Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0412100-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:12916973:12921186:-1 gene:Os07g0412100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRANULE BOUND STARCH SYNTHASE II description:Similar to Granule-bound starch synthase Ib, chloroplast precursor (EC 2.4.1.21) (Fragment). (Os07t0412100-01);Granule-bound starch synthase 2, Starch biosynthesis (Os07t0412100-02)
Sequence	ATGGCTAGAACAATGGGTTCAACACCTACCTACTGCTCTTACCAAACAAATGGTGTTGGC GCTTTAAAGCAATCACCTCATATGCAATTCCAACAATCGTACAACTATGGAGTTAGGTTC CTAAAGAGGGATACCCTTTCTGTGCGGATTAACAAACATATGGCCAAAAGAATAGCAACA AGCACTGGAATTTGCACTAAGCCTAGGAGGTCTCACATGCCTATAGTATGCTCTGCTGGA ATGACAATAATTTTTATTGCAACTGAATGTCACCCATGGTGCAAAACTGGAGGCCTCGGT GATGTTCTAGGGGGACTGCCCCCTGCTCTTGCTGCAATGGGACATCGTGTCATGACAATA GTTCCTCGTTATGATCAATACAAAGATGCATGGGATACAAATGTCCTTGTCGAGGTCAAT ATTGGTGACAGGACAGAAACAGTGCGCTTCTTCCACTGCTATAAAAGGGGAGTTGACCGT GTTTTTGTTGATCATCCTATGTTTCTTGAGAAGGTATGGGGCAAGACTGGACCAAAATTA TACGGTCCTACCACTGGAGATGACTACCGGGACAACCAGTTGCGGTTCTGCCTTTTATGC CTCGCTGCTTTGGAGGCTCCAAGGGTTCTCAATCTCAACAATTCTGAATATTTCTCGGGA CCATATGGTGAAAATGTTGTCTTCGTTGCAAATGACTGGCACACTGGAGTCCTGCCATGC TATCTCAAGAGCATCTATCAGGCAAAAGGAATGTATGTGAATGCTAAGGTTGCTTTCTGC ATTCACAATATTGCCTACCAGGGTAGATTTGCCAGAGAAGACTTTGAACTTCTTAATCTA CCGGACAGTTTCCTGCCTTCATTTGATTTTATTGATGGGCATTTTAAACCTGTAGTAGGT AGAAAGATTAACTGGATGAAGGCAGGGATCACTGAATGTGATCTGGTTATGACGGTTAGT CCACATTATGTCAAAGAACTCGCTTCTGGCCCAGATAAAGGTGTTGAATTGGATGGCATC CTTCGCACAAAGCCCCTTGAAACTGGAATTGTCAATGGCATGGATGTTTATGAATGGAAT CCAGCAACAGATCAGTACATCAGCGTGAAATACGATGCAACAACGGTAACTGAAGCAAGG GCACTCAATAAGGAAATGCTACAAGCTGAAGTTGGGTTGCCTGTGGACTCGAGCATTCCT TTAATAGTTTTTGTTGGTCGTCTTGAAGAGCAGAAAGGGTCAGACATACTAATTGCAGCC ATTCCAGAGTTCGTGGAGGGGAATGTCCAGATAATTGTTCTTGGTACAGGGAAGAAGAAA ATGGAGGAGGAACTGATACTGCTCGAAGTTAAATATCCAAACAACGCTAGAGGGATAGCA AAATTTAATGTTCCTTTAGCGCATATGATGTTTGCTGGGGCTGATTTTATAATTGTTCCT AGTAGGTTTGAGCCATGTGGTCTCATCCAATTGCAAGGGATGAGATATGGAGTGGTTCCC ATCTGCTCATCTACTGGAGGACTTGTCGACACGGTTAAGGAGGGCGTGACCGGATTCCAC ATGGGTTTGTTCAATGTCGAGTGCGAAACTGTTGATCCAGTGGACGTCACAGCGGTTGCT TCAACTGTCAAACGGGCTCTGAAGCAGTACAACACACCGGCATTCCAAGAAATGGTTCAG AACTGCATGGCTCAAGACCTATCTTGGAAGGGACCTGCAAAGAAGTGGGAGGAGGTTCTT CTTGGGTTGGGCGTTGAGGGGAGCCAGCCAGGCATCGAGGGTGAGGAGCTGGCGCCACTT GCCAAGGAAAACGTGGCCACTCCCTGA

Peptide Sequence

PEP ID	Os07t0412100-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:12916973:12921186:-1 gene:Os07g0412100 transcript:Os07t0412100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRANULE BOUND STARCH SYNTHASE II description:Similar to Granule-bound starch synthase Ib, chloroplast precursor (EC 2.4.1.21) (Fragment). (Os07t0412100-01);Granule-bound starch synthase 2, Starch biosynthesis (Os07t0412100-02)
Sequence	MARTMGSTPTYCSYQTNGVGALKQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIAT STGICTKPRRSHMPIVCSAGMTIIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTI VPRYDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKL YGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPC YLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWN PATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAA IPEFVEGNVQIIVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVP SRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVA STVKRALKQYNTPAFQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPL AKENVATP

