Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0457300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:15912872:15917767:1 gene:Os07g0457300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1446 family protein. (Os07t0457300-01)
Sequence	ATGGAAGAACTTCATGACTGTGTGGTCCAGTTGAGGAGCAATCCTCAGCGGTGCAGGGAC ACCGTTTATGTTGGCTGTGGTGCTGGATTTGGGGGTGACCGGCCCATGGCTGCTCTCAAG TTGCTGGAGAGAGTCAAGGAACTTAACTACCTTGTGCTCGAGTGTTTGGCCGAGCGAACT CTCGTGGATCGCTACCAAATCATGATGTCGGGAGGAAAAGGATATGATCCCCGAGTTAAG GAGTGGCTGTCTGTGCTTCTACCCTTAGCCTTGGATAGAGGAGTTTGCATAATAACTAAC ATGGGCGCTGTGGATCCACTTGGAGCTCAAGAAGAAGTTCTGGAGCTGGCATCTAATTTG GGATTGGAAATAACAGTCGCTGTAGCTTATGAAACATCTTCAGGAAATTCTGTATTTTCT AATGAATCAACTGGGGTGCGACAGGGCGGAAGCACATATCTTGGTGTGGCCTCAATTGTA CACTGCCTAGAAAATGGCAAACCACAAGTTGTTATTACTTCTCGGGTTGCTGATGCTGCG CTGTTCTTAGCACCTATGGTATATGAATTAGGTTGGAATTGGAATGACTTTGAGGAGTTG TCACAAGGGACATTGGCTAGCCATCTTTTGGAATGTGGATGCCAACTCACTGGAGGGTAT TTCATGCACCCTGGAGATGCATATCGAGATTTTTCTTTTGAACAGCTTCTGGATTTGTCT CTTCCATATGCCGAAGTCAGTTACAAAGGAGAAGTGTTTGTTGGAAAGGCAGAGGGCAGC GGAGGTCTTCTAAGCTACAGCACATGTGCAGAACAGCTTCTGTACGAAGTTGGAGATCCT GCAAACTATATTACTCCTGATCTGGTTGTAGATTTCCGTGATGTGAAGTTCCAGCAAATA TCAAAAGACAAGGTCCAGTGCAAAGGAGCAAAACCATCCAATCCTTGCTGGCCCGAGAAA CTCCTCCAATTGCTTCCTACTGAGAGCGGATGGAAAGGCTGGGGAGAGATATCATACGGT GGCCAAGAATGTTTGAAGCGAGCTCATGCAGCAGAATACCTCGTTAGGTCATGGATGGAT GAAACATATCCTGGCATTGAAGGAAAAATTATCTCATACATAATAGGATATGATAGTTTG AAAGCCATTGGAGATAACAAAGACAGTTCTGTCAAACAAGTGATGGATGTCAGGTTCCGG ATGGATGGGCTATTTGAGCTGGAAGAACATGCTATCAAATTTGTTGAAGAGTTCATTGCA CTTTATACAAATGGGCCGGCTGGTGGTGGCGGCATAAGCACTGGGCAGAAGAAGGAAATA ACTCTGCAGAAAATACTGGTTGATCGGGAGAAGATCTTTTGGCAAGTAAATATGAAGAAA TCAAGTATTCCTTCTCCACAGAATCAGGCTACGAATGCTGACAAGGGTCAAATGTGTGAT CAACAACAACACAAGTGCCCAAGAAGGTGTGCAATGGGCACTCTTCCCTTGAACACAAAC ATGGACACACTGCCATCTGCTGTTCCTTCTCCATCTGGAACAAAGATTCCTCTATACCAC GTAGCTCACAGCAGGGCCGGTGATAAAGGGAATGATTTGAATTTCTCCATCATTCCGCAT TTCCCTGATGACATTGGTCGGCTGAGGGCAGTGATCACTCGAGATTGGGTCAAGAATGCT GTTTCACCCCTTCTTGATTCCTCCTTGTTTCCCGCTGATCGAGCAAATCAGGTTCGGTAT GATCCGCTCGAGAATGTAAGTATTGAGATTTATGATGTCCCAGGAATCAGCTCCCTGAAC GTTGTCGTGAGGAATATCCTCGATGGCGGTGTGAATTCTTCGAGAAGGATTGATCGGCAC GGGAAAACTCTATCAGATCTCATCTTGTGCCAGAATGTTGTCTTGCCTCCGTGA

