Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0424400-04
CDS Infomation	cds chromosome:IRGSP-1.0:7:13741616:13743741:-1 gene:Os07g0424400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A3 description:Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)
Sequence	TATGATGCCCCCAAAACGAAGAAGCCTCCGTCGAGGACCTGCAACTGCTGGCCTAAATGG TGCATTTGCTGTTGCTGCTTTGGTGACAGGAAGAGCAAGAAGAAAACTACGAAACCTAAA ACAGAGAAGAAGAAAAGATCTTTCTTCAAGAGAGCAGAAAATCAATCCCCTGCATATGCA CTTGGTGAAATTGAGGAGGGTGCTCCAGGAGCTGAAAATGAAAAGGCTGGTATTGTAAAT CAACAGAAGCTGGAAAAGAAATTTGGCCAATCTTCTGTTTTTGTCGCATCCACACTTCTT GAGAATGGTGGAACCTTGAAAAGTGCGAGTCCAGCATCTCTTCTAAAGGAAGCAATTCAT GTCATAAGCTGTGGGTACGAAGATAAGACAGACTGGGGGAAAGAGATTGGCTGGATCTAC GGATCAGTTACAGAAGATATTCTAACTGGTTTTAAGATGCACTGCCATGGTTGGCGGTCA ATTTACTGCATACCTAAACTACCTGCATTCAAAGGTTCTGCACCACTCAATCTTTCTGAT CGTCTTCACCAAGTTCTTCGGTGGGCTCTTGGGTCTGTTGAAATATTCTTCAGCAACCAT TGCCCTCTTTGGTATGGATATGGTGGTGGACTAAAATGTTTGGAAAGATTTTCCTACATT AATTCCATCGTGTATCCTTTTACATCCATTCCACTCTTGGCTTACTGTACATTGCCAGCC ATCTGTTTGCTAACTGGGAAGTTTATCACTCCAGAGCTTACGAATGTTGCCAGTCTCTGG TTCATGTCACTTTTTATCTGCATTTTTGCTACTGGCATCCTGGAAATGAGATGGAGTGGT GTTGGCATTGATGATTGGTGGAGAAATGAACAATTTTGGGTCATTGGAGGGGTCTCTTCG CACCTCTTTGCTTTGTTCCAGGGACTTTTGAAGGTCATAGCTGGTATAGATACGAGTTTC ACTGTGACATCAAAAGGTGGGGACGATGAAGAGTTCTCAGAGCTATATACATTCAAATGG ACTACCTTGCTGATACCTCCAACCACTCTACTCTTATTGAACTTCATTGGGGTTGTTGCT GGTGTTTCGAATGCAATCAATAACGGGTATGAATCATGGGGACCCCTCTTCGGGAAGCTC TTCTTTGCATTTTGGGTGATCGTCCATCTTTACCCATTCCTCAAAGGTTTGGTTGGAAGG CAAAACAGGACGCCAACAATTGTTATTGTCTGGTCCATTCTTCTGGCTTCAATCTTCTCA CTCCTCTGGGTCCGGATTGATCCTTTCTTAGCAAAGAATGATGGTCCACTTCTGGAAGAG TGTGGTTTGGATTGCAACTAG

Peptide Sequence

PEP ID	Os07t0424400-04
PEP Infomation	pep chromosome:IRGSP-1.0:7:13741616:13743741:-1 gene:Os07g0424400 transcript:Os07t0424400-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A3 description:Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)
Sequence	YDAPKTKKPPSRTCNCWPKWCICCCCFGDRKSKKKTTKPKTEKKKRSFFKRAENQSPAYA LGEIEEGAPGAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIH VISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSD RLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPA ICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSS HLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVA GVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFS LLWVRIDPFLAKNDGPLLEECGLDCN

