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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0462200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:16226697:16230667:-1 gene:Os07g0462200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os07t0462200-01)
Sequence

ATGGCGTCCATCATCGTGCTCGCCTCCGTCCTCCTCCTCGACGTCATCGCCTTCGGCCTC
GCCGTCGCCGCCGAGCAGCGCCGCAGCAAGGCGACGGTGACGCCCGACTCGGAGAAGCTG
TACGACTACTGCGTCTACGACTCCGACATCGCCACCGGCTACGGCGTCGGCGCGCTCCTC
CTCCTCGCCGCCGCGCAGGCCGTCGTCATGCTCGCCAGCAAGTGTTTCTGCTGCGGCCGC
GGCCTCAAGCCCGGCGGATCCCGCGCCTGCGCCCTCATCCTCTTCCTCTTCGCATGGTTG
ACCTTCCTCATTGCTGAGGCATGCTTGATGGCCGGATCCATCCGGAATGCGTACCACACC
CGGTACAGGGGGATGTTCGTTGGCGAGTCCGTCTCCTGCGAGACTGTGCGCAAAGGTGTC
TTTGCTGCTGGTGCGGCCTTCACCTTCTTCACAGCCATCCTCAGCGAATTCTACTACGTT
AGCTACTCCAAGTCCCGCGATGCTGCTGGGGGTGCCCCGTACGGTGGCTCCAACATTGGC
ATGGGCACTTACAGCTAA

Peptide Sequence

PEP ID

Os07t0462200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:16226697:16230667:-1 gene:Os07g0462200 transcript:Os07t0462200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os07t0462200-01)
Sequence

MASIIVLASVLLLDVIAFGLAVAAEQRRSKATVTPDSEKLYDYCVYDSDIATGYGVGALL
LLAAAQAVVMLASKCFCCGRGLKPGGSRACALILFLFAWLTFLIAEACLMAGSIRNAYHT
RYRGMFVGESVSCETVRKGVFAAGAAFTFFTAILSEFYYVSYSKSRDAAGGAPYGGSNIG
MGTYS

Transcript Sequence

Transcript ID

Os07t0462200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:16226697:16230667:-1 gene:Os07g0462200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os07t0462200-01)
Sequence

ACGCTCACCAGCCGCAGCGGCGCGCCCCTCTCTCTCTCCTCTCCTTTTAACTACTACTCC
CCACGAGGAGCAGCCGCGAACACCACACACCACCTCACGCAGCAGCAGCGGCAGCAATGG
CGTCCATCATCGTGCTCGCCTCCGTCCTCCTCCTCGACGTCATCGCCTTCGGCCTCGCCG
TCGCCGCCGAGCAGCGCCGCAGCAAGGCGACGGTGACGCCCGACTCGGAGAAGCTGTACG
ACTACTGCGTCTACGACTCCGACATCGCCACCGGCTACGGCGTCGGCGCGCTCCTCCTCC
TCGCCGCCGCGCAGGCCGTCGTCATGCTCGCCAGCAAGTGTTTCTGCTGCGGCCGCGGCC
TCAAGCCCGGCGGATCCCGCGCCTGCGCCCTCATCCTCTTCCTCTTCGCATGGTTGACCT
TCCTCATTGCTGAGGCATGCTTGATGGCCGGATCCATCCGGAATGCGTACCACACCCGGT
ACAGGGGGATGTTCGTTGGCGAGTCCGTCTCCTGCGAGACTGTGCGCAAAGGTGTCTTTG
CTGCTGGTGCGGCCTTCACCTTCTTCACAGCCATCCTCAGCGAATTCTACTACGTTAGCT
ACTCCAAGTCCCGCGATGCTGCTGGGGGTGCCCCGTACGGTGGCTCCAACATTGGCATGG
GCACTTACAGCTAAAAGGAGCTTGCTGAACAGGATGATCCGGTCCTTGAGCTTGTTGGAT
TCAAGGTGGAGCATGTGATCGTGGAGTGCATTGTTCTTGTTAACACATTACCTTAGTTAC
GGTGTAATTGGTTGGGGTTTACTATCCCGTTAGGTTGTATGAGATTACTTGGTTGGGTTG
TACACTATTCGGATTATTGGATTGGATTCTGAACATGGAATACACGTATCCTAGTATGAT
GATGCGCT