Transcript Sequence

Transcript ID	Os07t0412100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:12916973:12921186:-1 gene:Os07g0412100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRANULE BOUND STARCH SYNTHASE II description:Similar to Granule-bound starch synthase Ib, chloroplast precursor (EC 2.4.1.21) (Fragment). (Os07t0412100-01);Granule-bound starch synthase 2, Starch biosynthesis (Os07t0412100-02)
Sequence	AGAATTATTTCTAGAGCAGAACTTCTAACCACCATTTGGCATTTTTGTAGGTGTCACTGA ATGGCTAGAACAATGGGTTCAACACCTACCTACTGCTCTTACCAAACAAATGGTGTTGGC GCTTTAAAGCAATCACCTCATATGCAATTCCAACAATCGTACAACTATGGAGTTAGGTTC CTAAAGAGGGATACCCTTTCTGTGCGGATTAACAAACATATGGCCAAAAGAATAGCAACA AGCACTGGAATTTGCACTAAGCCTAGGAGGTCTCACATGCCTATAGTATGCTCTGCTGGA ATGACAATAATTTTTATTGCAACTGAATGTCACCCATGGTGCAAAACTGGAGGCCTCGGT GATGTTCTAGGGGGACTGCCCCCTGCTCTTGCTGCAATGGGACATCGTGTCATGACAATA GTTCCTCGTTATGATCAATACAAAGATGCATGGGATACAAATGTCCTTGTCGAGGTCAAT ATTGGTGACAGGACAGAAACAGTGCGCTTCTTCCACTGCTATAAAAGGGGAGTTGACCGT GTTTTTGTTGATCATCCTATGTTTCTTGAGAAGGTATGGGGCAAGACTGGACCAAAATTA TACGGTCCTACCACTGGAGATGACTACCGGGACAACCAGTTGCGGTTCTGCCTTTTATGC CTCGCTGCTTTGGAGGCTCCAAGGGTTCTCAATCTCAACAATTCTGAATATTTCTCGGGA CCATATGGTGAAAATGTTGTCTTCGTTGCAAATGACTGGCACACTGGAGTCCTGCCATGC TATCTCAAGAGCATCTATCAGGCAAAAGGAATGTATGTGAATGCTAAGGTTGCTTTCTGC ATTCACAATATTGCCTACCAGGGTAGATTTGCCAGAGAAGACTTTGAACTTCTTAATCTA CCGGACAGTTTCCTGCCTTCATTTGATTTTATTGATGGGCATTTTAAACCTGTAGTAGGT AGAAAGATTAACTGGATGAAGGCAGGGATCACTGAATGTGATCTGGTTATGACGGTTAGT CCACATTATGTCAAAGAACTCGCTTCTGGCCCAGATAAAGGTGTTGAATTGGATGGCATC CTTCGCACAAAGCCCCTTGAAACTGGAATTGTCAATGGCATGGATGTTTATGAATGGAAT CCAGCAACAGATCAGTACATCAGCGTGAAATACGATGCAACAACGGTAACTGAAGCAAGG GCACTCAATAAGGAAATGCTACAAGCTGAAGTTGGGTTGCCTGTGGACTCGAGCATTCCT TTAATAGTTTTTGTTGGTCGTCTTGAAGAGCAGAAAGGGTCAGACATACTAATTGCAGCC ATTCCAGAGTTCGTGGAGGGGAATGTCCAGATAATTGTTCTTGGTACAGGGAAGAAGAAA ATGGAGGAGGAACTGATACTGCTCGAAGTTAAATATCCAAACAACGCTAGAGGGATAGCA AAATTTAATGTTCCTTTAGCGCATATGATGTTTGCTGGGGCTGATTTTATAATTGTTCCT AGTAGGTTTGAGCCATGTGGTCTCATCCAATTGCAAGGGATGAGATATGGAGTGGTTCCC ATCTGCTCATCTACTGGAGGACTTGTCGACACGGTTAAGGAGGGCGTGACCGGATTCCAC ATGGGTTTGTTCAATGTCGAGTGCGAAACTGTTGATCCAGTGGACGTCACAGCGGTTGCT TCAACTGTCAAACGGGCTCTGAAGCAGTACAACACACCGGCATTCCAAGAAATGGTTCAG AACTGCATGGCTCAAGACCTATCTTGGAAGGGACCTGCAAAGAAGTGGGAGGAGGTTCTT CTTGGGTTGGGCGTTGAGGGGAGCCAGCCAGGCATCGAGGGTGAGGAGCTGGCGCCACTT GCCAAGGAAAACGTGGCCACTCCCTGAAATTCTCCATGACGGTGCCTAGCTTGCTGGCTT GTTTAGGTGACAGGCAGCCTGATAGGATCCCATGGACTTCTGAGCTCGCCACCGGCAAAG CCACTATTTGTATCCCTGCAGGCTTCTGCCATTTCTCTCGTCTACTTCACGTGTAATATA ATCGCAGATGTTACTTAGAGATGATGGGCCAGATGGCATGCATTTGCCTGTT