Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0436600-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:14606243:14607901:1 gene:Os07g0436600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0436600-00)
Sequence	ATGCGGCCTCTCCCGCCGGCCGTGGCGGCGCGCCTCGCCGCCGTCCGCGCCGACCCAGCC GCCGTCCCGCTCCCGTTCTTCAACTCCCTCCTCTCCGCGCTCGCCTCCTCCCACGCCCAC CTCCCGCTCCACCTCTTCCGCCGCCTCCTCCTCCCGCGCCGCCGCCCCGACGCCTTCACG CTCTCCTCCCTCGCCGCCTCTCTCCTCCCGCCGGCCCACTCTCCCTCCGCCTCCGTCACC GCCGCCGCCGCCGCCGCCGGGTGCCTCCACGCCTTCTCCCTCCGCCTCGGCCTCCTCCGC GCCGACCCCGTCCTCGCCAACTCCTTCCTCCTCCTCTACCTCCGCGCCGCGTCGCCAGGC CTCGCGCGCAGGCTGTTCGACGAAATGCCCGCGCGCACCGCCTCCACCTACAACACCCTC ATCTCGCACTCGCCCCCGGGTGTCGACGTCTGGCCCGTCGTGCGGCACATGGTCGAGGAC GGGTGCGTGCCGGACCGGTTCACGGTCTCGTCGATCCTGCCAGCGTGCGAGTCCGAACTC CGGGGCAGGGAGCTTCATTGCTTCGCTCTGAAGAGTGGGATGTGCGGGGCAGGCGATTTC CATGTTGGGAGCAGCCTCGTGTCAATGTACTTCAGGGTTGGCCAACCAGGACATGCACGC CGGGTTTTCGATGGGATGGAGCAGAGGAATGTGGTTTCTTGGACTGCAATGGTTGGAGGG TTCACAGAGAGCGGGATGTTTGAGGATGCCGTGGATGCTTTCCGGGCAATGTGGGTGATC GGTGCTGTTCTGCCAAACAGGATTGCGCTGATTAGTGTGCTCTCAGCTGTGGAGGCCCTC ACAGATTTGGCTGCTGGGAAACAGGTGCATGGCTTTGCGGTCAGGATGGGATTGTCTGGG GAAGTATCCCTGAACAATGCTTTGATTGTTATGTACGTCAAATGCGGGGTCTTGTGGTAT GCACGGCAGATCTTTGATGATGGTAGATGGTGCAAAGATGTGATCTCGTGGTGTTCGATG ATTCAGGGGTATGGCCTTCATGGGAAGGGTGCAGAAGCAGTTGCCCTGTTTGATCAGATG CATATTTCTGGGGTTAAGCCAGACAGCATAACTGGCTTGGGTGTGCTTTCAGCTTGTTCT AGGGCAGGGTTGGTTTTTAAGGGCCTTGAGATATACAACTCTCTGGTGAAGGATTATGGA GTTCATCCAACTGAGGAGATGTCTGCTTGCATAGTTGATTTACTTGGTCGATCGGGGATG ATTAATCAGGCCTTGGACTTTATAAAGTCAATGAGTATAGAGCCAGGCCCTAGTGTCTGG GGAGCACTTCTGGATGCCTCCATTGTTCACAATAACAAAGAAATTCAAGATTTGTCCTGC AGATACCTTCTTAGACTGGAAGAAGGGAACCCATCTAATCTTGTCTCAGTATCTAATCTG CATGCCTTTGATGGAAGCTGGAATATTGTCGAACATGTGAGGGCTAAGATTAAACAAGGG GCATTGAAGAAGATCCCTGGTTTTAGTTGGATAAATCCAACATAA

Peptide Sequence

PEP ID	Os07t0436600-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:14606243:14607901:1 gene:Os07g0436600 transcript:Os07t0436600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0436600-00)
Sequence	MRPLPPAVAARLAAVRADPAAVPLPFFNSLLSALASSHAHLPLHLFRRLLLPRRRPDAFT LSSLAASLLPPAHSPSASVTAAAAAAGCLHAFSLRLGLLRADPVLANSFLLLYLRAASPG LARRLFDEMPARTASTYNTLISHSPPGVDVWPVVRHMVEDGCVPDRFTVSSILPACESEL RGRELHCFALKSGMCGAGDFHVGSSLVSMYFRVGQPGHARRVFDGMEQRNVVSWTAMVGG FTESGMFEDAVDAFRAMWVIGAVLPNRIALISVLSAVEALTDLAAGKQVHGFAVRMGLSG EVSLNNALIVMYVKCGVLWYARQIFDDGRWCKDVISWCSMIQGYGLHGKGAEAVALFDQM HISGVKPDSITGLGVLSACSRAGLVFKGLEIYNSLVKDYGVHPTEEMSACIVDLLGRSGM INQALDFIKSMSIEPGPSVWGALLDASIVHNNKEIQDLSCRYLLRLEEGNPSNLVSVSNL HAFDGSWNIVEHVRAKIKQGALKKIPGFSWINPT

