Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0459400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:16029597:16033386:1 gene:Os07g0459400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os07t0459400-01)
Sequence

ATGGCGACGGGGGAGAAGGCGCCGCGGGCTTTCTCGATGGAGGAGCTCCCCGGCCACCTC
ATCGGGGAGGTCCTGACCTCCGGCCGCCTCGCCGCCGGGGACCTCGCGCGGCTCGAGGCC
ACGTGCCGCGCGCTCCGCCCGCTCGCCGAGCACGCCGCCTCCAGGCTCTGCGCCGCGCGG
GCGGCGTTCGCGGCCATGGGCCCCGCCGCGCGCGGGGAGCTCCTGGAGCGGTGCGGCGGC
AGCTGGAAGAAGGTGCTCAGGTTCCTGCAGTCCGTCGAGCAGTCCTCCGGCACCGTCCAC
ACCTCCTCCGGCAACATGCAAGTAGCGACAGGAAGATATCACACACTTTTGGTCCATGAC
TCTTCTGTCTATTCTTGTGGATCCAGTTTGTGTGGGGTGCTAGGTCATGGCCCAGATACA
ACCCAGTGTGCGGCATTCAGCAGGGTTCCCTTCCCATCACTTTCTCGTGTTGTCAACATC
TCTGCCTCTCACAACCATGCAGCTTTTGTCACAGAGTTAGGGGAGGTCTTCACTTGTGGA
GATAATTCATCATTATGCTGTGGTCACGGTGAGGTGGGGCGAACTATATTTCGACCAACC
GAAATAAAGGCCCTAAAAGGAATTTCTTGCAAACAGGTTGCCACTGGTTTAAGTTTTACT
GTCATTCTTACAACGGATGGGCAAGTATATACATGTGGAAGTAACACACATGGCCAGCTT
GGTCATGGTGACACAATAGACAGGGCTACTCCAAAGATCGTTGAATTATTTGAAGGCCTT
GCTCCGGTAGTGCAGGTTGCTGCTGGTGCCAGCTATACATTTGCTGTAACGGATGATGGA
ACAGTTTATTCCTTTGGCTCTTGTACCAACTTCTGCCTTGGACATGGAGATCAGCATGAT
GAACTTCGTCCACGTGCAATCCAGTCATTCAAGAGGAGGAATATTCATGTGGTTCGCGTG
TCTGCTGGTGATGAGCATGCTGTAGCTCTTGATGCACTGGGTTATGTTTATACATGGGGC
AGAGGTTACTGTGGAGCATTAGGCCATGGTGATGAGAATGACAAAACTAGCCCAGAATTG
ATCAGCAGTTTGAAGAGTCAAGTTGCTGTGCAGGTCTGTGCAAGGAAAAGAAAGACATTT
GTTCTTACTGATGAGGGCTCAGTTTTTGCATTCGGATGGATGGGCTTTGGGAGTTTAGGG
TTTCCTGACCGAGGATCATCCGACAAAGTAATGAGGCCTCGAGTCCTCGATAGTCTGCGT
GATCACTATGTTTCACAAATTAGCACTGGCCTGTACCACACTGTTGCAGTGACAAACAGA
GGCATTGTATTTGGGTTTGGGGACAACGAGCGCGCACAACTTGGGCAGGAGTACATTCGT
GGGTGCTTAAAACCTACAGAAATAATGTTCCAGAAGAGTATGGAAGAAATAGTAATTGCG
GCACCCAGCGGGTAA

Peptide Sequence

PEP ID

Os07t0459400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:16029597:16033386:1 gene:Os07g0459400 transcript:Os07t0459400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os07t0459400-01)
Sequence

MATGEKAPRAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRALRPLAEHAASRLCAAR
AAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHD
SSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVFTCG
DNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQL
GHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHD
ELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPEL
ISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLR
DHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIA
APSG

Transcript Sequence

Transcript ID

Os07t0459400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:16029597:16033386:1 gene:Os07g0459400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os07t0459400-01)
Sequence

