Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0456500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:15875835:15881340:-1 gene:Os07g0456500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0456500-01)
Sequence

ATGAGCTTCAAATCTATTGACCGGTTAATTAGGAGGAACAGTAAGACCAAACTTTCTCGG
AATATTGTTGATGGTATTTATGACCAGAAGGAAGAGCAATATGTGCAATCCTTGAGGGAG
TTGCTTCTTGCAAACAACCAGCTTCCCGAGAAGTTTGATGACTATCATGTCCTACTACGC
TTTCTGAAAATGAGAGGATTTAACATAGTAAAGGCAAAAGAAATGTTTTTAAATATGCTA
AAATGGCGTGAAGAATGTGCTGTTGATGCCATTGCAAAGGATTTTAAATTTGAAGAGTAC
GATGCTGTAAAAAGATGCTATCCTCATGGATTTCATGGAGTTGATAGATTTGGCAGGCCA
TTGTATATCGAAAGGATTGGCTTGGTTGATCTCAATAAGCTCATGCAAGTATCTAGCACT
GATCGATATGTAAAGTATCATATATCAGAACAAGAGAAAACTTTATCCTTGAGATATCCA
GCTTGCTCCCTTGTGGCTAAGAAGCACATAGGCTCTACAACAGCCATATTTGATGTGAAA
GGATTGGGTATGAATAACTTTTCAAAATCTGGAAGGGACCTGTTCATAGAGATTCAAAAG
ATAGACAGCAATTACTATCCAGAGGTTTGTATGCCATGTCTAAACTTCAACGTCTTATCT
GTCTCTTATGATATTATAAGTGAAAGTTTTAGACAATATGCATGCAGGAGTTAG

Peptide Sequence

PEP ID

Os07t0456500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:15875835:15881340:-1 gene:Os07g0456500 transcript:Os07t0456500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0456500-01)
Sequence

MSFKSIDRLIRRNSKTKLSRNIVDGIYDQKEEQYVQSLRELLLANNQLPEKFDDYHVLLR
FLKMRGFNIVKAKEMFLNMLKWREECAVDAIAKDFKFEEYDAVKRCYPHGFHGVDRFGRP
LYIERIGLVDLNKLMQVSSTDRYVKYHISEQEKTLSLRYPACSLVAKKHIGSTTAIFDVK
GLGMNNFSKSGRDLFIEIQKIDSNYYPEVCMPCLNFNVLSVSYDIISESFRQYACRS

Transcript Sequence

Transcript ID

Os07t0456500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15875835:15881340:-1 gene:Os07g0456500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0456500-01)
Sequence

