Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0437500-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:14668015:14676605:1 gene:Os07g0437500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTOPHAN DECARBOXYLASE 2 description:Aromatic L-amino acid decarboxylase (AADC), Serotonin biosynthesis (Os07t0437500-01);Similar to Tryptophan decarboxylase. (Os07t0437500-02)
Sequence	ATGGAGGGAGTTGGCGGCGGCGGCGGCGGTGAGGAGTGGCTGCGGCCGATGGACGCGGAG CAGCTGCGGGAGTGCGGGCACCGGATGGTGGATTTCGTCGCCGACTACTACAAATCCATC GAGGCCTTCCCCGTCCTCAGCCAAGTCCAGCCAGGATATCTGAAGGAAGTTCTTCCAGAT TCAGCCCCAAGACAACCTGATACTTTGGATTCCCTTTTTGATGATATTCAACAAAAAATA ATACCAGGAGTAACGCACTGGCAAAGTCCAAATTATTTTGCTTACTATCCTTCAAATAGC AGCACTGCTGGATTCCTGGGGGAGATGCTTAGTGCTGCCTTTAACATTGTTGGCTTCAGT TGGATAACCTCTCCTGCTGCTACTGAGCTAGAGGTTATAGTCTTAGACTGGTTTGCAAAA ATGCTCCAGCTTCCAAGCCAGTTTCTGTCAACTGCTCTTGGTGGAGGAGTAATACAAGGT ACTGCCAGTGAAGCTGTTCTTGTTGCACTATTGGCTGCACGAGATAGAGCTTTAAAGAAG CATGGGAAGCATTCCCTTGAAAAGTTAGTAGTTTATGCATCTGACCAGACACATTCTGCT CTACAAAAGGCATGCCAGATTGCAGGAATTTTCTCAGAGAATGTTAGGGTTGTAATTGCT GATTGTAATAAGAACTACGCCGTTGCCCCTGAGGCAGTTAGTGAGGCGCTTTCCATAGAC CTGTCATCTGGTTTGATACCATTTTTCATCTGTGCAACAGTAGGTACAACATCATCATCA GCTGTGGACCCCCTGCCTGAACTAGGACAGATAGCAAAGTCCAATGACATGTGGTTCCAT ATTGATGCCGCATATGCTGGAAGTGCTTGTATATGCCCAGAGTACCGACACCACCTCAAT GGAGTGGAAGAAGCTGATTCGTTTAATATGAATGCCCACAAATGGTTCCTCACTAACTTC GATTGTTCCTTGCTATGGGTTAAGGACAGGAGTTTTCTCATACAATCATTGTCTACGAAT CCAGAGTTTCTCAAAAACAAGGCTTCCCAAGCTAATTCAGTTGTTGATTTCAAAGATTGG CAAATTCCACTTGGACGACGCTTTAGATCACTTAAGCTATGGATGGTCTTGAGACTTTAT GGTGTGGACAACCTACAAAGCTATATCCGGAAACACATACATTTGGCTGAACATTTTGAG CAACTTTTATTATCTGATTCAAGATTTGAGGTAGTGACTCCAAGGACTTTTTCACTTGTT TGTTTCCGACTTGTGCCTCCCACTTCTGACCATGAAAATGGACGTAAATTGAATTACGAT ATGATGGATGGTGTAAATTCAAGTGGAAAGATCTTCCTATCTCACACGGTTCTTTCAGGT AAGTTCGTCTTGAGATTTGCAGTAGGAGCGCCACTTACAGAGGAGCGACACGTGGATGCC GCTTGGAAGCTTCTACGAGATGAGGCCACCAAGGTCTTGGGGAAAATGGTGTAG

Peptide Sequence

PEP ID	Os07t0437500-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:14668015:14676605:1 gene:Os07g0437500 transcript:Os07t0437500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTOPHAN DECARBOXYLASE 2 description:Aromatic L-amino acid decarboxylase (AADC), Serotonin biosynthesis (Os07t0437500-01);Similar to Tryptophan decarboxylase. (Os07t0437500-02)
Sequence	MEGVGGGGGGEEWLRPMDAEQLRECGHRMVDFVADYYKSIEAFPVLSQVQPGYLKEVLPD SAPRQPDTLDSLFDDIQQKIIPGVTHWQSPNYFAYYPSNSSTAGFLGEMLSAAFNIVGFS WITSPAATELEVIVLDWFAKMLQLPSQFLSTALGGGVIQGTASEAVLVALLAARDRALKK HGKHSLEKLVVYASDQTHSALQKACQIAGIFSENVRVVIADCNKNYAVAPEAVSEALSID LSSGLIPFFICATVGTTSSSAVDPLPELGQIAKSNDMWFHIDAAYAGSACICPEYRHHLN GVEEADSFNMNAHKWFLTNFDCSLLWVKDRSFLIQSLSTNPEFLKNKASQANSVVDFKDW QIPLGRRFRSLKLWMVLRLYGVDNLQSYIRKHIHLAEHFEQLLLSDSRFEVVTPRTFSLV CFRLVPPTSDHENGRKLNYDMMDGVNSSGKIFLSHTVLSGKFVLRFAVGAPLTEERHVDA AWKLLRDEATKVLGKMV

