Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0423000-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:13654341:13655841:-1 gene:Os07g0423000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochodrial transcription termination factor-related family protein. (Os07t0423000-01)
Sequence

ATGTCTCTGCGCTGCTACCACCACCACCTCAAGGTCCGCGCCCTCCTCTGCGGCTTTGGC
GGCGGCTGCTTCCCCACGCGGACGCCCCCCTCCCCCTCGCCCTGGTCTCCGCCTCTCACG
CATTTCATCAAGCACCTCCTGGGCAGTCCGGCCGCGCTCTCAGGCACCGCCACCGGCGCC
GCCTGCGAGCCCTGCTCCCTCACGCTCCACTTCCTCCGCAACACCTGCGGCCTCTCGGAG
GATGAGGCGGCCGCGGCCGCCGCGCGCGTCCGCCTGCGCTCCACCAAGAAGGCGCACGCC
ATCGTCGCCCTCTTCCGCGGCATCGGCTTCTCGGCCGCCGACATCGCCCGCCTCGTCACC
TCGAACCCGTCCTTGCTCTCTTACCGGGCCGACGCCACCCTCATGCCCAAGATCGAGTTC
TTCCGCCGCGAGCTCGGCCTCACCGACGCCGAGATCCGCCGCCTCGTCCTCGCCAACCCC
TACCGCGTCCTCCGTTACAGCCTCAAGCGCTGCATCCGCCCCAACTACCTCATCCTCAGA
GACCTCCTCGGCAGCGACAAGAACGTGACCGCTGCCGTCTTGCAGTCCACGGATCTCATC
CACGGGGACGTTCGTGGCATCCTCCTCCCCAAGATCAAGATCCTCCAGGACTACGGCGCC
ACGAACGATGTCATCGTCAAGCTGGTCACCACGCACCCCAGGGCACTCATGCATAGGGCC
TCCCGCTTCGAGGAGAGCTTGGCTGCCATGAAGGAGCTCGGGGTCAGACCTTCCTCTGGA
ATGTTCCCCTATTCCTTCGGGCTCTTTGCCAGATTGCATCCAAGGAAATGGAAGGGCAGG
ATGGACAATTTCTTGAGCTTGGGATGGACAAAGGAGCAAGTGATTGAGGCGTTTGTGAGG
CACCCGTACTGCATGTCCGTGTCGAATGACAAGGTGAAGCTCATCTGGCAGTTTCTCGCG
AAGAAGCTCAGGTGGACCACCGATTATGTCGCAAGGAGCCCGATGGTTCTCTCCTTCAGC
TACGATAAGCGAATCTTGCCAAGGTGCACGGTGCTGAACTTGTTGGCATCGAGGGGCATA
TTCAACAGGGACATCAAGACATCCCATCTGGTACTGGGGGAGAAGAAGTTTAAGGAGAAG
TATGTCACCCCTTACCAGGATGAAATTCCTGAGGTACTGGAAGCTTATTCTTCTGTGGCA
GAAAGTCGAGTCCCCGTGTATAAGTAG

Peptide Sequence

PEP ID

Os07t0423000-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:13654341:13655841:-1 gene:Os07g0423000 transcript:Os07t0423000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochodrial transcription termination factor-related family protein. (Os07t0423000-01)
Sequence

MSLRCYHHHLKVRALLCGFGGGCFPTRTPPSPSPWSPPLTHFIKHLLGSPAALSGTATGA
ACEPCSLTLHFLRNTCGLSEDEAAAAAARVRLRSTKKAHAIVALFRGIGFSAADIARLVT
SNPSLLSYRADATLMPKIEFFRRELGLTDAEIRRLVLANPYRVLRYSLKRCIRPNYLILR
DLLGSDKNVTAAVLQSTDLIHGDVRGILLPKIKILQDYGATNDVIVKLVTTHPRALMHRA
SRFEESLAAMKELGVRPSSGMFPYSFGLFARLHPRKWKGRMDNFLSLGWTKEQVIEAFVR
HPYCMSVSNDKVKLIWQFLAKKLRWTTDYVARSPMVLSFSYDKRILPRCTVLNLLASRGI
FNRDIKTSHLVLGEKKFKEKYVTPYQDEIPEVLEAYSSVAESRVPVYK