Peptide Sequence

PEP ID	Os07t0457300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:15912872:15917767:1 gene:Os07g0457300 transcript:Os07t0457300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1446 family protein. (Os07t0457300-01)
Sequence	MEELHDCVVQLRSNPQRCRDTVYVGCGAGFGGDRPMAALKLLERVKELNYLVLECLAERT LVDRYQIMMSGGKGYDPRVKEWLSVLLPLALDRGVCIITNMGAVDPLGAQEEVLELASNL GLEITVAVAYETSSGNSVFSNESTGVRQGGSTYLGVASIVHCLENGKPQVVITSRVADAA LFLAPMVYELGWNWNDFEELSQGTLASHLLECGCQLTGGYFMHPGDAYRDFSFEQLLDLS LPYAEVSYKGEVFVGKAEGSGGLLSYSTCAEQLLYEVGDPANYITPDLVVDFRDVKFQQI SKDKVQCKGAKPSNPCWPEKLLQLLPTESGWKGWGEISYGGQECLKRAHAAEYLVRSWMD ETYPGIEGKIISYIIGYDSLKAIGDNKDSSVKQVMDVRFRMDGLFELEEHAIKFVEEFIA LYTNGPAGGGGISTGQKKEITLQKILVDREKIFWQVNMKKSSIPSPQNQATNADKGQMCD QQQHKCPRRCAMGTLPLNTNMDTLPSAVPSPSGTKIPLYHVAHSRAGDKGNDLNFSIIPH FPDDIGRLRAVITRDWVKNAVSPLLDSSLFPADRANQVRYDPLENVSIEIYDVPGISSLN VVVRNILDGGVNSSRRIDRHGKTLSDLILCQNVVLPP

Transcript Sequence

Transcript ID	Os07t0457300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:15912872:15917767:1 gene:Os07g0457300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1446 family protein. (Os07t0457300-01)
Sequence	GCACGTGCAGCTTTTCCCCCCTCCTCCAGCGTCGTCTCGCCTCCGCGCGCTCCCCGCCGG CGACGGCCCCGCCCCCTTGCCTCCTCTCTCGCGAGCACGGCCGCCGGCGAGCAGGTCTGG AGCAGCGACGCGCGCGGCCGGCCCCCCCATCGCGGTCCTCGAATCGAATCGGAGCTTCTT CCGGATTTTTCTCTGATTAAGAGCAATCTGTTAGTTCCGCTCCTGGTTCACTGAGGAATA ATTTGCCGTGGGATGCATCAGTAACAATGGAAGAACTTCATGACTGTGTGGTCCAGTTGA GGAGCAATCCTCAGCGGTGCAGGGACACCGTTTATGTTGGCTGTGGTGCTGGATTTGGGG GTGACCGGCCCATGGCTGCTCTCAAGTTGCTGGAGAGAGTCAAGGAACTTAACTACCTTG TGCTCGAGTGTTTGGCCGAGCGAACTCTCGTGGATCGCTACCAAATCATGATGTCGGGAG