GGGATTCTTCTCCGCTTCCCCCGCCCTCAAATCGCACCCCGGATTTACTCCCCCAATTCC
TCGCTCTGCTCTGCTGCTGGATTAGTGTTTCTTGGCGGGATTTGGTGAGCGATTGATTCG
ATTCGATTGGATTCGATTCGATTTGATCCGCCGGAGGGGAGGGGGGGAGCTCGCCGCGGA
GTTCGTCGCCATTTCGATCCGTACGGCGGCGTCGGGGTCGGCGTCGTCCTTGGATGATTC
CGATCGATCCAGGGGCAAGGCCGCCAAGATTTCGTCGGGCGGAGGCGGGGATCGCGGCGG
GAGGGGTGGATCCATGGCGACGGGGGAGAAGGCGCCGCGGGCTTTCTCGATGGAGGAGCT
CCCCGGCCACCTCATCGGGGAGGTCCTGACCTCCGGCCGCCTCGCCGCCGGGGACCTCGC
GCGGCTCGAGGCCACGTGCCGCGCGCTCCGCCCGCTCGCCGAGCACGCCGCCTCCAGGCT
CTGCGCCGCGCGGGCGGCGTTCGCGGCCATGGGCCCCGCCGCGCGCGGGGAGCTCCTGGA
GCGGTGCGGCGGCAGCTGGAAGAAGGTGCTCAGGTTCCTGCAGTCCGTCGAGCAGTCCTC
CGGCACCGTCCACACCTCCTCCGGCAACATGCAAGTAGCGACAGGAAGATATCACACACT
TTTGGTCCATGACTCTTCTGTCTATTCTTGTGGATCCAGTTTGTGTGGGGTGCTAGGTCA
TGGCCCAGATACAACCCAGTGTGCGGCATTCAGCAGGGTTCCCTTCCCATCACTTTCTCG
TGTTGTCAACATCTCTGCCTCTCACAACCATGCAGCTTTTGTCACAGAGTTAGGGGAGGT
CTTCACTTGTGGAGATAATTCATCATTATGCTGTGGTCACGGTGAGGTGGGGCGAACTAT
ATTTCGACCAACCGAAATAAAGGCCCTAAAAGGAATTTCTTGCAAACAGGTTGCCACTGG
TTTAAGTTTTACTGTCATTCTTACAACGGATGGGCAAGTATATACATGTGGAAGTAACAC
ACATGGCCAGCTTGGTCATGGTGACACAATAGACAGGGCTACTCCAAAGATCGTTGAATT
ATTTGAAGGCCTTGCTCCGGTAGTGCAGGTTGCTGCTGGTGCCAGCTATACATTTGCTGT
AACGGATGATGGAACAGTTTATTCCTTTGGCTCTTGTACCAACTTCTGCCTTGGACATGG
AGATCAGCATGATGAACTTCGTCCACGTGCAATCCAGTCATTCAAGAGGAGGAATATTCA
TGTGGTTCGCGTGTCTGCTGGTGATGAGCATGCTGTAGCTCTTGATGCACTGGGTTATGT
TTATACATGGGGCAGAGGTTACTGTGGAGCATTAGGCCATGGTGATGAGAATGACAAAAC
TAGCCCAGAATTGATCAGCAGTTTGAAGAGTCAAGTTGCTGTGCAGGTCTGTGCAAGGAA
AAGAAAGACATTTGTTCTTACTGATGAGGGCTCAGTTTTTGCATTCGGATGGATGGGCTT
TGGGAGTTTAGGGTTTCCTGACCGAGGATCATCCGACAAAGTAATGAGGCCTCGAGTCCT
CGATAGTCTGCGTGATCACTATGTTTCACAAATTAGCACTGGCCTGTACCACACTGTTGC
AGTGACAAACAGAGGCATTGTATTTGGGTTTGGGGACAACGAGCGCGCACAACTTGGGCA
GGAGTACATTCGTGGGTGCTTAAAACCTACAGAAATAATGTTCCAGAAGAGTATGGAAGA
AATAGTAATTGCGGCACCCAGCGGGTAAATTCAACTCCAAGATGCAATTTTAGTCCCAAT
AATATGCATATTGTTTCCATCCCAGGTTTCTTCTCTGCAAGTGTATTTTTATACTAGCTT
TCAGTGATTTGTGAGTATATGGTAAACGGGAGAAGATCAAAGTTGGAGGACAGTGTTGTA
GCTAAAGGAGCATATAGTGAGGTAATTTGGTGGTGTATTAAATAATTTAACTCGGCCATT
TTCTCATGTATAAAAATTATTGGTGTGATTAGAGTGACAAACTATTTCTTTCCCTTGGCT
CAGTTAGTTCAATCAAGTGTTGAACTGTTGGCTCTAGC