Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0300900-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:11865542:11874233:-1 gene:Os07g0300900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartokinase. (Os07t0300900-01);Similar to Lysine-sensitive aspartate kinase. (Os07t0300900-02)
Sequence

ATGGCGGCGGCGGCGGCTCTCCGGTGCAACCCGCGGCCCTCTGCGGCGGTTGCTCTCCGC
GGTGCCGCCGCAGCCCCGCAGGTCGGGAATGAGGCTGCCTTCGAGCTGCTGGTCGGTGCC
ACCGAGCCTTGCCTGCGGGGCCGGAGGAGGGGTGCGGGGATTCGGTGCCAGCGAAGTGCG
GCTGCCAGCGCGGTCGTCGTCGAGAAGAAGAGTCGCGCGGTGGAGCCGGCGCGGGAGGGG
GCCAATGCCGGTCACACGGAGTCGGAGCTCACCGTGGTGATGAAGTTCGGCGGGTCGTCA
GTGGCGTCGGCCGAGCGGATGCGGGAGGTGGCCGATCTCATCCTCAGCTTCCCCGAGGAG
CGGCCGGTGATCGTACTCTCCGCCATGGGGAAGACCACCAACAAGCTTCTGATGGCTGGG
GAGAAAGCGGTGGGCTGTGGTGCAACAAATGTGTCGGAGCTTGATGAGCTCACCTTTATT
AAGGAATTGCATTTTGGGACCATTGATCAACTTGGATTGGATAGGTCAATTGTTTCCGGC
TTGTCGGATGAGCTTGAGCAACTTCTTAAGGGAATTGCTATGATGAAAGAGCTTACTCTT
AGGACAAGAGACTATCTTGTTTCCTTCGGTGAATGCATGTCAACAAGGATATTTGCGGCA
CTTTTGAATAAACTTGGGGTGAAAGCACGTCAGTATGATGCATTTGAAATAGGCTTTATA
ACCACTGATGATTTCACAAACGCTGATATTCTGGAAGCAACTTATCCTGCCATTGCAAAG
AGGCTACATGGGGACTGGGTTACTGGTCCTGCTATTCCAATAGTCACTGGTTTTCTCGGA
AAGGGATGGAAAACTGGTGCAATCACCACTTTAGGCAGGGGTGGTAGTGACCTGACAGCT
ACTACCATTGGCAAAGCCTTGGGATTAAGAGAAATCCAGGTTTGGAAAGATGTTGATGGT
GTTTTAACTTGTGATCCTAATATTCATCCAAATGCGAAACCTGTGCCATACTTGACATTT
GATGAGGCAGCTGAACTTGCCTATTTTGGTGCACAGGTTTTGCATCCACAATCGATGCGA
CCAGCTAGAGAAGGTGATATACCTGTCAGGGTTAAAAACTCTTATAACCGCCGAGCCCCT
GGTACACTCATTACTAAAGCTAGAGATATGAGTAAGACTGTTTTGACTAGTATTGTACTT
AAATCAAATATTACAATGCTTGATATAGTGAGCACACGGATGCTTGGACAATATGGTTTT
CTAGCTAAGGTCTTTTCAATTTTTGAAGATTTGGGCATCTCTGTTGATTGTGTAGCTACA
AGTGAAGTCAGCATATCTTTGACCCTGGATCCATCAAAACTCTGGAGTCGTGAATTGATC
AAGCAGGCAAATGAACTTGATCATGTCATCGAAGAACTTGAAAAGATAGCAGTTGTTCAC
CTACTGCAGCATAGATCGATAATTTCGTTAATTGGAAATGTGCAGAGGTCATCTTTGATT
CTTGAAAAGGCTTTCAACGTTTTACGTACAAATGGAGTTAATGTTCAGATGATCTCACAA
GGGGCATCCAAGGTGAACATTTCCTTGGTGGTCCATGACAGTGAGGCAAAGCAGTGCGTT
CAAGCCCTCCACTCAGCATTCTTTGAGAGTGGTTTCTTGCCAGAAGTCAATGATATTCTG
CAGGACGACTCTGTGGCACATTCCAATGGCACAGTTTACAGGCATTAG

Peptide Sequence

PEP ID

Os07t0300900-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:11865542:11874233:-1 gene:Os07g0300900 transcript:Os07t0300900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartokinase. (Os07t0300900-01);Similar to Lysine-sensitive aspartate kinase. (Os07t0300900-02)
Sequence

MAAAAALRCNPRPSAAVALRGAAAAPQVGNEAAFELLVGATEPCLRGRRRGAGIRCQRSA
AASAVVVEKKSRAVEPAREGANAGHTESELTVVMKFGGSSVASAERMREVADLILSFPEE
RPVIVLSAMGKTTNKLLMAGEKAVGCGATNVSELDELTFIKELHFGTIDQLGLDRSIVSG
LSDELEQLLKGIAMMKELTLRTRDYLVSFGECMSTRIFAALLNKLGVKARQYDAFEIGFI
TTDDFTNADILEATYPAIAKRLHGDWVTGPAIPIVTGFLGKGWKTGAITTLGRGGSDLTA
TTIGKALGLREIQVWKDVDGVLTCDPNIHPNAKPVPYLTFDEAAELAYFGAQVLHPQSMR
PAREGDIPVRVKNSYNRRAPGTLITKARDMSKTVLTSIVLKSNITMLDIVSTRMLGQYGF
LAKVFSIFEDLGISVDCVATSEVSISLTLDPSKLWSRELIKQANELDHVIEELEKIAVVH
LLQHRSIISLIGNVQRSSLILEKAFNVLRTNGVNVQMISQGASKVNISLVVHDSEAKQCV
QALHSAFFESGFLPEVNDILQDDSVAHSNGTVYRH