GCCTTGCCGGTTGCCCCTCGCCGGCGGCCTCGTAGCCGGAGCCCGTCCTCTCCGCCGCGC
CCGCGTCTGCCGGCTTGCTGGCGAGCTCGCGGGCCATTGCCGGAGCCCGTCGCATTGACC
GAATCGCGGGGCAAAACCACCACCATCCGCGCCATTGCTTCCGAGCGGCGGGAAAGGATC
GAGGATCCCCTTCCTTCTGCATATTGCGTTGCTTGCTTGCATCATTCTCCACCGCCACCG
CCGCTGCTGCCCCCCGCCTTTTTCTCTTCCCTTTTGCCGCCGAGGCGCGGTGCGGGCCAC
CGCCACGTGATGGAATGGAAGAGGAGCATACCGCCGCCTCAGGTTTTTGCTTCTTCCCCC
GCGCGCCATCTTGGTGCGGACGGCGGGAGATTCTCTGCGCACCCTATCGCCGCCTGCGGA
AGCAATCTGACTGGGCTATGCCCATCATGTGTTCGACGGAGTGCCGCAACGGCAAGAAAC
CTTAAGACTTCGTTTTTATTATATCTCCCCTAGGACAGAGGCGGAGGAGGATCAGGATTG
GTTATACATCAGGCCGTACCACGCCCTTGTATTCAAAACTTTAGCTTAGTGGTTTCTCCG
GCAAGTTGACAAGAAAAACTGATCATATCAAAGATGAGCTTCAAATCTATTGACCGGTTA
ATTAGGAGGAACAGTAAGACCAAACTTTCTCGGAATATTGTTGATGGTATTTATGACCAG
AAGGAAGAGCAATATGTGCAATCCTTGAGGGAGTTGCTTCTTGCAAACAACCAGCTTCCC
GAGAAGTTTGATGACTATCATGTCCTACTACGCTTTCTGAAAATGAGAGGATTTAACATA
GTAAAGGCAAAAGAAATGTTTTTAAATATGCTAAAATGGCGTGAAGAATGTGCTGTTGAT
GCCATTGCAAAGGATTTTAAATTTGAAGAGTACGATGCTGTAAAAAGATGCTATCCTCAT
GGATTTCATGGAGTTGATAGATTTGGCAGGCCATTGTATATCGAAAGGATTGGCTTGGTT
GATCTCAATAAGCTCATGCAAGTATCTAGCACTGATCGATATGTAAAGTATCATATATCA
GAACAAGAGAAAACTTTATCCTTGAGATATCCAGCTTGCTCCCTTGTGGCTAAGAAGCAC
ATAGGCTCTACAACAGCCATATTTGATGTGAAAGGATTGGGTATGAATAACTTTTCAAAA
TCTGGAAGGGACCTGTTCATAGAGATTCAAAAGATAGACAGCAATTACTATCCAGAGGTT
TGTATGCCATGTCTAAACTTCAACGTCTTATCTGTCTCTTATGATATTATAAGTGAAAGT
TTTAGACAATATGCATGCAGGAGTTAGTTCAATATATCCAGATGTTCATGGTTATTATTT
GCAAAATGTGATATTGCTTTGTAAATTACTCTTCCCTCTTATATAACAGTATAAAATTAT
ATGTAGGGGACTCCACTAATGTTCTTTGGTTAAAAAAAAAAGTAATATTGCTATATCTTT
CAGTTCAAACAAATAAATGTAAACAAAACACACTGATAAGGTTGGTCAATAACATGTCTG
ATAGAGCAGAAATAATACCCACTATATATGTCCTCTAGCACCCGTGTGCTCTGCTACAGT
GTGAATTCTAGAATAAGAAATGACAAAGTTATTGCATATGTTCAAAGCCATTAATCACTC
CTGTTTGGCTATATGGTGTCATGTATCAACGTAGTAAGGAATTTCATTGGAGACATTTTT
GTACCTTCACTTTCATCATATAGCTACTGATCTATTTTCTTGCCTCACAGCAGTCAGTAG
TTTCCACTCTCTATTTATGTGGTCTTGCTTCTGATACAGACATTAAATCAATTATACATA
ATCAATGCTGGTGCTGGATTTAGAGCACTGTGGAAAGTATTAAAAGCATGCATGGAGGCA
AGAACTTTAGCAAAGATTCAGGTTTTAGGGACCAATTATCTTAGTACAATACTAGAAGCA
GTTGACCCAAGTAATTTACCAGACTTCTTAGGGGGAACATGTACTTGTTCTGCAACTGGA
GGATGCTTGCTCCAAGATAAAGGACCTTGGACTGACCAGGAAATTTCTCAAGCTTCTAAG
GGAGTGTTTGGTAAAGGTCAGAAATCTTTCGATGAGATAAGTACTACAGTTGCCTGCGAA
AACTTTCCAGGTCACCAGGAGCCTTCTGTAGGAAAATTGCATCCCATTTCTGGCTGGAAA
CGTACTCTTGGCATGTTGTTGAAGGATAACCAGGTTGGCGATACGAATGAAAATATTCAA
CAGAATAAAGTGAATGAACAAATCTCAGAGAAGATCCAAGAACTTGAAAATTGCTCTGCT
CAGACCCAGGAGGTGAGCAAAGACCCTTCACGCACTACTACAGAAGCAGAATGAGCTTGC
GAACCACATTGAACAGTTGAGGAAGCTCCTCCGGGAGGCCGCAAATGCAGACAACAAAGC
AAACGTCCTAATCTTGAAGTGAAATTGCGTGCTTTCCAGCAGGAAGTGAAACGAGAAAAT
TTGAACCAGCATCGCATGGTAGAAATATTGCAGCATGGTAGAAAAGAAATACAGCAATAG
ACACGTCGGATAGTTCTCAGTAATGATTCCTTAATCGTTAGTCCCTTGGCTGGTAATCTA
ACACGAAGCAAATTAAGAAAGCAACCGTACACCATGATGATTTCAAAACGCAATGCAACT
TCTTTGTACACATGCTGCGTTCTGTTGTACATTTGTAACGCATCTTTTCAGAAGGGAAAA
TGTTGTATGTACCACATCCTTTCAGAAGGAAAAAATGTTGTATGTGTTACTTATGAAACT
ACTTCTCC