Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0435400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:14534613:14541912:-1 gene:Os07g0435400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-143 description:Similar to WD40. (Os07t0435400-01);Non-protein coding transcript. (Os07t0435400-02)
Sequence	ATGGGGCACAGCGACGGCGACCACGGTAGCGACCTCTCCGCCGACGATTCCCCGTGGAGC GAGGGGAGCTGGTCCGACGACGATGACGAGGGATCGCTATCCTTCGAGGACAGCGGCGAA GGCTCCGACGCCGAGTCCGACGAACCGGATGCCCCGGCGGTGGAGGAGAGCGACTCTTCT GAGGACGAGGTGGCGCCACGGAATACGATAGGAGATGTGCCGTTGGAATGGTACAAGAAC GAGGAGCACATCGGCTATGACATCACTGGTAGTAAGATCAAGAAGCGGGATAGGGAGGGC CGAATTGAGGCCTACCTCAGGAATGCTGATGATGCTAAGAATTGGAGAAAGATCTATGAC GAGTATAATGATGAAGAGGTGCAGATTACCAAGGAAGAGGCTAAGATAATTAGTAGATTG CTGAAGGGAAAGACTCCACACACAAATGTGGATCCATATCCAGATTATGTTGATTGGTTT GAATATGATGGTAAAGGCCATCCACTTTCTAGTGCTCCGGAGCCAAAGAGGCGATTTGTA CCCTCGAGGTGGGAACAGAAGAAGGTTGTTAAACTTGTTAGAGCCATTCGTAAAGGATGG ATAAAGTTTGATAAGCCAAAGGAGGAACCTAACTTTTATCTCTTGTGGGGAGATGAAACT GATACAGCAGACAATAAGCGGCAAGGCCTGAGCTACATTCCTGCACCCAAACCAAATTTG CCAGGTCATGAAGAGTCATATAATCCTTCTGTTGAATACATTCCAACACAAGAGGAGATA GATTCATATCAGCTTATGTATGAGGAGGACAGGCCAAAGTTTATTCCACGAAAATTTGAT TGTCTTAGAAGTGTACCTGCATATGAGAAGGCACTTAGGGAAGGCTTTGATCGGTGTCTA GATCTTTATCTCTGCCCTAGAACACGCAAGAAGCGTATAAACATTGATCCTGAGTCACTC AAGCCAAAGTTACCCAGTAAAAAGGATTTGAGGCCATACCCAAGAACATGTTACCTTGAG TTCAAGGGGCATAATGGTCCAGTGAAGTCTCTTTCAGTTGAAGCAACTGGGCAATGGATA GCATCTGGTTCATCTGATGGAACAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGCATT AAGGTTTGGAATGTTGGTGGTGTTGTTCACCGTATTGCCTGGAATCCTTCACCTGATAGA CACATTCTTGCTGCTGTTGTAGACCATGATCTGCTGCTTCTTAATGCTGAGGTTGGGGAT GAAGACGCTCAAATGAAGACAAAAGGGCTCCTCCAAATCGAGGAACTGGCTCAGGAAGAG GATAATGGTGATAAGAAACCAGCTGTCAAGTGGGTCAAGCATGAAAAATTTGATGGAATC ATGTTGATTCATCATAAGGCTGTGTCAACTGTAGAGTGGCATTTCAAGGGAGACTATTTC ACCACAGTTGTGCCAAGTGGTGATTCAAGAGCTGTACTGTTGCATCAGCTCTCTAAGAAG CATTCGCATCATCCTTTCCGTAAATTGCCAGGCCTTCCTATTGCAGCAGTGTTTCATCCA AGTCAAAAGATGTTCTTTGTGGCCACTAAGAAATTTGTTCAGGTTTATGATCTCCAGAAG GCACAGTTAGTCAAGAAGTTGGAGTCAGGTGTTCGTGAGATTTCCTCCATCTCGATACAT CCTGGTGGTGATAATGTTATCGTGGGCAGCAAAGATGGTAAATTGTGTTGGTTCGATACT GATCTATCCACGCGACCATACAAGACATTAAAGAACCACTCGAAGGATATCACTAATGTT ACTTTTCACCGGAAATATCCTCTTTTTGCCTCATCCTCAGAGGATTGTACGGCCTATGTA TTCCATGGAATGGTCTATTCAGATCTTAACCAAAACCCACTTATTGTACCATTGGAAATT CTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCTGGATTGCAAATTCCACCCAAGA CAGCCTTGGTTGTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAA

Peptide Sequence

PEP ID	Os07t0435400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:14534613:14541912:-1 gene:Os07g0435400 transcript:Os07t0435400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-143 description:Similar to WD40. (Os07t0435400-01);Non-protein coding transcript. (Os07t0435400-02)
Sequence	MGHSDGDHGSDLSADDSPWSEGSWSDDDDEGSLSFEDSGEGSDAESDEPDAPAVEESDSS EDEVAPRNTIGDVPLEWYKNEEHIGYDITGSKIKKRDREGRIEAYLRNADDAKNWRKIYD EYNDEEVQITKEEAKIISRLLKGKTPHTNVDPYPDYVDWFEYDGKGHPLSSAPEPKRRFV PSRWEQKKVVKLVRAIRKGWIKFDKPKEEPNFYLLWGDETDTADNKRQGLSYIPAPKPNL PGHEESYNPSVEYIPTQEEIDSYQLMYEEDRPKFIPRKFDCLRSVPAYEKALREGFDRCL DLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYPRTCYLEFKGHNGPVKSLSVEATGQWI ASGSSDGTIRVWEVETGRCIKVWNVGGVVHRIAWNPSPDRHILAAVVDHDLLLLNAEVGD EDAQMKTKGLLQIEELAQEEDNGDKKPAVKWVKHEKFDGIMLIHHKAVSTVEWHFKGDYF TTVVPSGDSRAVLLHQLSKKHSHHPFRKLPGLPIAAVFHPSQKMFFVATKKFVQVYDLQK AQLVKKLESGVREISSISIHPGGDNVIVGSKDGKLCWFDTDLSTRPYKTLKNHSKDITNV TFHRKYPLFASSSEDCTAYVFHGMVYSDLNQNPLIVPLEILRGHSSSDGRGVLDCKFHPR QPWLFTAGADSVVRLYCD