Transcript Sequence

Transcript ID	Os07t0437500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:14668015:14676605:1 gene:Os07g0437500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTOPHAN DECARBOXYLASE 2 description:Aromatic L-amino acid decarboxylase (AADC), Serotonin biosynthesis (Os07t0437500-01);Similar to Tryptophan decarboxylase. (Os07t0437500-02)
Sequence	ACAGCCCGCGCCCGCCTTCTCCCCTATCTATCATTCTATCCCGCCCGCTTCCTTCTCCCC CGCGGCCGGACTGCAACTGTAACCCAATTCCTCCTCCCTCCTCGATCACCATGGAGGGAG TTGGCGGCGGCGGCGGCGGTGAGGAGTGGCTGCGGCCGATGGACGCGGAGCAGCTGCGGG AGTGCGGGCACCGGATGGTGGATTTCGTCGCCGACTACTACAAATCCATCGAGGCCTTCC CCGTCCTCAGCCAAGTCCAGCCAGGATATCTGAAGGAAGTTCTTCCAGATTCAGCCCCAA GACAACCTGATACTTTGGATTCCCTTTTTGATGATATTCAACAAAAAATAATACCAGGAG TAACGCACTGGCAAAGTCCAAATTATTTTGCTTACTATCCTTCAAATAGCAGCACTGCTG GATTCCTGGGGGAGATGCTTAGTGCTGCCTTTAACATTGTTGGCTTCAGTTGGATAACCT CTCCTGCTGCTACTGAGCTAGAGGTTATAGTCTTAGACTGGTTTGCAAAAATGCTCCAGC TTCCAAGCCAGTTTCTGTCAACTGCTCTTGGTGGAGGAGTAATACAAGGTACTGCCAGTG AAGCTGTTCTTGTTGCACTATTGGCTGCACGAGATAGAGCTTTAAAGAAGCATGGGAAGC ATTCCCTTGAAAAGTTAGTAGTTTATGCATCTGACCAGACACATTCTGCTCTACAAAAGG CATGCCAGATTGCAGGAATTTTCTCAGAGAATGTTAGGGTTGTAATTGCTGATTGTAATA AGAACTACGCCGTTGCCCCTGAGGCAGTTAGTGAGGCGCTTTCCATAGACCTGTCATCTG GTTTGATACCATTTTTCATCTGTGCAACAGTAGGTACAACATCATCATCAGCTGTGGACC CCCTGCCTGAACTAGGACAGATAGCAAAGTCCAATGACATGTGGTTCCATATTGATGCCG CATATGCTGGAAGTGCTTGTATATGCCCAGAGTACCGACACCACCTCAATGGAGTGGAAG AAGCTGATTCGTTTAATATGAATGCCCACAAATGGTTCCTCACTAACTTCGATTGTTCCT TGCTATGGGTTAAGGACAGGAGTTTTCTCATACAATCATTGTCTACGAATCCAGAGTTTC TCAAAAACAAGGCTTCCCAAGCTAATTCAGTTGTTGATTTCAAAGATTGGCAAATTCCAC TTGGACGACGCTTTAGATCACTTAAGCTATGGATGGTCTTGAGACTTTATGGTGTGGACA ACCTACAAAGCTATATCCGGAAACACATACATTTGGCTGAACATTTTGAGCAACTTTTAT TATCTGATTCAAGATTTGAGGTAGTGACTCCAAGGACTTTTTCACTTGTTTGTTTCCGAC TTGTGCCTCCCACTTCTGACCATGAAAATGGACGTAAATTGAATTACGATATGATGGATG GTGTAAATTCAAGTGGAAAGATCTTCCTATCTCACACGGTTCTTTCAGGTAAGTTCGTCT TGAGATTTGCAGTAGGAGCGCCACTTACAGAGGAGCGACACGTGGATGCCGCTTGGAAGC TTCTACGAGATGAGGCCACCAAGGTCTTGGGGAAAATGGTGTAGATAAGTGAATACCGCT CACTGATTCAGCTCATTGTTTGCCCTTCGAGTATTGAAGGTGCCAAAGTTCATACAAAAA GTTTCTGTTAAGGACAATACACGATAGCATAATTTATTCAGTTGTGAAACAGAAATACTG AATACTTTCTATGATTCTTTTAGTGGGTTAGGTCGTTTGATCGACCTGCAATTTTTTTCG