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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0452500-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:15602028:15604561:-1 gene:Os07g0452500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ORMDL family protein. (Os07t0452500-01);ORMDL family protein. (Os07t0452500-02)
Sequence

ATGGGGCGGAGGGCGGGGTCCTACCCCTACTACGTGGAGGCGGCGCCGCCGGTGGACGTG
AACAAGAACACGGAGTGGTTCATGTACCCCGGGGTGTGGACCACCTACATCCTCCTCCTC
TTCTTCGCCTGGCTGCTCGTCCTCTCCGTCTCCGCCTGCTCCCCCGGGATCGCGTGGACC
GTCGTCAACCTCGCCCACTTCGCCATCACTTATCACTTCTTCCATTGGAAGAAGGGAACT
CCATTTGCTGCTGATGACCAAGGCATCTACAACAGACTAACTTGGTGGGAACAAATTGAT
AACGGGCAGCAACTTACTCGTAATAGGAAGTTCTTGACTGTGGTACCTGTGGTGCTGTAC
CTGATCGCGTCACACTTGACCGACTACAAACAGCCAATGCTTTTCCTCAACACCATTGCA
GTTCTGGTACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATC
AATGCAGATATCTGA

Peptide Sequence

PEP ID

Os07t0452500-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:15602028:15604561:-1 gene:Os07g0452500 transcript:Os07t0452500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ORMDL family protein. (Os07t0452500-01);ORMDL family protein. (Os07t0452500-02)
Sequence

MGRRAGSYPYYVEAAPPVDVNKNTEWFMYPGVWTTYILLLFFAWLLVLSVSACSPGIAWT
VVNLAHFAITYHFFHWKKGTPFAADDQGIYNRLTWWEQIDNGQQLTRNRKFLTVVPVVLY
LIASHLTDYKQPMLFLNTIAVLVLVVAKLPNMHKVRIFGINADI

Transcript Sequence

Transcript ID

Os07t0452500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15602028:15604561:-1 gene:Os07g0452500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ORMDL family protein. (Os07t0452500-01);ORMDL family protein. (Os07t0452500-02)
Sequence

ATCATCACACCATCACGAGCACCACCACCACTCACCACGCGCCACCCACCCCCGCACCGC
ACGCCAAGATCCGACCGCCGCCGCCGCCGCCGCCGGAGTAGGGAGAGGGAGAGGAGATGG
GGCGGAGGGCGGGGTCCTACCCCTACTACGTGGAGGCGGCGCCGCCGGTGGACGTGAACA
AGAACACGGAGTGGTTCATGTACCCCGGGGTGTGGACCACCTACATCCTCCTCCTCTTCT
TCGCCTGGCTGCTCGTCCTCTCCGTCTCCGCCTGCTCCCCCGGGATCGCGTGGACCGTCG
TCAACCTCGCCCACTTCGCCATCACTTATCACTTCTTCCATTGGAAGAAGGGAACTCCAT
TTGCTGCTGATGACCAAGGCATCTACAACAGACTAACTTGGTGGGAACAAATTGATAACG
GGCAGCAACTTACTCGTAATAGGAAGTTCTTGACTGTGGTACCTGTGGTGCTGTACCTGA
TCGCGTCACACTTGACCGACTACAAACAGCCAATGCTTTTCCTCAACACCATTGCAGTTC
TGGTACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATG
CAGATATCTGAGGACCATATGAAGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGA
GGGACAAGCGAACTTTGTGCAAACACGGTATCTAAAGTAGTGAAAAAACTAAACTTTTTC
ACCACTGCAATCTGTAGTATGTGCATAGGTGTAGGAAGAACCTGTAAATGTTACTGTAGC
TTATAATTTGCCTACAGGTTGGAGGCTGCTGCATGTTTGCTCATGCCACTTCCTTTAAGA
ACTCTAGTGGAGAGTGTAGACTGTAACTTAAATAAACATGTAATCTTGTGGATATGGAAA
GTTTGGTGGTTGTTAAAATGGTGAACCGGAGTTCAGTTCC