Transcript Sequence

Transcript ID	Os07t0435400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:14534613:14541912:-1 gene:Os07g0435400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-143 description:Similar to WD40. (Os07t0435400-01);Non-protein coding transcript. (Os07t0435400-02)
Sequence	AGCCGGCGGCGCGCACTCTCTCTCTCCCCCCTACTCCGCCGCGCTGGTGGCGCCGCCTCG ACCCCAACTGCGGCGGCTGTCTCCACCCCCTCCGGTTGGCAGCGCCCGCGGCCACCGCCA CTAACTACGCGCCTGCCGCCGCCGCCGCCAAGGCCTTTGACAGAATATGGGGCACAGCGA CGGCGACCACGGTAGCGACCTCTCCGCCGACGATTCCCCGTGGAGCGAGGGGAGCTGGTC CGACGACGATGACGAGGGATCGCTATCCTTCGAGGACAGCGGCGAAGGCTCCGACGCCGA GTCCGACGAACCGGATGCCCCGGCGGTGGAGGAGAGCGACTCTTCTGAGGACGAGGTGGC GCCACGGAATACGATAGGAGATGTGCCGTTGGAATGGTACAAGAACGAGGAGCACATCGG CTATGACATCACTGGTAGTAAGATCAAGAAGCGGGATAGGGAGGGCCGAATTGAGGCCTA CCTCAGGAATGCTGATGATGCTAAGAATTGGAGAAAGATCTATGACGAGTATAATGATGA AGAGGTGCAGATTACCAAGGAAGAGGCTAAGATAATTAGTAGATTGCTGAAGGGAAAGAC TCCACACACAAATGTGGATCCATATCCAGATTATGTTGATTGGTTTGAATATGATGGTAA AGGCCATCCACTTTCTAGTGCTCCGGAGCCAAAGAGGCGATTTGTACCCTCGAGGTGGGA ACAGAAGAAGGTTGTTAAACTTGTTAGAGCCATTCGTAAAGGATGGATAAAGTTTGATAA GCCAAAGGAGGAACCTAACTTTTATCTCTTGTGGGGAGATGAAACTGATACAGCAGACAA TAAGCGGCAAGGCCTGAGCTACATTCCTGCACCCAAACCAAATTTGCCAGGTCATGAAGA GTCATATAATCCTTCTGTTGAATACATTCCAACACAAGAGGAGATAGATTCATATCAGCT TATGTATGAGGAGGACAGGCCAAAGTTTATTCCACGAAAATTTGATTGTCTTAGAAGTGT ACCTGCATATGAGAAGGCACTTAGGGAAGGCTTTGATCGGTGTCTAGATCTTTATCTCTG CCCTAGAACACGCAAGAAGCGTATAAACATTGATCCTGAGTCACTCAAGCCAAAGTTACC CAGTAAAAAGGATTTGAGGCCATACCCAAGAACATGTTACCTTGAGTTCAAGGGGCATAA TGGTCCAGTGAAGTCTCTTTCAGTTGAAGCAACTGGGCAATGGATAGCATCTGGTTCATC TGATGGAACAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGCATTAAGGTTTGGAATGT TGGTGGTGTTGTTCACCGTATTGCCTGGAATCCTTCACCTGATAGACACATTCTTGCTGC TGTTGTAGACCATGATCTGCTGCTTCTTAATGCTGAGGTTGGGGATGAAGACGCTCAAAT GAAGACAAAAGGGCTCCTCCAAATCGAGGAACTGGCTCAGGAAGAGGATAATGGTGATAA GAAACCAGCTGTCAAGTGGGTCAAGCATGAAAAATTTGATGGAATCATGTTGATTCATCA TAAGGCTGTGTCAACTGTAGAGTGGCATTTCAAGGGAGACTATTTCACCACAGTTGTGCC AAGTGGTGATTCAAGAGCTGTACTGTTGCATCAGCTCTCTAAGAAGCATTCGCATCATCC TTTCCGTAAATTGCCAGGCCTTCCTATTGCAGCAGTGTTTCATCCAAGTCAAAAGATGTT CTTTGTGGCCACTAAGAAATTTGTTCAGGTTTATGATCTCCAGAAGGCACAGTTAGTCAA GAAGTTGGAGTCAGGTGTTCGTGAGATTTCCTCCATCTCGATACATCCTGGTGGTGATAA TGTTATCGTGGGCAGCAAAGATGGTAAATTGTGTTGGTTCGATACTGATCTATCCACGCG ACCATACAAGACATTAAAGAACCACTCGAAGGATATCACTAATGTTACTTTTCACCGGAA ATATCCTCTTTTTGCCTCATCCTCAGAGGATTGTACGGCCTATGTATTCCATGGAATGGT CTATTCAGATCTTAACCAAAACCCACTTATTGTACCATTGGAAATTCTTCGTGGTCATTC AAGTTCAGATGGAAGAGGAGTTCTGGATTGCAAATTCCACCCAAGACAGCCTTGGTTGTT CACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAA AAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTCGTAT ACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCC ATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTCTGT AGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGA TAAACAGATAAGGAACACCGAGCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCA CAAGCTTTTGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGGAAGCTTG AGTTCGACCC