Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0405100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:12424105:12440476:1 gene:Os07g0405100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-141 description:Similar to F-box-like/WD-repeat protein ebi. (Os07t0405100-01)
Sequence	ATGGGGGCAATCACCTCGGCCGAGCTCAACTTCCTCATCTTCCGGTATCTCCAGGAGTCC GGTTTCATTCATGCCGCATTCACATTAGGGTATGAAGCAGGGATCCATAAGGGTGGGATT GATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATAC ATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTT CTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAA AGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGT ATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAA AAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAA GAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTGAAGAAGATTCTCTTGCTGGT GGAGGTCCCACACCAATGGATGTAAGCACAACTGCTCATGAAATTTCTAGTGCTGATGTG ACTGTTTTGGAAGGACACAGCTCAGAGGTGTTCGCTTGTGCATGGAGTCCAGCTGGTTCC CTTCTAGCGTCTGGGTCAGGAGACTCGACAGCTAGAATCTGGACAATTCCAGATGGACCA TGTGGTTCCATCACACAATCATCTCCTCCAGGTGTTCATGTTTTGAAACATTTTAAGGGT CGAACTAATGAGAAGAGCAAGGATGTCACCACACTTGACTGGAATGGGGAAGGAACTCTA TTGGCTACTGGTTCCTATGATGGGCAGGCAAGAATATGGAATAGCGATGGAGAGTTGAAG CAGACTTTGTTCAAACACAAGGGACCTATATTTTCCTTGAAATGGAATAAGAAAGGAGAT TTCCTCCTAAGTGGAAGTGTTGATAAAACTGCTATTGTGTGGGATACAAAGACATGGGAG TGTAAGCAGCAATTTGAATTTCATTCAGCTCCAACACTGGATGTTGACTGGAGAAACAAT AATTCTTTTGCAACATGCTCAACTGATAATATGATCTATGTTTGCAAGATTGGGGATCAG CGCCCAGTTAAATCCTTCAGTGGTCATCAGAGTGAAGTTAATGCTATCAAGTGGGATCCA ACTGGTTCTCTGCTGGCTTCATGTTCAGATGATTGGACTGCTAAGATATGGAGTATGAAG CAGGATAAATGTGTTTATGATTTTAAGGAGCATACTAAGGAAATATACACTATTAGATGG AGCCCAACAGGACCAGGAACAAATAATCCCAATCAACAGTTGCTTTTGGCAAGTGCCTCT TTTGATTCGACTATCAAGCTATGGGAAGTTGAGCAAGGACGCCTTCTGTACAGCTTGGCT GGCCACAGGCAACCTGTGTATTCGGTCGCATTTAGCCCTGGTGGTGAGTACTTAGCAAGT GGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACA TACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCA GCATGTTTCTCGAACAACACAGTCTGTCTCATGGATTTCAGGATGTAG

Peptide Sequence

PEP ID	Os07t0405100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:12424105:12440476:1 gene:Os07g0405100 transcript:Os07t0405100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-141 description:Similar to F-box-like/WD-repeat protein ebi. (Os07t0405100-01)
Sequence	MGAITSAELNFLIFRYLQESGFIHAAFTLGYEAGIHKGGIDGNLVPPGALITIVQKGLQY IELEANTDENDEDLAKDFALLEPLEIITKNVEELQQIVKKRKREKTQSDRDKDKGKEKER MEEHERRPGGERERERHDQEKELEKEKDRAERDRDQDKEKEKLHTERIDKVKAEEDSLAG GGPTPMDVSTTAHEISSADVTVLEGHSSEVFACAWSPAGSLLASGSGDSTARIWTIPDGP CGSITQSSPPGVHVLKHFKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWNSDGELK QTLFKHKGPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHSAPTLDVDWRNN NSFATCSTDNMIYVCKIGDQRPVKSFSGHQSEVNAIKWDPTGSLLASCSDDWTAKIWSMK QDKCVYDFKEHTKEIYTIRWSPTGPGTNNPNQQLLLASASFDSTIKLWEVEQGRLLYSLA GHRQPVYSVAFSPGGEYLASGSLDQCLHIWSVKEGRILKTYRGSGGIFEVCWNKEGSKIA ACFSNNTVCLMDFRM

Transcript Sequence

Transcript ID	Os07t0405100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:12424105:12440476:1 gene:Os07g0405100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-141 description:Similar to F-box-like/WD-repeat protein ebi. (Os07t0405100-01)
Sequence	GTCCCCTTGGCCACTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCTCCGGAGCCTTCC CGTCTCGGCGGCGGCCACGCGTTCGTCGACCGGCGCCTATGGGGGCAATCACCTCGGCCG AGCTCAACTTCCTCATCTTCCGGTATCTCCAGGAGTCCGGTTTCATTCATGCCGCATTCA CATTAGGGTATGAAGCAGGGATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTG GTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGG ATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCA CAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAA GTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCC CTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAG ACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTA TTGATAAGGTTAAGGCTGAAGAAGATTCTCTTGCTGGTGGAGGTCCCACACCAATGGATG TAAGCACAACTGCTCATGAAATTTCTAGTGCTGATGTGACTGTTTTGGAAGGACACAGCT CAGAGGTGTTCGCTTGTGCATGGAGTCCAGCTGGTTCCCTTCTAGCGTCTGGGTCAGGAG ACTCGACAGCTAGAATCTGGACAATTCCAGATGGACCATGTGGTTCCATCACACAATCAT CTCCTCCAGGTGTTCATGTTTTGAAACATTTTAAGGGTCGAACTAATGAGAAGAGCAAGG ATGTCACCACACTTGACTGGAATGGGGAAGGAACTCTATTGGCTACTGGTTCCTATGATG GGCAGGCAAGAATATGGAATAGCGATGGAGAGTTGAAGCAGACTTTGTTCAAACACAAGG GACCTATATTTTCCTTGAAATGGAATAAGAAAGGAGATTTCCTCCTAAGTGGAAGTGTTG ATAAAACTGCTATTGTGTGGGATACAAAGACATGGGAGTGTAAGCAGCAATTTGAATTTC ATTCAGCTCCAACACTGGATGTTGACTGGAGAAACAATAATTCTTTTGCAACATGCTCAA CTGATAATATGATCTATGTTTGCAAGATTGGGGATCAGCGCCCAGTTAAATCCTTCAGTG GTCATCAGAGTGAAGTTAATGCTATCAAGTGGGATCCAACTGGTTCTCTGCTGGCTTCAT GTTCAGATGATTGGACTGCTAAGATATGGAGTATGAAGCAGGATAAATGTGTTTATGATT TTAAGGAGCATACTAAGGAAATATACACTATTAGATGGAGCCCAACAGGACCAGGAACAA ATAATCCCAATCAACAGTTGCTTTTGGCAAGTGCCTCTTTTGATTCGACTATCAAGCTAT GGGAAGTTGAGCAAGGACGCCTTCTGTACAGCTTGGCTGGCCACAGGCAACCTGTGTATT CGGTCGCATTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTAC ACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTT TTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAG TCTGTCTCATGGATTTCAGGATGTAGTTTAAACCAGTGGATGGATGAAGTAATACAAGCA GATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACT CTAGGTTTTAGGTACCTTTAGTTTGCCAGTGCTTGTACAGTTATTTCCTTGCGGAGAAAC TGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATG CTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTA CCATAACAAATGCTTAATTGCTATGGTACCATTTGACTG