCAGGATGCTCACCGTCACCAAGATTCCTAATCATGTTGCCATTAAGATTGCCCTCGAA CTCAAGAAATTGCTTGTCGACAACAGCCTGCTTGATGTTTCTCAGAGTGACTTAGAAGCT AACCTATTCAAGCTGATGGAGAAGCGGGGATACGGCGAGGATTATATTAATCGGTATAAA ATGATGACCAGATTCCATCATCAAAGAGTACCACTAGTAGTTTTAGTGTGTGGAACTGCT TGTACGGGAAAATCAACAATTGCTACGCAACTAGCTGGAAGGTTGAATCTACCAAATGTT TTGCAGACAGACATGGTGTATGAGTTGCTACGGACATCAACAGATGCCCCTCTTACTTCG GTGCCCGTGTGGGCTCGGGATTTTGATTCTCCTGAAGAGCTTATCACAGAGTTCTGCAGA GAATGCAGAGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAGAAGGCCATGAAAGATGGG AAGCCAATTATCATCGAGGGAATTCATTTGGATCCAAGCATTTATTTTATGGACGAGGAA AAGAGAGATGATAATTCAAAAATGGAGAAAAAGGTAGCTGAATGTGAACAGTCACCAGCA TCTGTAGAGAGCAAGACAGAAAGGCAACAAGAAAACGAACTACATGAGAAGAGAATGGAT GACAGTCAGGAGTGCATGTCTGAGGAGGGAGGAATAAGTGAAGGGCTATCTTGTGCTAAA AGCCACGTAATTAGCTCTTCTGATTCTGCATATTCTAAAGAGAAAAATCCCAGAGCTGAA GACGAAGGACATAAGGATTTGGACCTACAGAAAAACAACACCACCAAGAAGGACAAACCT GCTGCTGAACCAATAGTAGTCCCAATTGTGTTGAGGATGTCTGATTTTGATCACAAGGCA TTGCTAGAGGAATGGACAGCCACCAGGGCTTCCAGGGATAATTGTCTTCCTCAGGATCAT CGAAAGCTTATAAACAACCTTAAGCTTATTCAGGACTATCTTTGTTCTTTTGAGTCGCAG GGGTTGACCGTTGTTGACATTTCAGCGAACTCATTCCCTCAGACACTAGATTGGCTTCAC AGCTATCTTCTTCAGGTACCTGAGAAAAGGGCATATCCTAATGTGCTTTCCTTATAGCGA TTGAATCATCGCGAGCTATTTCCATTAAACTATGCATTGCCAATCTATATAACTTTTTTT TTACGAATTATTCAGTTGACATGCACCACAATATACCAAAACATTAACCAAATGATAAGT TCTAAACCATTATTTATCTGTAACAGGTCTTTTCTCAAACTGTCATATATGAGTATATGA TCTGATCAAATTTACTTGATGAAGCTTCATGTTTTTTTAAAGAAAAATCTTATAATCTTG ATTTGACAATATACTATCTAGTGGTGAGTTGGTCCTTGATTTTGTTATTATTTACTTGAC AGTGCATCGAACGTGGCCTTTTGGCTGCATGTTCAGAAAGTCCCAAGCAAGGTGGGAGCT AACGGATACAGATGAGCGAGAGGGAAGCCCGCATTAGTCTTGCTTAACATATACTCACTC TGTTCCAAAATAAACCAACATTGTACGGATGTGCCACATCCTAATACATCTTGGACACAA GTACTAGTATGTGTCACATCGGGTTTATTTTGGGACAGAGGGAGTATGTCACATATATGA TGCTTGTAAAATTGTGCTTTTAGTGGGTTGATAATCAGGAACTTGTGCGTTGCCGCCATC CATAAACGTTGGCAGTGGAAATGTAACCGAGTAGAGAACTCCATAGTTCGATAAAAACCT TTTAGAGCTGGAATAGGAAAAGGAAAATTAAAAAAAAAAGCTCAAAAAAGGTTGACAACC AAAGTTCAGAGCGATGTGCATGCGCTAAGGCCCAAACGAAAAATGCAAATATAGGAGGTG