Transcript Sequence

Transcript ID

Os07t0423000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:13654341:13655841:-1 gene:Os07g0423000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochodrial transcription termination factor-related family protein. (Os07t0423000-01)
Sequence

AGGCCTGCAGCGCCGCGGTACCTGAAAACCTCTCTTCCGCCACAAGTCCACCTGCCGCCG
CCGCCGCCGCCGCCGCGGCGCCGCCCAAATGTCTCTGCGCTGCTACCACCACCACCTCAA
GGTCCGCGCCCTCCTCTGCGGCTTTGGCGGCGGCTGCTTCCCCACGCGGACGCCCCCCTC
CCCCTCGCCCTGGTCTCCGCCTCTCACGCATTTCATCAAGCACCTCCTGGGCAGTCCGGC
CGCGCTCTCAGGCACCGCCACCGGCGCCGCCTGCGAGCCCTGCTCCCTCACGCTCCACTT
CCTCCGCAACACCTGCGGCCTCTCGGAGGATGAGGCGGCCGCGGCCGCCGCGCGCGTCCG
CCTGCGCTCCACCAAGAAGGCGCACGCCATCGTCGCCCTCTTCCGCGGCATCGGCTTCTC
GGCCGCCGACATCGCCCGCCTCGTCACCTCGAACCCGTCCTTGCTCTCTTACCGGGCCGA
CGCCACCCTCATGCCCAAGATCGAGTTCTTCCGCCGCGAGCTCGGCCTCACCGACGCCGA
GATCCGCCGCCTCGTCCTCGCCAACCCCTACCGCGTCCTCCGTTACAGCCTCAAGCGCTG
CATCCGCCCCAACTACCTCATCCTCAGAGACCTCCTCGGCAGCGACAAGAACGTGACCGC
TGCCGTCTTGCAGTCCACGGATCTCATCCACGGGGACGTTCGTGGCATCCTCCTCCCCAA
GATCAAGATCCTCCAGGACTACGGCGCCACGAACGATGTCATCGTCAAGCTGGTCACCAC
GCACCCCAGGGCACTCATGCATAGGGCCTCCCGCTTCGAGGAGAGCTTGGCTGCCATGAA
GGAGCTCGGGGTCAGACCTTCCTCTGGAATGTTCCCCTATTCCTTCGGGCTCTTTGCCAG
ATTGCATCCAAGGAAATGGAAGGGCAGGATGGACAATTTCTTGAGCTTGGGATGGACAAA
GGAGCAAGTGATTGAGGCGTTTGTGAGGCACCCGTACTGCATGTCCGTGTCGAATGACAA
GGTGAAGCTCATCTGGCAGTTTCTCGCGAAGAAGCTCAGGTGGACCACCGATTATGTCGC
AAGGAGCCCGATGGTTCTCTCCTTCAGCTACGATAAGCGAATCTTGCCAAGGTGCACGGT
GCTGAACTTGTTGGCATCGAGGGGCATATTCAACAGGGACATCAAGACATCCCATCTGGT
ACTGGGGGAGAAGAAGTTTAAGGAGAAGTATGTCACCCCTTACCAGGATGAAATTCCTGA
GGTACTGGAAGCTTATTCTTCTGTGGCAGAAAGTCGAGTCCCCGTGTATAAGTAGCTGGA
GAGGATTATGCTGCGCTTCACCGTGCAACAAAGGCACTGCCTTCCCCTTGACTTTAATTA
TGTTCAATTTCATTGAATGCTTTCTTTTCTTTCTGAAATCAAGGCATGCAATGGAGCTGA
AAACAAATTGTTGTAGGATTCTTGAAATATGAATGATTGAAACTGCGAACATACTGGTTA
C