Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0406800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:12574580:12579665:-1 gene:Os07g0406800 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA primase, large subunit, eukaryotic domain containing protein. (Os07t0406800-01);Similar to predicted protein. (Os07t0406800-02)
Sequence	ATGGAGATCGTGAGATCCCACCGGCAGATCGCGGCGGAGGCGGCGGCCGGCGTAGGATGT GGCGGCGGGGCGGGAGGCCTGCCAACCTACCGGGTGGCGCCGCAGCTGGAGGTGCGGTTG GAAGAGTTTGAGCTCTTCGCCATCGACCGCCTCCGAGTATTGAAGGGGATCGCCGACGGG CTCTCGCGAGGGAAGAGACCGGAGGAAATGGAGAAATTGGTCAAGGAATTGTGGAAAGCC CATATGAGGCACCAGGATCCTACAGAGACTTTGAACAAGGACATAATATCTCACTTTGTT CTCCGTCTTGTCTACTGCAGAACGGAGGAGCTGCGGAAGTGGTTTCTCTCCATGGAGACT ACGCTTTTTCGCTATCGCTTTCGGCTCGAGAGTCCTGAATCACAGAGGATGCTTATGAGT GAGTTTCGACTTCCATACAAAGCATTGCCACACTCGGAATTTGAGGCTGTCAAAGACAAG TTGAGCCAAGTTGCACGCACCATTGGTCAATCTGCAGCTGTTGAATCTGTGTTCTTCAAG GTGCCTTTTGAAGAAGTTCCAGATCTTGTTGCCAGCCGCCGAGTATTTCTTTCAAAAGGA TATGCTTATGTTGCGATGAGTCAGGTTGTTTCGCTTGTGGTTACCCAATTCCGCTGCAAT ATCTCGAAGGCACTTGTTTTAACAAATAGAAAATGGACGGCCACCATTAAGGAACAAGAA AAGGATAGGTTGACTCCTATTGTCGAAGCATTGAGTAATGCATATTTTGGACCTGATTAC TCTCAGCCAAAGGATGCTGTTGAGATTTCTCTGAAGGATATTGACCAACTGGCTAAAACT TCTTTCCCTCTTTGTATGCGCCACATGCTAGAGAAGTTGAGAGAAAACCATCATCTGAAG CATGGGGGCAGAATGCAGTTTGGTCTTTTCCTTAAGGGAGCTGGACTAAAGTTGGAAGAT GCTCTAGCATTTTGGAGGGCAGAGTTTTCTCAGAAGGTTGGCTCTGAGCGATTTGACAAG GAATATGCCTACAGTATCAGGCATAATTATGGAAAGGAAGGAAAACGAACAGATTACACT CCGTATTCATGTCAAAAGATTATCTCTGCAACACCTGGTGTTGGTGATCACCATGGTTGC CCTTATCGACATTTTGGTGAAGACAACTTGAGAGCAGCTCTCAATAAAATGGGAATCAGT GGTCATCCATTAGAAGAGATAATGGATAAAGTGAAGAACAGGCACTACCAGCTAGCTTGC ACGATGACTTTTGAGGCAGAACATGGTGTCTCATGTGATACTGGAATCAATCATCCTAAT CAGTATTTCAGTGAAAGCCAGAAAGTCTTGAAAGCAAAGAATCAAGCAGTGCAGAGCCAA GGAACAACCTAA

Peptide Sequence

PEP ID	Os07t0406800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:12574580:12579665:-1 gene:Os07g0406800 transcript:Os07t0406800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA primase, large subunit, eukaryotic domain containing protein. (Os07t0406800-01);Similar to predicted protein. (Os07t0406800-02)
Sequence	MEIVRSHRQIAAEAAAGVGCGGGAGGLPTYRVAPQLEVRLEEFELFAIDRLRVLKGIADG LSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLRLVYCRTEELRKWFLSMET TLFRYRFRLESPESQRMLMSEFRLPYKALPHSEFEAVKDKLSQVARTIGQSAAVESVFFK VPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQE KDRLTPIVEALSNAYFGPDYSQPKDAVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHLK HGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYT PYSCQKIISATPGVGDHHGCPYRHFGEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLAC TMTFEAEHGVSCDTGINHPNQYFSESQKVLKAKNQAVQSQGTT