Transcript Sequence

Transcript ID	Os07t0436600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:14606243:14607901:1 gene:Os07g0436600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0436600-00)
Sequence	CATGCGGCCTCTCCCGCCGGCCGTGGCGGCGCGCCTCGCCGCCGTCCGCGCCGACCCAGC CGCCGTCCCGCTCCCGTTCTTCAACTCCCTCCTCTCCGCGCTCGCCTCCTCCCACGCCCA CCTCCCGCTCCACCTCTTCCGCCGCCTCCTCCTCCCGCGCCGCCGCCCCGACGCCTTCAC GCTCTCCTCCCTCGCCGCCTCTCTCCTCCCGCCGGCCCACTCTCCCTCCGCCTCCGTCAC CGCCGCCGCCGCCGCCGCCGGGTGCCTCCACGCCTTCTCCCTCCGCCTCGGCCTCCTCCG CGCCGACCCCGTCCTCGCCAACTCCTTCCTCCTCCTCTACCTCCGCGCCGCGTCGCCAGG CCTCGCGCGCAGGCTGTTCGACGAAATGCCCGCGCGCACCGCCTCCACCTACAACACCCT CATCTCGCACTCGCCCCCGGGTGTCGACGTCTGGCCCGTCGTGCGGCACATGGTCGAGGA CGGGTGCGTGCCGGACCGGTTCACGGTCTCGTCGATCCTGCCAGCGTGCGAGTCCGAACT CCGGGGCAGGGAGCTTCATTGCTTCGCTCTGAAGAGTGGGATGTGCGGGGCAGGCGATTT CCATGTTGGGAGCAGCCTCGTGTCAATGTACTTCAGGGTTGGCCAACCAGGACATGCACG CCGGGTTTTCGATGGGATGGAGCAGAGGAATGTGGTTTCTTGGACTGCAATGGTTGGAGG GTTCACAGAGAGCGGGATGTTTGAGGATGCCGTGGATGCTTTCCGGGCAATGTGGGTGAT CGGTGCTGTTCTGCCAAACAGGATTGCGCTGATTAGTGTGCTCTCAGCTGTGGAGGCCCT CACAGATTTGGCTGCTGGGAAACAGGTGCATGGCTTTGCGGTCAGGATGGGATTGTCTGG GGAAGTATCCCTGAACAATGCTTTGATTGTTATGTACGTCAAATGCGGGGTCTTGTGGTA TGCACGGCAGATCTTTGATGATGGTAGATGGTGCAAAGATGTGATCTCGTGGTGTTCGAT GATTCAGGGGTATGGCCTTCATGGGAAGGGTGCAGAAGCAGTTGCCCTGTTTGATCAGAT GCATATTTCTGGGGTTAAGCCAGACAGCATAACTGGCTTGGGTGTGCTTTCAGCTTGTTC TAGGGCAGGGTTGGTTTTTAAGGGCCTTGAGATATACAACTCTCTGGTGAAGGATTATGG AGTTCATCCAACTGAGGAGATGTCTGCTTGCATAGTTGATTTACTTGGTCGATCGGGGAT GATTAATCAGGCCTTGGACTTTATAAAGTCAATGAGTATAGAGCCAGGCCCTAGTGTCTG GGGAGCACTTCTGGATGCCTCCATTGTTCACAATAACAAAGAAATTCAAGATTTGTCCTG CAGATACCTTCTTAGACTGGAAGAAGGGAACCCATCTAATCTTGTCTCAGTATCTAATCT GCATGCCTTTGATGGAAGCTGGAATATTGTCGAACATGTGAGGGCTAAGATTAAACAAGG GGCATTGAAGAAGATCCCTGGTTTTAGTTGGATAAATCCAACATAATGAGGTAATAATGA TTGCAATGAATTATTAATGGTCCTCTCAGCATATCCCTGAACCCTAGCAGCATTGTTTAG CTGGTTGTGCTATGGAACCTGTTATATTGGACATGAACA