GAAAAGGATATGATCCCCGAGTTAAGGAGTGGCTGTCTGTGCTTCTACCCTTAGCCTTGG ATAGAGGAGTTTGCATAATAACTAACATGGGCGCTGTGGATCCACTTGGAGCTCAAGAAG AAGTTCTGGAGCTGGCATCTAATTTGGGATTGGAAATAACAGTCGCTGTAGCTTATGAAA CATCTTCAGGAAATTCTGTATTTTCTAATGAATCAACTGGGGTGCGACAGGGCGGAAGCA CATATCTTGGTGTGGCCTCAATTGTACACTGCCTAGAAAATGGCAAACCACAAGTTGTTA TTACTTCTCGGGTTGCTGATGCTGCGCTGTTCTTAGCACCTATGGTATATGAATTAGGTT GGAATTGGAATGACTTTGAGGAGTTGTCACAAGGGACATTGGCTAGCCATCTTTTGGAAT GTGGATGCCAACTCACTGGAGGGTATTTCATGCACCCTGGAGATGCATATCGAGATTTTT CTTTTGAACAGCTTCTGGATTTGTCTCTTCCATATGCCGAAGTCAGTTACAAAGGAGAAG TGTTTGTTGGAAAGGCAGAGGGCAGCGGAGGTCTTCTAAGCTACAGCACATGTGCAGAAC AGCTTCTGTACGAAGTTGGAGATCCTGCAAACTATATTACTCCTGATCTGGTTGTAGATT TCCGTGATGTGAAGTTCCAGCAAATATCAAAAGACAAGGTCCAGTGCAAAGGAGCAAAAC CATCCAATCCTTGCTGGCCCGAGAAACTCCTCCAATTGCTTCCTACTGAGAGCGGATGGA AAGGCTGGGGAGAGATATCATACGGTGGCCAAGAATGTTTGAAGCGAGCTCATGCAGCAG AATACCTCGTTAGGTCATGGATGGATGAAACATATCCTGGCATTGAAGGAAAAATTATCT CATACATAATAGGATATGATAGTTTGAAAGCCATTGGAGATAACAAAGACAGTTCTGTCA AACAAGTGATGGATGTCAGGTTCCGGATGGATGGGCTATTTGAGCTGGAAGAACATGCTA TCAAATTTGTTGAAGAGTTCATTGCACTTTATACAAATGGGCCGGCTGGTGGTGGCGGCA TAAGCACTGGGCAGAAGAAGGAAATAACTCTGCAGAAAATACTGGTTGATCGGGAGAAGA TCTTTTGGCAAGTAAATATGAAGAAATCAAGTATTCCTTCTCCACAGAATCAGGCTACGA ATGCTGACAAGGGTCAAATGTGTGATCAACAACAACACAAGTGCCCAAGAAGGTGTGCAA TGGGCACTCTTCCCTTGAACACAAACATGGACACACTGCCATCTGCTGTTCCTTCTCCAT CTGGAACAAAGATTCCTCTATACCACGTAGCTCACAGCAGGGCCGGTGATAAAGGGAATG ATTTGAATTTCTCCATCATTCCGCATTTCCCTGATGACATTGGTCGGCTGAGGGCAGTGA TCACTCGAGATTGGGTCAAGAATGCTGTTTCACCCCTTCTTGATTCCTCCTTGTTTCCCG CTGATCGAGCAAATCAGGTTCGGTATGATCCGCTCGAGAATGTAAGTATTGAGATTTATG ATGTCCCAGGAATCAGCTCCCTGAACGTTGTCGTGAGGAATATCCTCGATGGCGGTGTGA ATTCTTCGAGAAGGATTGATCGGCACGGGAAAACTCTATCAGATCTCATCTTGTGCCAGA ATGTTGTCTTGCCTCCGTGATCGCAGATATCTATCTGGTTCTGTAGCTTCCGACCGGGGC TTTTAGAAGCTTGAAAATTTGGCATGCAAATAGCCAGAGGTGAACCGATCCCTTTACCTT CATGAAGCTGCATTCGCTTATTGTATGTACCATGAGAAAAATACCAAGAACCGTCAAGTA TGTGCATTTCCAAGACATACCTTGGTTGCTATATTAGTTGATGAGATTTTAATGAGTTCC