Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0452400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:15595751:15600607:1 gene:Os07g0452400 gene_biotype:protein_coding transcript_biotype:protein_coding description:3'-5' exonuclease domain containing protein. (Os07t0452400-01)
Sequence	ATGGACGCCGCCGCGCCCGCGCCGCCTGCCTCGCCGCCGCTCGCCGTGCACCTCGTCACC GGCGGCGGGTCCTCGCCGGAGCACGCGCTCCTCCTGCGCTCCCTCGCCGCGGCGCGCGTC GTCGCCCTCGACGCCGAGTGGAAGCCGCGCCGCCGCGGCCCCGCCGTCGCCGATGACCCT TCGGCGGCGGCGGCGGCTACTCCGCCCCCGCTGCAGTTCCCCACGGTCACGCTCCTCCAG GTGGCATGCCGCGGCGACGGCGACGGGGGAGGGGCTGCGGCTGCCGAGGTGTTCGTCGTC GACCTCCTCGCGGTGCCGCTGGCCGAATTGCGGGAGCCGCTGCGGGAGCTGTTCGAGAGG CCTGAGGTGCTGAAGCTGGGGTTCCGGTTCAAGCAGGACCTAGTGTACCTCTCGGCCACC TTCGCCGCTGCCCTCGGCTCCAGTGCCGGATTCGAGAGAGTGGAGCCTTTCTTGGATGTC ACCAACGCTTATTACTACCTGAAAGGCCATGACATGCAAAAGAGGCTTCCAAGGGAGACC AAGAGTTTGGCAACAATTTGTGAGGAACTGCTTGGTGTTTATTTATCAAAGGAACTTCAA TGTAGTGATTGGTCATACCGTCCCTTAAGTGAAGGTCAAATACAATATGCTGCATCTGAT GCCTACTATTTACTCGACATATTTGATCTATTCCATCAAAAAATCAGAACTGAAGGGAAG TGTTTGCCTACAAATGAGCTAACATCAGATGGCCATTGCCCCCAAAGGGACGCAGAATGT TCTTCGTCTGAAGATGCTGTTTGCTTTGATGACTATTTTACATCCGTTGTGATGAAGTAC GCTGAGAAGATTTTGCTTACAGAATCAGATACAAAACCACGTTCATCAAGACGAAAAGAA AAACAAAAACTTGCAACCAATGCCAAATGCAAAGAGAAGTTTGAGGGCAGTACTGAATGG CAGGGTCTTCCTCCATGGGATCCTTCTGCTGGTGGAGATGGCTGCCCAAAATTTTTGTGT GATGTGATGATTGAGGGTTTAGCTAAGCACTTGAGATGTGTTGGAATAGATGCTGCTACT CCATCCTCAAGGAAGCCTGAACCAAGGGAACTGTTAAATCAAACCTATAAGGAAAGAAGA GTATTACTTACAAGAGATGTCAAGCTCTTAAAATATCAATATTTGACAAGTAACCAGGTA TACAGAGTGAAGAGCCTTCTCAAACATGATCAACTGGCAGAGGTGATTGATACTTTCCAG TTAAAGATATCCGAGGATAAGCTTATGTCGAGATGTACAAAGTGCAATGGAAGATTCATC CAAAAACCGCTCACACTCGATGAGGCTATTGAAGCTTCAAAAGGTTTCCAGATTATCCCT TCCTGCCTCTTCAAGCGAAACTTGGAGTTCTGGAAGTGCACTGACTGCAACCAGCTCTAT TGGGAGGGTACTCAATACCACAATGCAGTTCAGAAGTTTTTGTCAGTATGCAACATTAGC GACTGA

Peptide Sequence

PEP ID	Os07t0452400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:15595751:15600607:1 gene:Os07g0452400 transcript:Os07t0452400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3'-5' exonuclease domain containing protein. (Os07t0452400-01)
Sequence	MDAAAPAPPASPPLAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDP SAAAAATPPPLQFPTVTLLQVACRGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFER PEVLKLGFRFKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRET KSLATICEELLGVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK CLPTNELTSDGHCPQRDAECSSSEDAVCFDDYFTSVVMKYAEKILLTESDTKPRSSRRKE KQKLATNAKCKEKFEGSTEWQGLPPWDPSAGGDGCPKFLCDVMIEGLAKHLRCVGIDAAT PSSRKPEPRELLNQTYKERRVLLTRDVKLLKYQYLTSNQVYRVKSLLKHDQLAEVIDTFQ LKISEDKLMSRCTKCNGRFIQKPLTLDEAIEASKGFQIIPSCLFKRNLEFWKCTDCNQLY WEGTQYHNAVQKFLSVCNISD

