Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0408700-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:12716632:12722874:-1 gene:Os07g0408700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPERMIDINE SYNTHASE 1 description:Similar to Spermidine synthase 2 (EC 2.5.1.16) (Putrescine aminopropyltransferase 2) (SPDSY 2). (Os07t0408700-02)
Sequence	ATGGAGGCCGAGGCGGCGGCGAAGAGGGCGCGGGAGAGCGGTGACGCGGCGGCGGCCGGT GCCGGCGAGCAGGCGGGTATCTCTGCCGTCATCCCTGGATGGTTCTCCGAGATTAGCCCC ATGTGGCCTGGTGAGGCACACTCATTGAAGGTCGAAAAGGTACTATTCCAAGGAAAGTCG GACTACCAAAATGTGATGGTGTTTCAGTCCTCCACGTACGGCAAGGTGCTTGTGCTGGAT GGAGTGATTCAGGTCACTGAGAGGGATGAGTGTGCTTACCAAGAGATGATTACCCACCTC CCCCTTTGCTCTATCAAAGATCCCAAGAAGGTGTTAGTTATTGGAGGTGGAGATGGTGGT GTTTTGCGTGAAGTTTCACGACATTCCTCGGTGGAGCAAATTGACATATGTGAAATTGAT AAGATGGTGGTAGATGTCTCCAAACAATTTTTTCCTCATCTGGCTGTTGGATTTGAAGAC CCCCGTGTGTCATTACACATTGGAGATGGCGTGGCCTTTTTGAAAAATGCTCCAGAGGGT ACTTATGATGCAGTTATTGTGGATTCCTCTGATCCAATAGGACCGGCTCAAGAGCTTTTC GAGAAGCCTTTCTTCCAGTCAGTTGCCAGAGCTTTGCGTCCTGGTGGTGTTGTATGTACC CAGGCAGAGAGCATATGGTTGCATATGCATATTATTGAAGATATTGTAGCTAATTGTCGC CAAGTTTTTAAAGGCTCAGTGAATTATGCTTGGACAACAGTACCAACATACCCTAGTGGT GTTATTGGTTTTATGCTTTGCTCCACCGAGGGGCCTACTGTTGATTTCCAGCATCCTATT TTTAACATTGAGGATAATGAGTTCTCAACAAAATCGAAAGGACCACTTAAGTTCTACAAT TCCGAGATCCACTCAGCATCATTTTGTTTGCCGTCTTTTGCGAAGAGAGTCATTGGATCC AAGGCCAACTAG

Peptide Sequence

PEP ID	Os07t0408700-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:12716632:12722874:-1 gene:Os07g0408700 transcript:Os07t0408700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPERMIDINE SYNTHASE 1 description:Similar to Spermidine synthase 2 (EC 2.5.1.16) (Putrescine aminopropyltransferase 2) (SPDSY 2). (Os07t0408700-02)
Sequence	MEAEAAAKRARESGDAAAAGAGEQAGISAVIPGWFSEISPMWPGEAHSLKVEKVLFQGKS DYQNVMVFQSSTYGKVLVLDGVIQVTERDECAYQEMITHLPLCSIKDPKKVLVIGGGDGG VLREVSRHSSVEQIDICEIDKMVVDVSKQFFPHLAVGFEDPRVSLHIGDGVAFLKNAPEG TYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVVCTQAESIWLHMHIIEDIVANCR QVFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYN SEIHSASFCLPSFAKRVIGSKAN

Transcript Sequence

Transcript ID	Os07t0408700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:12716632:12722874:-1 gene:Os07g0408700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPERMIDINE SYNTHASE 1 description:Similar to Spermidine synthase 2 (EC 2.5.1.16) (Putrescine aminopropyltransferase 2) (SPDSY 2). (Os07t0408700-02)
Sequence	ACAGAAGAGAGACAGGGGAGAAAACCCTAATCTCAAGGCCGCGGCTGTGAGCGCTCCTCC CGTCTCTCCCCCAACCCGCCGCCAGCCACCGAGCTCGCCACCGTCTCCGTTGCCTCGCCG TGCTCTAGGTTCTCGGATGGAGGCCGAGGCGGCGGCGAAGAGGGCGCGGGAGAGCGGTGA CGCGGCGGCGGCCGGTGCCGGCGAGCAGGCGGGTATCTCTGCCGTCATCCCTGGATGGTT CTCCGAGATTAGCCCCATGTGGCCTGGTGAGGCACACTCATTGAAGGTCGAAAAGGTACT ATTCCAAGGAAAGTCGGACTACCAAAATGTGATGGTGTTTCAGTCCTCCACGTACGGCAA GGTGCTTGTGCTGGATGGAGTGATTCAGGTCACTGAGAGGGATGAGTGTGCTTACCAAGA GATGATTACCCACCTCCCCCTTTGCTCTATCAAAGATCCCAAGAAGGTGTTAGTTATTGG AGGTGGAGATGGTGGTGTTTTGCGTGAAGTTTCACGACATTCCTCGGTGGAGCAAATTGA CATATGTGAAATTGATAAGATGGTGGTAGATGTCTCCAAACAATTTTTTCCTCATCTGGC TGTTGGATTTGAAGACCCCCGTGTGTCATTACACATTGGAGATGGCGTGGCCTTTTTGAA AAATGCTCCAGAGGGTACTTATGATGCAGTTATTGTGGATTCCTCTGATCCAATAGGACC GGCTCAAGAGCTTTTCGAGAAGCCTTTCTTCCAGTCAGTTGCCAGAGCTTTGCGTCCTGG TGGTGTTGTATGTACCCAGGCAGAGAGCATATGGTTGCATATGCATATTATTGAAGATAT TGTAGCTAATTGTCGCCAAGTTTTTAAAGGCTCAGTGAATTATGCTTGGACAACAGTACC AACATACCCTAGTGGTGTTATTGGTTTTATGCTTTGCTCCACCGAGGGGCCTACTGTTGA TTTCCAGCATCCTATTTTTAACATTGAGGATAATGAGTTCTCAACAAAATCGAAAGGACC ACTTAAGTTCTACAATTCCGAGATCCACTCAGCATCATTTTGTTTGCCGTCTTTTGCGAA GAGAGTCATTGGATCCAAGGCCAACTAGATCAAAGATCACTGAGCCCAAGGCCAACTGGA CTGGAATCCCTCCGACAAGAGATTTGGTTGTAGCAGAAAGAGCAATGACCCCTTTTTTCC CATTTAAATAAAAATTGGAGATGTAAACGGTTATCCAAGTGCTTTTGAATTTTGTCTCAG TATGAGAACGTTTTGTATTTGGTAACTGTTTTCCCGCATCTCCCTTACCATTTACCAAAA TGAGTATTGCTGTAGTTTTCATCTG