Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0448800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:15406442:15409748:1 gene:Os07g0448800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLASMA MEMBRANE INTRINSIC PROTEIN 2A description:Aquaporin. (Os07t0448800-01);Non-protein coding transcript. (Os07t0448800-02)
Sequence

ATGGGGAAGGACGAGGTGATGGAGAGCGGCGGCGCCGCCGGCGAGTTCGCGGCCAAGGAC
TACACGGACCCGCCGCCGGCGCCGCTGATCGACGCGGCGGAGCTGGGGTCGTGGTCGCTG
TACCGCGCCGTCATCGCCGAGTTCATCGCCACGCTGCTGTTCCTGTACATCACCGTGGCC
ACGGTGATCGGGTACAAGCACCAGACGGACGCGTCGGCCTCCGGCGCCGACGCGGCGTGC
GGCGGCGTGGGCGTGCTCGGCATCGCGTGGGCGTTCGGCGGCATGATCTTCATCCTGGTC
TACTGCACCGCCGGCATCTCCGGCGGGCACATCAACCCGGCGGTGACGTTCGGGCTCTTC
CTGGCGCGCAAGGTGTCCCTGGTCCGCGCCATCCTCTACATCGTGGCGCAGTGCCTCGGC
GCCATCTGCGGCGTCGGCCTCGTCAAGGCGTTCCAGAGCGCCTACTTCAACAGGTACGGC
GGCGGCGCCAACACCCTCGCCGCCGGCTACTCCAAGGGCACCGGCCTCGCCGCCGAGATC
ATCGGCACCTTCGTGCTCGTCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCAACGCC
CGCGACTCACATGTCCCGGTCTTGGCGCCGCTGCCAATCGGCTTCGCCGTGTTCATGGTC
CACCTGGCGACGATCCCGATCACCGGCACCGGCATCAACCCGGCCAGGAGCATCGGAGCG
GCCGTCATCTTCAACAACGAGAAGGCGTGGCACAACCATTGGATCTTCTGGGTCGGCCCG
TTCGTCGGCGCCGCCATCGCGGCGTTCTACCACCAGTACATCCTCCGGGCCGGCGCCATC
AAAGCCCTCGGCTCCTTCAGGAGCAACGCGTGA

Peptide Sequence

PEP ID

Os07t0448800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:15406442:15409748:1 gene:Os07g0448800 transcript:Os07t0448800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLASMA MEMBRANE INTRINSIC PROTEIN 2A description:Aquaporin. (Os07t0448800-01);Non-protein coding transcript. (Os07t0448800-02)
Sequence

MGKDEVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVA
TVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF
LARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEI
IGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGA
AVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA

Transcript Sequence

Transcript ID

Os07t0448800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15406442:15409748:1 gene:Os07g0448800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLASMA MEMBRANE INTRINSIC PROTEIN 2A description:Aquaporin. (Os07t0448800-01);Non-protein coding transcript. (Os07t0448800-02)
Sequence

ACAAGCTCTCCGCTCAGCTAAGCTCTCCACCATTGCTTGCAAAGCTGGTCGTGTCACTCC
TCCCGTTAAGCTTCCCGCGGCGGCGAGAGCAAGCTAAGCTAGGTCGGGCATGGGGAAGGA
CGAGGTGATGGAGAGCGGCGGCGCCGCCGGCGAGTTCGCGGCCAAGGACTACACGGACCC
GCCGCCGGCGCCGCTGATCGACGCGGCGGAGCTGGGGTCGTGGTCGCTGTACCGCGCCGT
CATCGCCGAGTTCATCGCCACGCTGCTGTTCCTGTACATCACCGTGGCCACGGTGATCGG
GTACAAGCACCAGACGGACGCGTCGGCCTCCGGCGCCGACGCGGCGTGCGGCGGCGTGGG
CGTGCTCGGCATCGCGTGGGCGTTCGGCGGCATGATCTTCATCCTGGTCTACTGCACCGC
CGGCATCTCCGGCGGGCACATCAACCCGGCGGTGACGTTCGGGCTCTTCCTGGCGCGCAA
GGTGTCCCTGGTCCGCGCCATCCTCTACATCGTGGCGCAGTGCCTCGGCGCCATCTGCGG
CGTCGGCCTCGTCAAGGCGTTCCAGAGCGCCTACTTCAACAGGTACGGCGGCGGCGCCAA
CACCCTCGCCGCCGGCTACTCCAAGGGCACCGGCCTCGCCGCCGAGATCATCGGCACCTT
CGTGCTCGTCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCAACGCCCGCGACTCACA
TGTCCCGGTCTTGGCGCCGCTGCCAATCGGCTTCGCCGTGTTCATGGTCCACCTGGCGAC
GATCCCGATCACCGGCACCGGCATCAACCCGGCCAGGAGCATCGGAGCGGCCGTCATCTT
CAACAACGAGAAGGCGTGGCACAACCATTGGATCTTCTGGGTCGGCCCGTTCGTCGGCGC
CGCCATCGCGGCGTTCTACCACCAGTACATCCTCCGGGCCGGCGCCATCAAAGCCCTCGG
CTCCTTCAGGAGCAACGCGTGATATCAAAGGAGTTCGAGCAGCCATTGTTGGGGGATAAT
GGCTGGAAGGCGTTGATGAAGCAATTGGCCATGATGATGAGTTCTACCGTGTTATGATTC
TCCCTTTTTCAAAAAAATTAAGTTCGCCGCTGGTCGTTTTGTTTCAGCAGCTGCTCCTCC
TCCTGCTTGTCGTGTGTGTGAAGTGAACATCCATGTGTTTGTAATCTGTTTTTAAATCGA
GGGATGTCTCATGTGTTTAGCCTGTACTCCCATTTAATTTAGCGACGATAAGCATCGATG
CCCGCCTCTCCTATCTGGAATATACTCCCTCCGTCCC