TTTAGATATAGGGGTGTGAAGTTTTGGCGTGTTACATCAGATTTATATAGGGTGTAGCAT GGGTATTCGGACACTAAAAAAAATAATTACAGAATCAGTTAGTAAACTGTGAGAAGAATT TATTAAGCTTAATTAATTCGTCATTAGTAAATGTTTATTGTAGTATCATATTGTGTCAAA TCATGGAGTAATTAGGCTTAAAAGATTCGTTTCGCAAATTAGTCGTAATATGTGCAATTA GTTACTCTCTTCATTCCAAATTGATCACTATAGTTTTTTTTGAGGTTATTTCTAAATAAT CTATATATTTCTGTTCCTTCTATGCACACAAGTATTTATAACCTACATGCAATATTTTAA TTTACTATTGGTTAGGAAATAGTGGGGATGGTGCATGCTACTATTGGCTAGGAAATAGTG GGGATGGTGCATGTATCGAGTTTGTTGCTAGAGTAAATATAGCATTAGAGTTATTAGATT TTCTTGGTTTTGGTGTATCTATAAAATATGTAGATCAATTTGGAATAGAGGGAGTATTTT TTAAGCCTATATTTAATATTTTATGTATGTGTTCAAACGTTTAATGTAGGGTGAAAAATT TTAAGGTGGGATCATTCACAGATGATGCTAACGATCCATCCACAAAAGTTCTGTTTCTCC CAGAGCTAGTACATCTCGCAGAATTGAGACGAGTATGCTTAATTAATTGAGAGAAAAGAC GAGTATAAAGAGGTCAATCTCGGGTCATCCAACATAGAAGTATCAACAAACTCGATCAGC ACATCAAGGTCGTCCAAAGTAAAAAAAAAAAAAAAAAAAAAAGAATCAGGTAGTCGAAAG CCAAACTTGCGCAAAAATAAATGTGGCGCAAAGTGGCCCCGATGAAAGCGGAGACGTTAA AGCCGACGAAATGGCCGGCACTCCTGCGGCGTCGGCTTCGCTAGCTAGCCGTTCCCCCAT GTCGCTCTCCGCGACATCCGGAGCTTAGACTTGCGGCAATGGCGGCGGCCACGCATGTCG CTGCCCTGCTTTGCGTTGCCTCGATCGCTGCCTTCCCTTCTCCGCCCCGCAGGTAACTGA CCAAAGAAGTGTGCAGATCTGGTATATGTGCTACAGTGTTAATTTGGGATTGACCTGTGG CATCGGCTGGTAAACACAATATCATTTCCCTACCTTGATTTGGTGAGTCTGTCTACTCCT GATTAGATCTTATCACTGTGCTTCCTGTTATTTGGGGTATGAATATGATTAGGCCTTGAT TTGACAGCGACAGATACACAAGTTGCCGCCCAAATCATCAATGCAATGTAGTGTGCTTCA CTTGGAAAAGCTTCCATTGTACCATATGCTGTGTGTTCTTCTACGACAAATCAGAGGAGC TATAGAGCAAATAATCCTTCTGACCATCTCAAACACAGGGGTCAATCAATCATCTAATTA GGCCTCTTTGTTGCAGGGGATACCCAATTATTGGTTCCTCTGAAAATGTCCACAGGGTAA CAGAACTTAAGCTTTAAGACCGTCGCGAGCACTTGGTTAATGTTCCAGTGTTAGTTCCAA CCTGAAAAGGCTCATCAACTAGCCAAAATGTGCCACAACAGCCAACTATTTTGGCACCAC AAAAACTACGGCATTGCTACATTTTTGGCACAAAAGATTGGTGAAGCGAGGGAACCATCC AAACAGATGGGAAACTGTCAGCAGAAAGAAGAATTGGGCAAAGAGGTTCTCTACATGATA GCGTTTGAGATTAAAATAAAAAGGAAAAATTGTATATAGTTTAGTCCACGCAAAAAGATG TGAAAATGATCTGAATGATAGTCAACAAAACTTAAGCTACTTATCATATTGCCGAATCGA CAAGGCCTTGAATGAACTCATGTTTTGCTCACTC