Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0462500-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:16259328:16262134:1 gene:Os07g0462500 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0462500-00)
Sequence

ATGGCAAAGGAGTGCGGCAGCAGCAGTGTGATCGTCGGGGTGGTGAAGGTGAAGGTGGTG
CGAGGGACCAATCTTGCCGTCCGTGATGTCTTCAGCAGCGATCCCTACGTCGTCCTCAAG
CTCGGCAACCAGGAGGTGAGAACTCGTACAGTGAGGAAAAACACCAATCCAGTGTGGAAC
GAGGACCTGACGCTCATCGTTCAAGATCTCAACCATCTCCTCGTCACTCTCGAGGTCTAC
GACCGTGACCCGTTCGTCGACGACCCCATGGGCGCGGCGTTCTTCGAGCTCCGGCCGCTG
GTGGAGGCGGCCGCGGCGAGCAGCCGCCGCCGTACCCCCTCCGGCGTTGACAGTAAAGAG
GACGGCACCGCCGTGGTCCCAAGGAGCGGGAGCTCCGTTGTGTGGTCGGCGTCGGAGGGG
AAGGCGGCGCAGGGCCTGGTGCTGAGGCTCGCCGGCGTCGAGTCCGGCGAGGTGGAGCTG
CAGCTGGAACTGGAATGGCACGGCGGCGCGGCTGGCGACACCTCAATGATCGATCGATTG
ATTGATCGTAACTCGTAA

Peptide Sequence

PEP ID

Os07t0462500-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:16259328:16262134:1 gene:Os07g0462500 transcript:Os07t0462500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0462500-00)
Sequence

MAKECGSSSVIVGVVKVKVVRGTNLAVRDVFSSDPYVVLKLGNQEVRTRTVRKNTNPVWN
EDLTLIVQDLNHLLVTLEVYDRDPFVDDPMGAAFFELRPLVEAAAASSRRRTPSGVDSKE
DGTAVVPRSGSSVVWSASEGKAAQGLVLRLAGVESGEVELQLELEWHGGAAGDTSMIDRL
IDRNS

Transcript Sequence

Transcript ID

Os07t0462500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:16259328:16262134:1 gene:Os07g0462500 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0462500-00)
Sequence

ATGGCAAAGGAGTGCGGCAGCAGCAGTGTGATCGTCGGGGTGGTGAAGGTGAAGGTGGTG
CGAGGGACCAATCTTGCCGTCCGTGATGTCTTCAGCAGCGATCCCTACGTCGTCCTCAAG
CTCGGCAACCAGGAGGTGAGAACTCGTACAGTGAGGAAAAACACCAATCCAGTGTGGAAC
GAGGACCTGACGCTCATCGTTCAAGATCTCAACCATCTCCTCGTCACTCTCGAGGTCTAC
GACCGTGACCCGTTCGTCGACGACCCCATGGGCGCGGCGTTCTTCGAGCTCCGGCCGCTG
GTGGAGGCGGCCGCGGCGAGCAGCCGCCGCCGTACCCCCTCCGGCGTTGACAGTAAAGAG
GACGGCACCGCCGTGGTCCCAAGGAGCGGGAGCTCCGTTGTGTGGTCGGCGTCGGAGGGG
AAGGCGGCGCAGGGCCTGGTGCTGAGGCTCGCCGGCGTCGAGTCCGGCGAGGTGGAGCTG
CAGCTGGAACTGGAATGGCACGGCGGCGCGGCTGGCGACACCTCAATGATCGATCGATTG
ATTGATCGTAACTCGTAA