Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0458800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:15998528:16003262:1 gene:Os07g0458800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase 19. (Os07t0458800-01)
Sequence

ATGGACGAACCATCATCATCATCATCATCATCATATCCATCTTCCTCTGGTGGGAAAAAG
AAGCGACCACGCTCTCCTGGTCACAGCGATGAGCGTCCAGTGCACACAACCCAAATATAC
ACAAGCAGCCTTGAGGACACCCTTACGTTCAGTGATACCATGATTGCTCTTCAACTGATG
CGCACACAATTCCCAAAGCTAGAGAAGGTTGTGACAGAACCATTCATTTTGCAGTCACAG
TTGTATAGTAGTGTGAAGGACAGGACACAAGTTGATAGAGACCTTGAGTCCTTGAAGAAA
GACAAAGTATTGCGTGTATTCAAACTCAATACTGGGCAGGATGATCATGCAATCATGTTC
ATGGATGATTATCTGAAACAGATGGCGTTGGCAGTCAAGAGGTCAAGGGGTAAGGACCAA
GATGGTACTGAAGTTTTTGGGTGGTTTGAGAGATATGTTATTCATTTGAAGCTTGAAGTT
AGCATTGATCAGCGCGATCTGTTTTCTCTGTTATCACTTGGAGGTGATGTAACTGACAAA
CATATCACATTACTGATGAATGCTGGTCTCTTAACTCGCCAATTAATTGATCCAAACATG
TACTGGTTTTCTATACCAAGTATTGGTCCCGTCTTGAAAGGCCTAACCCAGGGAAGGAAG
GAAATTCTTTCATTATTGAACCGCAAGAAGTACAAGGAGATGCTACTCTCTTCACTGGAG
AAGACAAGATTACGGTTTTCACCTCTTGATGTGCGCTTTCACATTCGCGACTTAATTGGA
TCTGGGCACATAAAAACAGTTCAAACACCCACTGGTTTACTTGTTCGCATATCAAAAGAT
TGA

Peptide Sequence

PEP ID

Os07t0458800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:15998528:16003262:1 gene:Os07g0458800 transcript:Os07t0458800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase 19. (Os07t0458800-01)
Sequence

MDEPSSSSSSSYPSSSGGKKKRPRSPGHSDERPVHTTQIYTSSLEDTLTFSDTMIALQLM
RTQFPKLEKVVTEPFILQSQLYSSVKDRTQVDRDLESLKKDKVLRVFKLNTGQDDHAIMF
MDDYLKQMALAVKRSRGKDQDGTEVFGWFERYVIHLKLEVSIDQRDLFSLLSLGGDVTDK
HITLLMNAGLLTRQLIDPNMYWFSIPSIGPVLKGLTQGRKEILSLLNRKKYKEMLLSSLE
KTRLRFSPLDVRFHIRDLIGSGHIKTVQTPTGLLVRISKD

Transcript Sequence

Transcript ID

Os07t0458800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15998528:16003262:1 gene:Os07g0458800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase 19. (Os07t0458800-01)
Sequence

GCCGTCTCGTCTGCTCCGCTCATCTCGCTGCTGAACAGGGGAGGGGAGGGGAGGGGAGGG
GCGCTGATCTCCATCTCATCTGGCGAGGGGAGAGGAGGTGATCCTGATCTGGAAGAAGCT
CTTCTCTTAATTTCAGAGAGAGCCTTAACCTTAGTAACAGTTTGTTTGTTCCCCGAAAAG
TTCCCAAGTTGGATCCGCCCATGAATAATCAATAAAGCGAGATGGACGAACCATCATCAT
CATCATCATCATCATATCCATCTTCCTCTGGTGGGAAAAAGAAGCGACCACGCTCTCCTG
GTCACAGCGATGAGCGTCCAGTGCACACAACCCAAATATACACAAGCAGCCTTGAGGACA
CCCTTACGTTCAGTGATACCATGATTGCTCTTCAACTGATGCGCACACAATTCCCAAAGC
TAGAGAAGGTTGTGACAGAACCATTCATTTTGCAGTCACAGTTGTATAGTAGTGTGAAGG
ACAGGACACAAGTTGATAGAGACCTTGAGTCCTTGAAGAAAGACAAAGTATTGCGTGTAT
TCAAACTCAATACTGGGCAGGATGATCATGCAATCATGTTCATGGATGATTATCTGAAAC
AGATGGCGTTGGCAGTCAAGAGGTCAAGGGGTAAGGACCAAGATGGTACTGAAGTTTTTG
GGTGGTTTGAGAGATATGTTATTCATTTGAAGCTTGAAGTTAGCATTGATCAGCGCGATC
TGTTTTCTCTGTTATCACTTGGAGGTGATGTAACTGACAAACATATCACATTACTGATGA
ATGCTGGTCTCTTAACTCGCCAATTAATTGATCCAAACATGTACTGGTTTTCTATACCAA
GTATTGGTCCCGTCTTGAAAGGCCTAACCCAGGGAAGGAAGGAAATTCTTTCATTATTGA
ACCGCAAGAAGTACAAGGAGATGCTACTCTCTTCACTGGAGAAGACAAGATTACGGTTTT
CACCTCTTGATGTGCGCTTTCACATTCGCGACTTAATTGGATCTGGGCACATAAAAACAG
TTCAAACACCCACTGGTTTACTTGTTCGCATATCAAAAGATTGATAAATTCGAGTTTTTA
TTATTTGTTTGGT