Transcript Sequence

Transcript ID	Os07t0452400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:15595751:15600607:1 gene:Os07g0452400 gene_biotype:protein_coding transcript_biotype:protein_coding description:3'-5' exonuclease domain containing protein. (Os07t0452400-01)
Sequence	ATGTAGACGATCCACCCGCTACCGCGACCCATCCCCAATCGCCGATGGACGCCGCCGCGC CCGCGCCGCCTGCCTCGCCGCCGCTCGCCGTGCACCTCGTCACCGGCGGCGGGTCCTCGC CGGAGCACGCGCTCCTCCTGCGCTCCCTCGCCGCGGCGCGCGTCGTCGCCCTCGACGCCG AGTGGAAGCCGCGCCGCCGCGGCCCCGCCGTCGCCGATGACCCTTCGGCGGCGGCGGCGG CTACTCCGCCCCCGCTGCAGTTCCCCACGGTCACGCTCCTCCAGGTGGCATGCCGCGGCG ACGGCGACGGGGGAGGGGCTGCGGCTGCCGAGGTGTTCGTCGTCGACCTCCTCGCGGTGC CGCTGGCCGAATTGCGGGAGCCGCTGCGGGAGCTGTTCGAGAGGCCTGAGGTGCTGAAGC TGGGGTTCCGGTTCAAGCAGGACCTAGTGTACCTCTCGGCCACCTTCGCCGCTGCCCTCG GCTCCAGTGCCGGATTCGAGAGAGTGGAGCCTTTCTTGGATGTCACCAACGCTTATTACT ACCTGAAAGGCCATGACATGCAAAAGAGGCTTCCAAGGGAGACCAAGAGTTTGGCAACAA TTTGTGAGGAACTGCTTGGTGTTTATTTATCAAAGGAACTTCAATGTAGTGATTGGTCAT ACCGTCCCTTAAGTGAAGGTCAAATACAATATGCTGCATCTGATGCCTACTATTTACTCG ACATATTTGATCTATTCCATCAAAAAATCAGAACTGAAGGGAAGTGTTTGCCTACAAATG AGCTAACATCAGATGGCCATTGCCCCCAAAGGGACGCAGAATGTTCTTCGTCTGAAGATG CTGTTTGCTTTGATGACTATTTTACATCCGTTGTGATGAAGTACGCTGAGAAGATTTTGC TTACAGAATCAGATACAAAACCACGTTCATCAAGACGAAAAGAAAAACAAAAACTTGCAA CCAATGCCAAATGCAAAGAGAAGTTTGAGGGCAGTACTGAATGGCAGGGTCTTCCTCCAT GGGATCCTTCTGCTGGTGGAGATGGCTGCCCAAAATTTTTGTGTGATGTGATGATTGAGG GTTTAGCTAAGCACTTGAGATGTGTTGGAATAGATGCTGCTACTCCATCCTCAAGGAAGC CTGAACCAAGGGAACTGTTAAATCAAACCTATAAGGAAAGAAGAGTATTACTTACAAGAG ATGTCAAGCTCTTAAAATATCAATATTTGACAAGTAACCAGGTATACAGAGTGAAGAGCC TTCTCAAACATGATCAACTGGCAGAGGTGATTGATACTTTCCAGTTAAAGATATCCGAGG ATAAGCTTATGTCGAGATGTACAAAGTGCAATGGAAGATTCATCCAAAAACCGCTCACAC TCGATGAGGCTATTGAAGCTTCAAAAGGTTTCCAGATTATCCCTTCCTGCCTCTTCAAGC GAAACTTGGAGTTCTGGAAGTGCACTGACTGCAACCAGCTCTATTGGGAGGGTACTCAAT ACCACAATGCAGTTCAGAAGTTTTTGTCAGTATGCAACATTAGCGACTGAGGAGCGCAAT ACTAATATATACTATTGCCGTATTACAGAGGAGTGCCAAGCTGCAGAGACTGTCTGACCT TTGGGGTTTTAGTCGCCCAGGATGGTGAAGATTTTTCATTTTATCGGTTTGCCATTCATC GTTTCCTTTTTTTCTCATTGCCCCGCAGTTGTTGTAAATAGCCAATCACTTCATCCGTTT CAAATAATAGTGGTGTGGCCCCCTCAGCCACCTGGGATCGAATTCCCACTAAACTGCAAA AAGAAAGACAAGGCTGAGAACGAAAGGAAACTGCTTGTTAAGTTGTACTACTACTGTACT TGAGACATGCAACAATACAGTTTAACTTG