Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0419500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:13399139:13411985:1 gene:Os07g0419500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-glucose:sterol glucosyltransferase. (Os07t0419500-01)
Sequence

ATGAGAGGGGCCAGCGGCGGCGGCGAGGGATTCGTCGGCGCCTCTTCCGTTTCAAACAAT
ATTAGCCTACCAAATGAGGGTACTAGCCCTAGAGGAACAGATAATGCTGAATGTTCTGAG
ACATCTTCAGACAGGTCGAATTCGGAAAGCATAAAACCTGAAGAATGTGCAATGCCATCT
TCAATATTTGATAAGAAGATTTCCATAAAAAAGAAGCTCAGATTGTTAAGTCGAATGGCT
ATACTGAAAGATGATGGAACTGTAGAAGTTGATATCCCCACTAATGCTGAGGCTGCATCT
CTTGACCTTTCTTCAAATGATTACTGTAATGAAGCCTTTAGTGGGGAACCATTGGCATCT
TCAGATTTCCAGCACAGACCTCCTATGCAAATTGTTATGCTCATTGTTGGTACTAGAGGA
GATGTGCAGCCTTTTATAGCTATAGGAAAACGATTGCAGATCTATGGCCATCGTGTTAGA
CTGGCAACTCATGCCAACTTCAAGGATTTTGTTGTGACGGCTGGCCTGGAGTTTTATCCC
CTAGGCGGAGACCCAAAACTTCTTGCAGGATACATGGTGAAGAATAAAGGGTTCTTGCCT
GCAACTCCATCAGAAATCCCTATCCAGCGGAAGGAGATTAAAGAGATTATATTCTCCTTG
CTTCCTGCTTGCAAAGATCCCGATACTGATACTGGTGCTCCTTTCAATGTAAATGCTATA
ATAGCTAATCCTGCAGCGTACGGGCATGTGCATGTGGCTGAGGCTCTGAAGGTACCAATC
CACATAATTTTCACAATGCCATGGACGCCTACTTGTGAATTCCCTCATCCCTTCTCCCGT
GTAAAACAACCTGCAGGATATAGACTATCATACCAGATTGTTGACTCCTTTGTTTGGCTT
GGTATTCGGGATATTATAAATGATCTTCGGAAAAGGAAGTTGAAGTTAAGACCAGTTACG
TACCTAAGTAGCGCACATGCTTATTCAAATGATATTCCTCATGCATATATCTGGAGTCCT
TACCTTGTACCCAAACCAAAGGACTGGGGACCCAAAATTGACGTTGTTGGGTTTTGCTTC
CTCGATCTTGCTTCAAATTATAAACCTCCTGAACCCCTTCTCAAATGGCTTGAGAGTGGT
GAAAAGCCTATTTACATAGGTTTTGGCAGCCTTCCAATTCCAGAACCAGATAAGTTGACA
AGAATCATAGTGGAAGCACTTGAAATTACTGGACAGAGAGGTATCATTAACAAGGGTTGG
GGTGGCCTTGGAAATTTAGAGGAACCTAAGGAATTTGTATATGTAATAGATAACATTCCA
CATGACTGGCTTTTTTTGCAGTGCAAGGCTGTGGTACACCATGGTGGTGCTGGGACAACA
GCTGCCAGTCTTAAGGCTGCGTGCCCCACTACCATCGTACCATTCTTTGGAGATCAATTC
TTTTGGGGCAACATGGTGCATGCTAGAGGATTGGGAGCCCCACCTGTCCCTGTGGAGCAA
TTACAATTGCATCTACTGGTTGATGCAATTAAATTTATGATGGATCCAAAGGTGAAGGAG
AGAGCTGTTGAGCTAGCAAAAGCAATTGAATCGGAAGATGGCGTTGACGGGGCAGTGAAA
GCATTTTTGAAACATCTCCCACAGCCCAGGAGCCTTGAGAAGCCGCAGCCTGCACCGCCA
TCGTCAACCTTCATGCAGCCCTTTCTCCTCCCCGTAAAGAGATGTTTTGGCATCGCCACA
TAG

Peptide Sequence

PEP ID

Os07t0419500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:13399139:13411985:1 gene:Os07g0419500 transcript:Os07t0419500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-glucose:sterol glucosyltransferase. (Os07t0419500-01)
Sequence

MRGASGGGEGFVGASSVSNNISLPNEGTSPRGTDNAECSETSSDRSNSESIKPEECAMPS
SIFDKKISIKKKLRLLSRMAILKDDGTVEVDIPTNAEAASLDLSSNDYCNEAFSGEPLAS
SDFQHRPPMQIVMLIVGTRGDVQPFIAIGKRLQIYGHRVRLATHANFKDFVVTAGLEFYP
LGGDPKLLAGYMVKNKGFLPATPSEIPIQRKEIKEIIFSLLPACKDPDTDTGAPFNVNAI
IANPAAYGHVHVAEALKVPIHIIFTMPWTPTCEFPHPFSRVKQPAGYRLSYQIVDSFVWL
GIRDIINDLRKRKLKLRPVTYLSSAHAYSNDIPHAYIWSPYLVPKPKDWGPKIDVVGFCF
LDLASNYKPPEPLLKWLESGEKPIYIGFGSLPIPEPDKLTRIIVEALEITGQRGIINKGW
GGLGNLEEPKEFVYVIDNIPHDWLFLQCKAVVHHGGAGTTAASLKAACPTTIVPFFGDQF
FWGNMVHARGLGAPPVPVEQLQLHLLVDAIKFMMDPKVKERAVELAKAIESEDGVDGAVK
AFLKHLPQPRSLEKPQPAPPSSTFMQPFLLPVKRCFGIAT

