Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0418000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:13288516:13293337:-1 gene:Os07g0418000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0418000-01);HAD-like domain domain containing protein. (Os07t0418000-02)
Sequence	ATGGGGGGCGACCTGTACGCGCTCGACTTCGACGGCGTCCTCTGCGACAGCTGCGGCGAG AGCTCCCTCTCCGCCGTCAAGGCTGCGAAGGTGAGGTGGCCATGGGTGTTTGAGCAGGTC GACGCTGCCATGGAGGAGTGGATCGTGGAGCAAATGTATACCCTTCGCCCAGTGGTTGAA ACAGGATACGAGAATCTGTTGCTTGTCAGGTTGCTTATTGAGATTCGGATACCCTCTGCC CGGAGATCATCGGTTGCAGATGGGCTTAGCATCCAAGAAATACTGGAGAACTGGTTAAAA CTGAAGCCCACAATTATGAGTGAATGGAATGAAGATAGGGACTCTCTAGTTGATCTCTTT GGCAGCATAAGGGATGACTGGATTGAAAATGACTTGTCTGGTTGGATAGGTGCTAACAGA TTTTATCCTGGAACAGCCGATGCATTAAAATTTTCAAGTTCAGAAGTCTACATAGTCACT ACAAAACAGGGCCGATTTGCTGAAGCACTATTAAAAGAATTAGCGGGAATAGAATTTCCC TCTGAAAGGATATATGGGCTTGGCACTGGGTTGGTGCAGTATTTTTTTTATTTTTTATTT TCACCTGTTAATCATTTTATTGAATCCGTGAGTTTATGCTCCAGTCCAAAGGTAAAAGTT CTCCAGCAACTGCAGCAAATGCCACAGCATCAAGGCCTGACACTTCACTCCTGTGCTTGC GCTGGAGAGCTGGCCACTTCCCCAGTCCCCACTGCTGCTGACCTCCGACTGATCCTGCAC AAGCTTCACTCTGTATGTGAGCTTCTGCGGATGGCGATGGAAGGGAACTATGTGGCGGCA ATGGGGATGCGAAGGCTGGAGAACTCCATGACCTTGATGCCTTGA

Peptide Sequence

PEP ID	Os07t0418000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:13288516:13293337:-1 gene:Os07g0418000 transcript:Os07t0418000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0418000-01);HAD-like domain domain containing protein. (Os07t0418000-02)
Sequence	MGGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPWVFEQVDAAMEEWIVEQMYTLRPVVE TGYENLLLVRLLIEIRIPSARRSSVADGLSIQEILENWLKLKPTIMSEWNEDRDSLVDLF GSIRDDWIENDLSGWIGANRFYPGTADALKFSSSEVYIVTTKQGRFAEALLKELAGIEFP SERIYGLGTGLVQYFFYFLFSPVNHFIESVSLCSSPKVKVLQQLQQMPQHQGLTLHSCAC AGELATSPVPTAADLRLILHKLHSVCELLRMAMEGNYVAAMGMRRLENSMTLMP

Transcript Sequence

Transcript ID	Os07t0418000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:13288516:13293337:-1 gene:Os07g0418000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0418000-01);HAD-like domain domain containing protein. (Os07t0418000-02)
Sequence	AATCAGAAGGCCAGACCACCCCCAAAACCTCCTCGTTGGCCGTCCAGTGCGGCGGAGAGA GAGAGGGAGGGAGGAAGGAGGCCGCCGCGCGATGGGGGGCGACCTGTACGCGCTCGACTT CGACGGCGTCCTCTGCGACAGCTGCGGCGAGAGCTCCCTCTCCGCCGTCAAGGCTGCGAA GGTGAGGTGGCCATGGGTGTTTGAGCAGGTCGACGCTGCCATGGAGGAGTGGATCGTGGA GCAAATGTATACCCTTCGCCCAGTGGTTGAAACAGGATACGAGAATCTGTTGCTTGTCAG GTTGCTTATTGAGATTCGGATACCCTCTGCCCGGAGATCATCGGTTGCAGATGGGCTTAG CATCCAAGAAATACTGGAGAACTGGTTAAAACTGAAGCCCACAATTATGAGTGAATGGAA TGAAGATAGGGACTCTCTAGTTGATCTCTTTGGCAGCATAAGGGATGACTGGATTGAAAA TGACTTGTCTGGTTGGATAGGTGCTAACAGATTTTATCCTGGAACAGCCGATGCATTAAA ATTTTCAAGTTCAGAAGTCTACATAGTCACTACAAAACAGGGCCGATTTGCTGAAGCACT ATTAAAAGAATTAGCGGGAATAGAATTTCCCTCTGAAAGGATATATGGGCTTGGCACTGG GTTGGTGCAGTATTTTTTTTATTTTTTATTTTCACCTGTTAATCATTTTATTGAATCCGT GAGTTTATGCTCCAGTCCAAAGGTAAAAGTTCTCCAGCAACTGCAGCAAATGCCACAGCA TCAAGGCCTGACACTTCACTCCTGTGCTTGCGCTGGAGAGCTGGCCACTTCCCCAGTCCC CACTGCTGCTGACCTCCGACTGATCCTGCACAAGCTTCACTCTGTATGTGAGCTTCTGCG GATGGCGATGGAAGGGAACTATGTGGCGGCAATGGGGATGCGAAGGCTGGAGAACTCCAT GACCTTGATGCCTTGATGGTAAGCGCACTGCTGGACAGGATGAAGGCTGTGAGCTTGGAG GCGGAGGAGCTGTTGCTGGTGCCTCTAGTGTTGATGAGGAGGTTAGGCCATTGGGTTTCA CCAGGTAGGAATGGACGGGCACATGAGGCCCTATGTGGGTCTTGGTGAGCAATAATTGAG CTGGCGTCGGCTCAGCTCAGGCTCTGATGGTGTTGATCAAGCTCCACTGCAACCACCGGA CAGCAATGGTCCTGCTTCGCTAATCGTCACCTCTTCTTTCTAGACCGAGCTCCAAGTAAC TTTCTTCCCCTTGGCTTGAGCTCCACCTTGGTCAGCCAGGTTGGAAGCAGTCAAGCACAT GGAAGCCAGAGGTCCACAGTGCCAGCCCAATGGCTGTGGGTAAGCCAACAAGAGGAGGTT CAGTGCTGGAGGAAGGAGAAGAGTAAACTTGATATTTTGCTAGGGTAAATGTTATTAGTT AATGAAAGGATTTGCACCAAATTATGTGGCAAAAGAGCAAAGCCGATGAAGTGTGTGGCA AATATAAGTACGCCACTGACCTTTGTGGCAAAGGAGCAAATTTCTCAAAAGAACGATGTT CCCTTGTCAGATGACAATAACTTTGTAAATCATATTTTGAACTATTTAGATATATTGTTT ACAAATGTATAACATGGAC