Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0447800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:15339013:15351042:1 gene:Os07g0447800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III domain containing protein. (Os07t0447800-01)
Sequence

ATGGCAGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAG
CTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTA
AATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAAC
AAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATT
TCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTT
TTACAATTTGGATTGGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAG
ATAAATCATTGCCCAGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAAC
CGGAATGGTCTCAAATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGAT
ATCTTGGAGCGCGCTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTA
GAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGAT
CTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCAC
ATAGTCGTGGATGCAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCG
TTAGGCGCTATTACTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCAC
ATTCCAAATCCTGAGGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAAC
AAGGCAGACTTGGGCATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCA
AGTGGTCGTGAGTTAAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAA
GAGCACCCAGGCACTACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTT
ATTGAAAATAAACTTGGAGGGAAGCATCATCGTTTCAAGCGAGGGTACAAGAATGTAATA
GATGAGGCTATTCGTCTGAATACTATTGGTGAGGAGTCACATTTAGCTATGGAAACAAGT
GGCCATGGAGCACTGAAAGAGAATCACTGGCTCGATGATGGTGCATATCTTATGGTTAAA
CTTTTGAATAAGCTTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTG
ACTGATTTGGTCGAGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATT
GATCAGAATCATGCAGATTTGAAAGGGGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTG
AAACATTTGGAGAATGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTAT
GAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGAC
CCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTT
GCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTT
TTGCAGCAGTGA

Peptide Sequence

PEP ID

Os07t0447800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:15339013:15351042:1 gene:Os07g0447800 transcript:Os07t0447800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III domain containing protein. (Os07t0447800-01)
Sequence

MAAAQGSSVVPSSAKVDFLKLQNGSDIRGVAVGGVEGEPVNLTEPVTEAIASAFAAWLLN
KKKADGWRRLRISVGHDSRISAHKLQDAVTLGITTAGHDVLQFGLASTPAMFNSTLTEDE
INHCPVDGAIMITASHLPYNRNGLKFFTSAGGLNKADIKDILERASRIYEDSSHGSTQEL
EQASKGEVSNVDYMSIYASDLVKAVRKSAGNKEKPLEGLHIVVDAGNGAGGFFVDKVLKP
LGAITTGSQFLEPDGMFPNHIPNPEDKTAMKAITQAVADNKADLGIIFDTDVDRSAAVDS
SGRELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIENKLGGKHHRFKRGYKNVI
DEAIRLNTIGEESHLAMETSGHGALKENHWLDDGAYLMVKLLNKLAAARILNPNVGSKVL
TDLVEGLEEASVTVEIRLKIDQNHADLKGGSFRDYGEAVLKHLENAISKDEYLCKAPKNY
EGVRVSGYGGWFLLRLSLHDPVLPLNIEAPSKDDAIKLGLAVLTAVSEFPALDITALNKF
LQQ

Transcript Sequence

Transcript ID

Os07t0447800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15339013:15351042:1 gene:Os07g0447800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III domain containing protein. (Os07t0447800-01)
Sequence

ATAGATTATTCCGTCCGTTCCAACAACCTCTCCGCCTCCTCGTCCCCGTCCTCAACCTCA
CCGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCTGCTC
AAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCA
GTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGC
CTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGG
ATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAAT
TGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGAT
TGGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCC
CAGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCA
AATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCG
CTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGA
AGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAG
TTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATG
CAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTA
CTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAATCCTG
AGGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAACAAGGCAGACTTGG
GCATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGT
TAAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAAGAGCACCCAGGCA
CTACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTTATTGAAAATAAAC
TTGGAGGGAAGCATCATCGTTTCAAGCGAGGGTACAAGAATGTAATAGATGAGGCTATTC
GTCTGAATACTATTGGTGAGGAGTCACATTTAGCTATGGAAACAAGTGGCCATGGAGCAC
TGAAAGAGAATCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGC
TTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCG
AGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATG
CAGATTTGAAAGGGGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGA
ATGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTATGAAGGCGTAAGAG
TTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCC
TTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTG
CCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGAT
GGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGAT
GAGAGAAACGCACCACAGTACTATACATAGACGTACTTGCATTCAGGCTTACACATAATA
TTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAACA
AGGAAGACTAATTTTCGTGTTTTAAAGAAAATATACAAAGTAGTTGTCAGGAATCTTATA
TACCATCGTCAATGTGTTTTCGGATTGCTT