Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0446100-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:15237199:15238330:-1 gene:Os07g0446100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XBOS34 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0446100-01);Similar to Protein binding protein. (Os07t0446100-02)
Sequence

ATGGTTCCTGCTCAACCAGCGAATGCCCCACTGCCAAATCCATCATCAGCATCATCATTA
CCTTCAGTGATATCCACACCCAGCAAGGAGGATGCTGAGTTAGCAATGGCCATCAATGCC
TCCATCCTGTCAGCTATAGCCGAGGGAGTGCCCGATGTTCAGCCAATAACAACGACTACT
GCGACCAATGATTGGGGAAACCCTCCAAGCAACTCCCTCAATGGATGGGGCCCACCAGAT
ACTTCTGCGCCTTCAAAGACAAGTGGCCAAGTACCAGTTGTTACATCAAGCAGTAGCACA
TACAATGGGTGGGACGTGCCTGGAACAAGCTCTGGCCAAAGTTCGTCCAAACACAACAAA
AGCCAGAACAGCACTTTCGTGGTTCCGCAGGAGGCGCTTCCATCTCTTCCAGTCCCAACT
GCGCCTCCACTTGCCGTGGGAACCTTCTACGATGGTCCTATTCAGTATCCGTCAATAGAT
TCCACGCCAGTCGACGTAACCATGCCTTCTGCTGACGGTGGTACAGCGGTAAGCTCTGCA
AAACCTGCAGAGAACGAAGGTGATGCAAAACCTGCAGAAAGTGATGCTAATGCAAGCAAC
AGCGGTAACACTCCACCGGGAACCTGTGTTATTTGTTTGGATGCTCCTGTGGAAGGTGCC
TGCATTCCGTGTGGTCACATGGCTGGTTGCATGTCCTGCTTGAAGGATATAGAATCAAAG
AAATGGGGATGCCCCATTTGTCGAGCCAAGATTAACCAGATTATCCGCCTCTATGCAGTT
TGA

Peptide Sequence

PEP ID

Os07t0446100-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:15237199:15238330:-1 gene:Os07g0446100 transcript:Os07t0446100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XBOS34 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0446100-01);Similar to Protein binding protein. (Os07t0446100-02)
Sequence

MVPAQPANAPLPNPSSASSLPSVISTPSKEDAELAMAINASILSAIAEGVPDVQPITTTT
ATNDWGNPPSNSLNGWGPPDTSAPSKTSGQVPVVTSSSSTYNGWDVPGTSSGQSSSKHNK
SQNSTFVVPQEALPSLPVPTAPPLAVGTFYDGPIQYPSIDSTPVDVTMPSADGGTAVSSA
KPAENEGDAKPAESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESK
KWGCPICRAKINQIIRLYAV

Transcript Sequence

Transcript ID

Os07t0446100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:15237199:15238330:-1 gene:Os07g0446100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XBOS34 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0446100-01);Similar to Protein binding protein. (Os07t0446100-02)
Sequence

CAATAGTAAATCATCATTTTGTACAGAGGAAAAAATGCTGCATTTTTCTGAACCTCTTTG
TTTTAGGTTGCCAGCATGGTTCCTGCTCAACCAGCGAATGCCCCACTGCCAAATCCATCA
TCAGCATCATCATTACCTTCAGTGATATCCACACCCAGCAAGGAGGATGCTGAGTTAGCA
ATGGCCATCAATGCCTCCATCCTGTCAGCTATAGCCGAGGGAGTGCCCGATGTTCAGCCA
ATAACAACGACTACTGCGACCAATGATTGGGGAAACCCTCCAAGCAACTCCCTCAATGGA
TGGGGCCCACCAGATACTTCTGCGCCTTCAAAGACAAGTGGCCAAGTACCAGTTGTTACA
TCAAGCAGTAGCACATACAATGGGTGGGACGTGCCTGGAACAAGCTCTGGCCAAAGTTCG
TCCAAACACAACAAAAGCCAGAACAGCACTTTCGTGGTTCCGCAGGAGGCGCTTCCATCT
CTTCCAGTCCCAACTGCGCCTCCACTTGCCGTGGGAACCTTCTACGATGGTCCTATTCAG
TATCCGTCAATAGATTCCACGCCAGTCGACGTAACCATGCCTTCTGCTGACGGTGGTACA
GCGGTAAGCTCTGCAAAACCTGCAGAGAACGAAGGTGATGCAAAACCTGCAGAAAGTGAT
GCTAATGCAAGCAACAGCGGTAACACTCCACCGGGAACCTGTGTTATTTGTTTGGATGCT
CCTGTGGAAGGTGCCTGCATTCCGTGTGGTCACATGGCTGGTTGCATGTCCTGCTTGAAG
GATATAGAATCAAAGAAATGGGGATGCCCCATTTGTCGAGCCAAGATTAACCAGATTATC
CGCCTCTATGCAGTTTGAGCAATTCCAACAATCAAATAGTAGACATGGGAATGAACAATG
GGTGTTTGTTCTTCGTTACAAGTTCTGATGGAAAAAGAAAAGCTCCATCTGTAAAGTATG
TCATGCTGTCAGCTGTGATTTTGATGTTCCAATTGTACTGAAAAAATTATACATTCTGTG
TTATGTGCATTACGTGAAGCTATGAACGGTAGTACGATACATTACTATAGGGAACTTGTG
TACATATATATCTATGAGAACTATACAGTATACATAAGATTAATTGTTGGCT