Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0438700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:14741197:14746212:1 gene:Os07g0438700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0438700-01)
Sequence

ATGCTCGCTTGGAAGGAGAAGGTGGCGGACAGGCTCGCCCGCCTCCTCGCCGACTCCCCC
GCCTCCCCCTCCTCCGCCGCCGCCGCCGCCGCTGCCGTTGAGCCGCAGGCAACGCCTTTT
CCAGTGGAGCATTTTACTTCCCCTAAGAAAGGATCATTATCTTCTTACGTGATGTCCCTT
CTACCAACCTCAAATCCGGGACATGAAAGGACTTCACCGAGTTCACAGCATATGAAACCA
CTGCCTCCTGAATCGCTTCCTAAACGATGGAGGGGGAATGATTTCTTGTGGCATGATCCG
CCCCTGGCATTAAGTGAGGAATCTGGATCTGAAAGTGAGAGAGACGAAAGGAATGGAAAT
TCTAATAACGAGCAGATCCTGCAGTCACACAGGCCCATCGATAACTCAAATGGAAATGAA
GAAACATCAACATCAGACTGCACAGACTCTCTTTATTATTTAACTGAAAAGTCTACATTT
ATATCTCCAAAATTGTTTGGATTCTTTCAATCTTCTCTCCCTGGGACCTTAAAGGGTTGT
CACTGGGTTTTGCTATATAGCACTTGGAAGCATGGAACATCGCTAAGAACACTTTTCCGT
AGGAGTGAAAATCTCCAGGGTCCATGCCTATTGATTGTCGGAGACATGCGGGGGGCTGTG
TTTGGTGGCTTGTTAAATGGTCCTCTCAGGCCTACAGAGAAAAGAAAATACCAGGGAACT
AATCAGACATTTGTATTCACAACGATTTATGGTGAACCTAGGCTTTTCAGACCAACCGGT
GCCAACAGGTACTACTACTTATGCTTGAATGATGCTTTGGCATTTGGAGGAGGTGGGAGT
TTCGCGTTGTGCCTCGATGAAGATTTGTTACATGGAACCAGTGGATCATGTCAGACATTT
GGGAACTCATGCTTGGCTCATAGTCCAGATTTTGAACTGAAGAATGTTGAGCTGTGGGGT
TTTACTCATTCATGGGGTCGTTCAACATAG

Peptide Sequence

PEP ID

Os07t0438700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:14741197:14746212:1 gene:Os07g0438700 transcript:Os07t0438700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0438700-01)
Sequence

MLAWKEKVADRLARLLADSPASPSSAAAAAAAVEPQATPFPVEHFTSPKKGSLSSYVMSL
LPTSNPGHERTSPSSQHMKPLPPESLPKRWRGNDFLWHDPPLALSEESGSESERDERNGN
SNNEQILQSHRPIDNSNGNEETSTSDCTDSLYYLTEKSTFISPKLFGFFQSSLPGTLKGC
HWVLLYSTWKHGTSLRTLFRRSENLQGPCLLIVGDMRGAVFGGLLNGPLRPTEKRKYQGT
NQTFVFTTIYGEPRLFRPTGANRYYYLCLNDALAFGGGGSFALCLDEDLLHGTSGSCQTF
GNSCLAHSPDFELKNVELWGFTHSWGRST

Transcript Sequence

Transcript ID

Os07t0438700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:14741197:14746212:1 gene:Os07g0438700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0438700-01)
Sequence

ATTTCGCCTTCGCCTCTTTCCCTCTCCGCTGCATCGCCACCACCACGCAAAGCCACCGCC
TCCGCCGCGGCCGCCAAGAGCAGCAGCCGCCTCCGCCGCCGCCACCGCCGCCGCGCGGTC
GACGCAAGGGTAAGGGTAAGGGTAAGGGTAGGGCAGAGCGGACCGCGGCGGCGATGCTCG
CTTGGAAGGAGAAGGTGGCGGACAGGCTCGCCCGCCTCCTCGCCGACTCCCCCGCCTCCC
CCTCCTCCGCCGCCGCCGCCGCCGCTGCCGTTGAGCCGCAGGCAACGCCTTTTCCAGTGG
AGCATTTTACTTCCCCTAAGAAAGGATCATTATCTTCTTACGTGATGTCCCTTCTACCAA
CCTCAAATCCGGGACATGAAAGGACTTCACCGAGTTCACAGCATATGAAACCACTGCCTC
CTGAATCGCTTCCTAAACGATGGAGGGGGAATGATTTCTTGTGGCATGATCCGCCCCTGG
CATTAAGTGAGGAATCTGGATCTGAAAGTGAGAGAGACGAAAGGAATGGAAATTCTAATA
ACGAGCAGATCCTGCAGTCACACAGGCCCATCGATAACTCAAATGGAAATGAAGAAACAT
CAACATCAGACTGCACAGACTCTCTTTATTATTTAACTGAAAAGTCTACATTTATATCTC
CAAAATTGTTTGGATTCTTTCAATCTTCTCTCCCTGGGACCTTAAAGGGTTGTCACTGGG
TTTTGCTATATAGCACTTGGAAGCATGGAACATCGCTAAGAACACTTTTCCGTAGGAGTG
AAAATCTCCAGGGTCCATGCCTATTGATTGTCGGAGACATGCGGGGGGCTGTGTTTGGTG
GCTTGTTAAATGGTCCTCTCAGGCCTACAGAGAAAAGAAAATACCAGGGAACTAATCAGA
CATTTGTATTCACAACGATTTATGGTGAACCTAGGCTTTTCAGACCAACCGGTGCCAACA
GGTACTACTACTTATGCTTGAATGATGCTTTGGCATTTGGAGGAGGTGGGAGTTTCGCGT
TGTGCCTCGATGAAGATTTGTTACATGGAACCAGTGGATCATGTCAGACATTTGGGAACT
CATGCTTGGCTCATAGTCCAGATTTTGAACTGAAGAATGTTGAGCTGTGGGGTTTTACTC
ATTCATGGGGTCGTTCAACATAGTTGGCCTTGGATACATCATAAATGAAGCAATCCCAAA
TCCCAATTGCCCTCTAGTCTAGTCACTGTATACCTATTATTTTTTATTGTAACACCATTG
TTCTTATTGATTTAGGCAGTTTTTAAGTTCCCTTCAAACTTCTAAAAATTCCGTCGCATT
AAATGTTGTTCCCTTCAAACTTCTAAAAATTCCGTCACATTAAATGTTTGGACATATGTA
TAGAGCATTAAATGTGAACGAAAAAAATCAATTGCACAGTTTGCATGTAAATTGTGAGAC
GAATCTTTTGAGCCTAATTACGCCATGATTTTACAATATGATGCTACAGTAAACATTTGC
TAATGATGGATTAATTAGGCTTAATAAATTCGTCTCGCGGTTTACAGGCATAATCTGTAA
TTTGTTTT