Transcript Sequence

Transcript ID	Os07t0406800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:12574580:12579665:-1 gene:Os07g0406800 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA primase, large subunit, eukaryotic domain containing protein. (Os07t0406800-01);Similar to predicted protein. (Os07t0406800-02)
Sequence	ACAAACGCGCCGACGGAGAGACGGGAGGGCAACGGGAGGGCTTAGCGCGTCGCTCCCAAC GGTGATTCGAGCCAAGACCTAGCCGCCGCCATGGAGATCGTGAGATCCCACCGGCAGATC GCGGCGGAGGCGGCGGCCGGCGTAGGATGTGGCGGCGGGGCGGGAGGCCTGCCAACCTAC CGGGTGGCGCCGCAGCTGGAGGTGCGGTTGGAAGAGTTTGAGCTCTTCGCCATCGACCGC CTCCGAGTATTGAAGGGGATCGCCGACGGGCTCTCGCGAGGGAAGAGACCGGAGGAAATG GAGAAATTGGTCAAGGAATTGTGGAAAGCCCATATGAGGCACCAGGATCCTACAGAGACT TTGAACAAGGACATAATATCTCACTTTGTTCTCCGTCTTGTCTACTGCAGAACGGAGGAG CTGCGGAAGTGGTTTCTCTCCATGGAGACTACGCTTTTTCGCTATCGCTTTCGGCTCGAG AGTCCTGAATCACAGAGGATGCTTATGAGTGAGTTTCGACTTCCATACAAAGCATTGCCA CACTCGGAATTTGAGGCTGTCAAAGACAAGTTGAGCCAAGTTGCACGCACCATTGGTCAA TCTGCAGCTGTTGAATCTGTGTTCTTCAAGGTGCCTTTTGAAGAAGTTCCAGATCTTGTT GCCAGCCGCCGAGTATTTCTTTCAAAAGGATATGCTTATGTTGCGATGAGTCAGGTTGTT TCGCTTGTGGTTACCCAATTCCGCTGCAATATCTCGAAGGCACTTGTTTTAACAAATAGA AAATGGACGGCCACCATTAAGGAACAAGAAAAGGATAGGTTGACTCCTATTGTCGAAGCA TTGAGTAATGCATATTTTGGACCTGATTACTCTCAGCCAAAGGATGCTGTTGAGATTTCT CTGAAGGATATTGACCAACTGGCTAAAACTTCTTTCCCTCTTTGTATGCGCCACATGCTA GAGAAGTTGAGAGAAAACCATCATCTGAAGCATGGGGGCAGAATGCAGTTTGGTCTTTTC CTTAAGGGAGCTGGACTAAAGTTGGAAGATGCTCTAGCATTTTGGAGGGCAGAGTTTTCT CAGAAGGTTGGCTCTGAGCGATTTGACAAGGAATATGCCTACAGTATCAGGCATAATTAT GGAAAGGAAGGAAAACGAACAGATTACACTCCGTATTCATGTCAAAAGATTATCTCTGCA ACACCTGGTGTTGGTGATCACCATGGTTGCCCTTATCGACATTTTGGTGAAGACAACTTG AGAGCAGCTCTCAATAAAATGGGAATCAGTGGTCATCCATTAGAAGAGATAATGGATAAA GTGAAGAACAGGCACTACCAGCTAGCTTGCACGATGACTTTTGAGGCAGAACATGGTGTC TCATGTGATACTGGAATCAATCATCCTAATCAGTATTTCAGTGAAAGCCAGAAAGTCTTG AAAGCAAAGAATCAAGCAGTGCAGAGCCAAGGAACAACCTAAACTGTAATGCTGCTGGCA AAAGTCAGTCCATCCAAATGCGGAATTTCAGTTCGTATCAAGATTTCATCCTTGCTGCTA ATGATATGGAGAACAACAATTACTAATCTTTATTCTGATGCCTAGATGGAATTCTATTGC TTTGCACGGTTTCAGAATTCCAACGGCTGAATATGTCATCCCCCAAAAGTGATGGATGTC CCTGTAAACATGACTTGAGCACAGAAAGTAGATAGAACCGTACAAGTACGTACTTGTCAA AACCAAAGGAAACCATGATTATGGATATCAAATTATTGTTTGTGTTGGTAAGTGGTAACT ATGTAACCATGGTAACTATGACCAGGGGGAGTTGTGAACACCTCATCAGTTAAGTTGCGC TGTAATGTTTCTGTAATCGAAAACTTGTTCGACAAAACAATTGCGCTTCCAGATATGCAA TTTCATTAATCTGCTTGAACT