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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0449100-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:15421991:15425210:-1 gene:Os07g0449100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Light induced protein like. (Os07t0449100-01)
Sequence

ATGGCATCAAAGCTTCAAGCCTTTTGGAACCATCCTGCTGGCCCTAAAACTATTCATTTC
TGGGCTCCAACATTTAAATGGGGTATCAGTATTGCCAATGTTGCGGACTTTGCTAAGCCT
CCTGAAAAGATATCCTATCCTCAGCAAGTCGCTGTGGCTTGCACTGGAGTCATTTGGTCT
CGCTACAGTATGGTTATCACACCGAAAAACTGGAATCTTTTCAGCGTTAATGTTGCAATG
GCTGGTACAGGCTTGTATCAGCTTTCTCGTAAAATAAGGAAAGATTACTTTTCTGATGAG
AAGGATGCTGCTGCATCACTGGAAGGATAA

Peptide Sequence

PEP ID

Os07t0449100-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:15421991:15425210:-1 gene:Os07g0449100 transcript:Os07t0449100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Light induced protein like. (Os07t0449100-01)
Sequence

MASKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQVAVACTGVIWS
RYSMVITPKNWNLFSVNVAMAGTGLYQLSRKIRKDYFSDEKDAAASLEG

Transcript Sequence

Transcript ID

Os07t0449100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15421991:15425210:-1 gene:Os07g0449100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Light induced protein like. (Os07t0449100-01)
Sequence

GAAGATCGAAGAAATAATCCCCCGGTAGGGAGCATATCGCTCCTCCGCTGCTGTCTCGCG
CGAGCGTCCGCCGCCTCGTCTCGGTGAAGAATCGCCGCCTCCCACCCTCTGCGAGCGCCG
CCGCCCTCCCCAACTCCGGCGACGACTATTCCCAAGGGTGCAGTGGAAGTGTAAACAGTT
TCTGTGGAAGGACAGAAAAGGCATTCATTTGCTAAATGGCATCAAAGCTTCAAGCCTTTT
GGAACCATCCTGCTGGCCCTAAAACTATTCATTTCTGGGCTCCAACATTTAAATGGGGTA
TCAGTATTGCCAATGTTGCGGACTTTGCTAAGCCTCCTGAAAAGATATCCTATCCTCAGC
AAGTCGCTGTGGCTTGCACTGGAGTCATTTGGTCTCGCTACAGTATGGTTATCACACCGA
AAAACTGGAATCTTTTCAGCGTTAATGTTGCAATGGCTGGTACAGGCTTGTATCAGCTTT
CTCGTAAAATAAGGAAAGATTACTTTTCTGATGAGAAGGATGCTGCTGCATCACTGGAAG
GATAATGACGACAGATTAGATTAACCGACCTACAGCCTTTGAGCCAGTCTCAGTTCACTC
TGGAGTCTGGACGTACTGCAGATATCTCTGGCTTTACCCAAGACAAGAACCTGTTGTTTC
TTTCTGTATTTCTTCTACACCCACTGCTGGAGCAGTTGAAAATATTGTCCCCAAAATCCA
AATAATGCTTTTTTGCATTTTGTGAAAATAATATGCATATACTC