Transcript Sequence

Transcript ID	Os07t0424400-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:13741616:13743741:-1 gene:Os07g0424400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A3 description:Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)
Sequence	TTATGATGCCCCCAAAACGAAGAAGCCTCCGTCGAGGACCTGCAACTGCTGGCCTAAATG GTGCATTTGCTGTTGCTGCTTTGGTGACAGGAAGAGCAAGAAGAAAACTACGAAACCTAA AACAGAGAAGAAGAAAAGATCTTTCTTCAAGAGAGCAGAAAATCAATCCCCTGCATATGC ACTTGGTGAAATTGAGGAGGGTGCTCCAGGAGCTGAAAATGAAAAGGCTGGTATTGTAAA TCAACAGAAGCTGGAAAAGAAATTTGGCCAATCTTCTGTTTTTGTCGCATCCACACTTCT TGAGAATGGTGGAACCTTGAAAAGTGCGAGTCCAGCATCTCTTCTAAAGGAAGCAATTCA TGTCATAAGCTGTGGGTACGAAGATAAGACAGACTGGGGGAAAGAGATTGGCTGGATCTA CGGATCAGTTACAGAAGATATTCTAACTGGTTTTAAGATGCACTGCCATGGTTGGCGGTC AATTTACTGCATACCTAAACTACCTGCATTCAAAGGTTCTGCACCACTCAATCTTTCTGA TCGTCTTCACCAAGTTCTTCGGTGGGCTCTTGGGTCTGTTGAAATATTCTTCAGCAACCA TTGCCCTCTTTGGTATGGATATGGTGGTGGACTAAAATGTTTGGAAAGATTTTCCTACAT TAATTCCATCGTGTATCCTTTTACATCCATTCCACTCTTGGCTTACTGTACATTGCCAGC CATCTGTTTGCTAACTGGGAAGTTTATCACTCCAGAGCTTACGAATGTTGCCAGTCTCTG GTTCATGTCACTTTTTATCTGCATTTTTGCTACTGGCATCCTGGAAATGAGATGGAGTGG TGTTGGCATTGATGATTGGTGGAGAAATGAACAATTTTGGGTCATTGGAGGGGTCTCTTC GCACCTCTTTGCTTTGTTCCAGGGACTTTTGAAGGTCATAGCTGGTATAGATACGAGTTT CACTGTGACATCAAAAGGTGGGGACGATGAAGAGTTCTCAGAGCTATATACATTCAAATG GACTACCTTGCTGATACCTCCAACCACTCTACTCTTATTGAACTTCATTGGGGTTGTTGC TGGTGTTTCGAATGCAATCAATAACGGGTATGAATCATGGGGACCCCTCTTCGGGAAGCT CTTCTTTGCATTTTGGGTGATCGTCCATCTTTACCCATTCCTCAAAGGTTTGGTTGGAAG GCAAAACAGGACGCCAACAATTGTTATTGTCTGGTCCATTCTTCTGGCTTCAATCTTCTC ACTCCTCTGGGTCCGGATTGATCCTTTCTTAGCAAAGAATGATGGTCCACTTCTGGAAGA GTGTGGTTTGGATTGCAACTAGGGAGTTGGGAACTCCCCCATCGGTGTGTGCTGAAGGAA TACACACTTGGTTCTGTGTAGATAGAAACACGAAAGGTGATGTTTTGCTTTTGTCCCATG GTGGTAGCTCAGCCTCATATCTGCAATATTTGGGCAAACCGGAGGCTGCGGCAACCTTGT GAACTTCGGCCACCAAGTACAGCCAAACTGCGTTTGATTGTCCAGCATTATTTATTACTG CTTTGGTGGTAAATTTAATTGGGTGAGCTGAACAGAAGGTGTTGGCATTGCTGTTCATGT ACAAACTTGTGTCTCAATAAGGCAGGCAGGAATGGATCTGCTATGGAGTAGAAAGGTGAT GCACAGTATTTATGTAGTGAAACGTGTGTGGGTGCCCATTGAAGGGCTTGTTCATTCCTT GTTTCTCTTTTTTACTTATCTAGAACCAAATGGATCATTTAGTGTTAGTAATGTAGTGCA TCCAGTGTTGTAAAGGCGCCCTATTTTTGGTTGGTAATTGTAATCAATATATACTTCTGT TGTCTTG