Transcript Sequence

Transcript ID

Os07t0300900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:11865542:11874233:-1 gene:Os07g0300900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartokinase. (Os07t0300900-01);Similar to Lysine-sensitive aspartate kinase. (Os07t0300900-02)
Sequence

CTCGCCCTCGGCCACCCGGCGCCTCCTTCCCTCCCTACTCTCTCTCCACATGGCGGCGGC
GGCGGCTCTCCGGTGCAACCCGCGGCCCTCTGCGGCGGTTGCTCTCCGCGGTGCCGCCGC
AGCCCCGCAGGTCGGGAATGAGGCTGCCTTCGAGCTGCTGGTCGGTGCCACCGAGCCTTG
CCTGCGGGGCCGGAGGAGGGGTGCGGGGATTCGGTGCCAGCGAAGTGCGGCTGCCAGCGC
GGTCGTCGTCGAGAAGAAGAGTCGCGCGGTGGAGCCGGCGCGGGAGGGGGCCAATGCCGG
TCACACGGAGTCGGAGCTCACCGTGGTGATGAAGTTCGGCGGGTCGTCAGTGGCGTCGGC
CGAGCGGATGCGGGAGGTGGCCGATCTCATCCTCAGCTTCCCCGAGGAGCGGCCGGTGAT
CGTACTCTCCGCCATGGGGAAGACCACCAACAAGCTTCTGATGGCTGGGGAGAAAGCGGT
GGGCTGTGGTGCAACAAATGTGTCGGAGCTTGATGAGCTCACCTTTATTAAGGAATTGCA
TTTTGGGACCATTGATCAACTTGGATTGGATAGGTCAATTGTTTCCGGCTTGTCGGATGA
GCTTGAGCAACTTCTTAAGGGAATTGCTATGATGAAAGAGCTTACTCTTAGGACAAGAGA
CTATCTTGTTTCCTTCGGTGAATGCATGTCAACAAGGATATTTGCGGCACTTTTGAATAA
ACTTGGGGTGAAAGCACGTCAGTATGATGCATTTGAAATAGGCTTTATAACCACTGATGA
TTTCACAAACGCTGATATTCTGGAAGCAACTTATCCTGCCATTGCAAAGAGGCTACATGG
GGACTGGGTTACTGGTCCTGCTATTCCAATAGTCACTGGTTTTCTCGGAAAGGGATGGAA
AACTGGTGCAATCACCACTTTAGGCAGGGGTGGTAGTGACCTGACAGCTACTACCATTGG
CAAAGCCTTGGGATTAAGAGAAATCCAGGTTTGGAAAGATGTTGATGGTGTTTTAACTTG
TGATCCTAATATTCATCCAAATGCGAAACCTGTGCCATACTTGACATTTGATGAGGCAGC
TGAACTTGCCTATTTTGGTGCACAGGTTTTGCATCCACAATCGATGCGACCAGCTAGAGA
AGGTGATATACCTGTCAGGGTTAAAAACTCTTATAACCGCCGAGCCCCTGGTACACTCAT
TACTAAAGCTAGAGATATGAGTAAGACTGTTTTGACTAGTATTGTACTTAAATCAAATAT
TACAATGCTTGATATAGTGAGCACACGGATGCTTGGACAATATGGTTTTCTAGCTAAGGT
CTTTTCAATTTTTGAAGATTTGGGCATCTCTGTTGATTGTGTAGCTACAAGTGAAGTCAG
CATATCTTTGACCCTGGATCCATCAAAACTCTGGAGTCGTGAATTGATCAAGCAGGCAAA
TGAACTTGATCATGTCATCGAAGAACTTGAAAAGATAGCAGTTGTTCACCTACTGCAGCA
TAGATCGATAATTTCGTTAATTGGAAATGTGCAGAGGTCATCTTTGATTCTTGAAAAGGC
TTTCAACGTTTTACGTACAAATGGAGTTAATGTTCAGATGATCTCACAAGGGGCATCCAA
GGTGAACATTTCCTTGGTGGTCCATGACAGTGAGGCAAAGCAGTGCGTTCAAGCCCTCCA
CTCAGCATTCTTTGAGAGTGGTTTCTTGCCAGAAGTCAATGATATTCTGCAGGACGACTC
TGTGGCACATTCCAATGGCACAGTTTACAGGCATTAGTCAGAAGTTTAATCCTTATGTTG
TACTGTAGTTATACCATTTGCAGCCTCAGAATCTGATCGTTCTCAGGCTAAAAACCCAAT
GTTGTAGGAGGGAAGGAGCAATTCCGGCTTTTTATAGTATTCTAGTTGGCTCTGGTTTAC
TACCAAAATGGGCATACTACCATTGTTACCATTCTTTGCAGAGCAAGTAATTGCTAGGGA
GCTAGTAGCCT