Transcript Sequence

Transcript ID

Os07t0419500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:13399139:13411985:1 gene:Os07g0419500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-glucose:sterol glucosyltransferase. (Os07t0419500-01)
Sequence

CTCCTCCCCACTTCCCTTCCCGCACCGTGGTCTCCTCCTCCTCCTCCTCTCCACCCGCAT
CCGTGGCTCCGGTTGCGCTGCTCGGGAGGGAGGGAGGGTTACTAGGAGGTTGCTGGAGCG
GCCGATGAGAGGGGCCAGCGGCGGCGGCGAGGGATTCGTCGGCGCCTCTTCCGTTTCAAA
CAATATTAGCCTACCAAATGAGGGTACTAGCCCTAGAGGAACAGATAATGCTGAATGTTC
TGAGACATCTTCAGACAGGTCGAATTCGGAAAGCATAAAACCTGAAGAATGTGCAATGCC
ATCTTCAATATTTGATAAGAAGATTTCCATAAAAAAGAAGCTCAGATTGTTAAGTCGAAT
GGCTATACTGAAAGATGATGGAACTGTAGAAGTTGATATCCCCACTAATGCTGAGGCTGC
ATCTCTTGACCTTTCTTCAAATGATTACTGTAATGAAGCCTTTAGTGGGGAACCATTGGC
ATCTTCAGATTTCCAGCACAGACCTCCTATGCAAATTGTTATGCTCATTGTTGGTACTAG
AGGAGATGTGCAGCCTTTTATAGCTATAGGAAAACGATTGCAGATCTATGGCCATCGTGT
TAGACTGGCAACTCATGCCAACTTCAAGGATTTTGTTGTGACGGCTGGCCTGGAGTTTTA
TCCCCTAGGCGGAGACCCAAAACTTCTTGCAGGATACATGGTGAAGAATAAAGGGTTCTT
GCCTGCAACTCCATCAGAAATCCCTATCCAGCGGAAGGAGATTAAAGAGATTATATTCTC
CTTGCTTCCTGCTTGCAAAGATCCCGATACTGATACTGGTGCTCCTTTCAATGTAAATGC
TATAATAGCTAATCCTGCAGCGTACGGGCATGTGCATGTGGCTGAGGCTCTGAAGGTACC
AATCCACATAATTTTCACAATGCCATGGACGCCTACTTGTGAATTCCCTCATCCCTTCTC
CCGTGTAAAACAACCTGCAGGATATAGACTATCATACCAGATTGTTGACTCCTTTGTTTG
GCTTGGTATTCGGGATATTATAAATGATCTTCGGAAAAGGAAGTTGAAGTTAAGACCAGT
TACGTACCTAAGTAGCGCACATGCTTATTCAAATGATATTCCTCATGCATATATCTGGAG
TCCTTACCTTGTACCCAAACCAAAGGACTGGGGACCCAAAATTGACGTTGTTGGGTTTTG
CTTCCTCGATCTTGCTTCAAATTATAAACCTCCTGAACCCCTTCTCAAATGGCTTGAGAG
TGGTGAAAAGCCTATTTACATAGGTTTTGGCAGCCTTCCAATTCCAGAACCAGATAAGTT
GACAAGAATCATAGTGGAAGCACTTGAAATTACTGGACAGAGAGGTATCATTAACAAGGG
TTGGGGTGGCCTTGGAAATTTAGAGGAACCTAAGGAATTTGTATATGTAATAGATAACAT
TCCACATGACTGGCTTTTTTTGCAGTGCAAGGCTGTGGTACACCATGGTGGTGCTGGGAC
AACAGCTGCCAGTCTTAAGGCTGCGTGCCCCACTACCATCGTACCATTCTTTGGAGATCA
ATTCTTTTGGGGCAACATGGTGCATGCTAGAGGATTGGGAGCCCCACCTGTCCCTGTGGA
GCAATTACAATTGCATCTACTGGTTGATGCAATTAAATTTATGATGGATCCAAAGGTGAA
GGAGAGAGCTGTTGAGCTAGCAAAAGCAATTGAATCGGAAGATGGCGTTGACGGGGCAGT
GAAAGCATTTTTGAAACATCTCCCACAGCCCAGGAGCCTTGAGAAGCCGCAGCCTGCACC
GCCATCGTCAACCTTCATGCAGCCCTTTCTCCTCCCCGTAAAGAGATGTTTTGGCATCGC
CACATAGTCCGTTGCTCTCAAGCAATCGTGTTAATATTTTGGCAACACAACCAACAACCA
TGTTAAAAGAGAAATGCTCTCCTATAGTTTTTGTTCGTCACAGTATAGAATGAGCGGTCT
CCTGCAGTTTTCTTCAAACGTGGAGAGATTGTTCTTACCTTAATTTAACACCTGTTCAGC
TGTTATAGCTTGATTCATGATTGGTTTGTATAGCAGCGGTAACGGGCTCGTTTGTTTAGC
CTTAATTGTACAGTTGGCAGTCACAAAGAATGTTGCTTG