Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0456400-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:15869806:15874066:-1 gene:Os07g0456400 gene_biotype:protein_coding transcript_biotype:protein_coding description:LUC7 related family protein. (Os07t0456400-01);LUC7 related family protein. (Os07t0456400-02);Similar to predicted protein. (Os07t0456400-03)
Sequence	ATGGATGCGCAGCGAGCTCTCCTCGACGAGCTCATGGGCACAGCCCGCGACCTGACGGAG GAGGAGAGGAAGGCGCACAAGGAGGTGAGGTGGGACGACCCGGACGTGTGCGCCGCCTTC ATGGCCCGCTTCTGCCCCCACGACCTCTTCGTCAACACCAAGAGCAACCTCGGGCCGTGC ATGAAGATCCATGATCTGAAGCTTAAGGAGAGCTTTGAGAGTTCTCCCAGGCGTGAAACT CACATGCGAAGGTTTGAGGCGGAACTTGCTCAACAATGTGAGAAACTGGTTATAGATTTG GATAGAAAAATAAGGCGTGGTCGAGAAAGGTTGGCTCAAGATGTTGCTGTGCCACCTCCC GTCATAGGGAAAACATCTGAGCAGCTTTCAATTATAGAAGAAAAGGTCAAGAAGCTGTTG GAGCAAATTGAGGAGCTTGGTGAAGCTGGTAAAGTAGATGAAGCTGAGGCACTTATGAGG AAGGTTGAACTTCTAAATGCTGAGAAGACAGCTTTAACGAATCAAGCAGATAATAAAGTG GCTATGCTTCCACAAGAGAAGAAGATGGAACTTTGTGAAATATGTGGATCATTCTTAGTT GCAGATGATGTTCTTGAGAGGACACAATCCCATGTGACTGGGAAACAACATATTGGCTAT GGTTTGGTCAGAGATTTTCTAGCTGAACACAAGGCTGCAAAAGAGAAGGCAAGAGACGAA GAGAGGATTGCAAGGGAGAAGAAAGCAGAAGAACGTAGGAAACAGAGGGAAAAAGAGTAT GATGTTGGAGGCAGGGACGGTGGTTCTAGAAGAGAGAAGTCTGGGGATCGTGACTATGAC CGTGATCGTTACTATGACCGCAATCGTGGAAGAGAAAGGTCTCATGATCACAGAGATAGA GGATCAGAATATAGAAGCAGTTCCTACAGAAATGGTAGGGATTCTGAAAGAGACAGACAC CGATATAGGAGTGATGACATGAGAAAGGACAGGAGTAGAGTGAGGAGCAGGTCTCGTTCT CCAAGCAGGCATGGCCCAGATCAGTGA

Peptide Sequence

PEP ID	Os07t0456400-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:15869806:15874066:-1 gene:Os07g0456400 transcript:Os07t0456400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:LUC7 related family protein. (Os07t0456400-01);LUC7 related family protein. (Os07t0456400-02);Similar to predicted protein. (Os07t0456400-03)
Sequence	MDAQRALLDELMGTARDLTEEERKAHKEVRWDDPDVCAAFMARFCPHDLFVNTKSNLGPC MKIHDLKLKESFESSPRRETHMRRFEAELAQQCEKLVIDLDRKIRRGRERLAQDVAVPPP VIGKTSEQLSIIEEKVKKLLEQIEELGEAGKVDEAEALMRKVELLNAEKTALTNQADNKV AMLPQEKKMELCEICGSFLVADDVLERTQSHVTGKQHIGYGLVRDFLAEHKAAKEKARDE ERIAREKKAEERRKQREKEYDVGGRDGGSRREKSGDRDYDRDRYYDRNRGRERSHDHRDR GSEYRSSSYRNGRDSERDRHRYRSDDMRKDRSRVRSRSRSPSRHGPDQ

Transcript Sequence

Transcript ID	Os07t0456400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:15869806:15874066:-1 gene:Os07g0456400 gene_biotype:protein_coding transcript_biotype:protein_coding description:LUC7 related family protein. (Os07t0456400-01);LUC7 related family protein. (Os07t0456400-02);Similar to predicted protein. (Os07t0456400-03)
Sequence	AAAATCCCAAAACCGAAGGGAAACATAGCAGCCGGCTAAGGTTTCTCCCCCCTGCCGCGC CGCGCCGCCTCCCTCCAACGCCATGGATGCGCAGCGAGCTCTCCTCGACGAGCTCATGGG CACAGCCCGCGACCTGACGGAGGAGGAGAGGAAGGCGCACAAGGAGGTGAGGTGGGACGA CCCGGACGTGTGCGCCGCCTTCATGGCCCGCTTCTGCCCCCACGACCTCTTCGTCAACAC CAAGAGCAACCTCGGGCCGTGCATGAAGATCCATGATCTGAAGCTTAAGGAGAGCTTTGA GAGTTCTCCCAGGCGTGAAACTCACATGCGAAGGTTTGAGGCGGAACTTGCTCAACAATG TGAGAAACTGGTTATAGATTTGGATAGAAAAATAAGGCGTGGTCGAGAAAGGTTGGCTCA AGATGTTGCTGTGCCACCTCCCGTCATAGGGAAAACATCTGAGCAGCTTTCAATTATAGA AGAAAAGGTCAAGAAGCTGTTGGAGCAAATTGAGGAGCTTGGTGAAGCTGGTAAAGTAGA TGAAGCTGAGGCACTTATGAGGAAGGTTGAACTTCTAAATGCTGAGAAGACAGCTTTAAC GAATCAAGCAGATAATAAAGTGGCTATGCTTCCACAAGAGAAGAAGATGGAACTTTGTGA AATATGTGGATCATTCTTAGTTGCAGATGATGTTCTTGAGAGGACACAATCCCATGTGAC TGGGAAACAACATATTGGCTATGGTTTGGTCAGAGATTTTCTAGCTGAACACAAGGCTGC AAAAGAGAAGGCAAGAGACGAAGAGAGGATTGCAAGGGAGAAGAAAGCAGAAGAACGTAG GAAACAGAGGGAAAAAGAGTATGATGTTGGAGGCAGGGACGGTGGTTCTAGAAGAGAGAA GTCTGGGGATCGTGACTATGACCGTGATCGTTACTATGACCGCAATCGTGGAAGAGAAAG GTCTCATGATCACAGAGATAGAGGATCAGAATATAGAAGCAGTTCCTACAGAAATGGTAG GGATTCTGAAAGAGACAGACACCGATATAGGAGTGATGACATGAGAAAGGACAGGAGTAG AGTGAGGAGCAGGTCTCGTTCTCCAAGCAGGCATGGCCCAGATCAGTGAACATATAGATA GTTTTATTCCGAGTTAAAACTCATGAGGTAGACCATTATGTCCCTTTCGCCATTTAACCT GTTGTACAAATGAGTTTTGCGATGTGTTGCGCTTGTTGAATCTCTGTTCTGCTGTAACAG CTCTGTTGGGACCCTACAGTCTTCCTTTTAGAGGGGAAAAAATATCAGGTAGGTATTGTT TACCTTTCCTAGTATTTTGAGTTACCTATATTAACATACAGTGAGGTTTTGTTTCAACAT TTGAAACTGAAAATTAGTCTAATAAAGCTGAAAGCGT