Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0299800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:11788919:11792494:-1 gene:Os07g0299800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0299800-01)
Sequence	ATGGCGGGAGCAAGCGTCATGACATCGCTCCCAAATCCACTCCCCACGCCGCCTGCCCAC CCATCTCCCGCGTTCAATCCCCAACGCCAACGAGAGCGCAGCGTCCCGAGTCCGACCACC ACCGCCTCCTCCCTCCGCGCGCTCTTCCTCCGCGCCGTCGACCCGTCGCGCCCCGCGTCC TGGTCCGCGGCCGTCGCAGACCTCCTCTCCTCCGGCGACGCGGTCGCCGCCCTCGCCACG TTCGCCGCCGCCGTCCGCGCCAACCCCGCCGCGCTCCGCCCGGCTCTGCCCCCGGCCCTC CGCGCGGCCGCCGCCGCCAGGTCCCTCGCCGCCGGTCGCCAGCTGCATCTCCTCGCCCTC CGCTCGGGCCTGTTCCCCTCCGACCCGTATTCCGCCTCCGCCCTCCTCCACATGTACCAC CACTGTTCCCGTCCCATGGACGCCCGCAGGGCGTTCGACGAAATCCCTGACCCCAACCCC GTCATCGTCACCGCTATGGCATCTGGCTACGTACGCAACAATCTAGTCTACCACTCGCTC GAACTCTTCCGTGCCATGATAGCCTCCGATTCTGCTTCTGTGGTCGACGAGGCTGCCGCT CTGGTGGCGTTCTCTGCTTCCGCCCGTGTCCCTGACCGTGGTGTTACTGCCAGCCTCCAC GCGCTTATTGCAAAGATTGGCTTCGAAAGGAATGCTGGGGTGGTAAACACGATGCTAGAC TCGTACGCTAAGGGTGGCAGTCGTGACTTGGAGGTAGCCAGGAAAGTGTTTGATACAATG GAAAGGGATGTGGTGTCCTGGAATTCGATGATTGCTCTGTACGCACAGAATGGGATGTCA GCCGAAGCAATTGGGTTGTATAGCAAGATGCTGAATGTTGGCGGAGGAATCAAATGCAAC GCTGTGGCATTGTCGGCTGTGCTACTGGCTTGTGCGCATGCAGGGGCAATACAGACAGGA AAGCGCATTCATAATCAGGTGGTAAGGATGGGTTTGGAGGAAAATGTCTATGTTGGTACT TCCATAGTTGATATGTACAGTAAGTGTGGAAGAGTTGAAATGGCAAGTAGGGCCTTCCGA AAAATCAAGGAAAAGAACATCCTTTCATGGTCTGCCATGATTACTGGTTATGGCATGCAT GGTCGCGGACAAGAAGCCCTTGAGATTTTCACCGAGATGAAAAGATCAGGTCTAAGGCCT AACTACATAACGTTTATCTCAGTTTTAGCCGCTTGCAGTCATGCTGGTCTTTTGGATGAG GGCCGATATTGGTACAATGCCATGAAGCAAGAATTTGGTATTGAAGCTGGTGTGGAGCAC TACGGTTGCATGGTGGATCTCCTTGGTCGTGCTGGTTGTCTTGATGAAGCTTATAGTCTC ATTAAAGAAATGAAGGTCAAACCCGATGCTGCTATATGGGGAGCTCTTCTTAGTGCATGC CGCATACACAAAAATGTTGAGCTTGCAGAAATGTCTGTAAAAAGATTGTTTGAATTGGAT GCAAGCAATAGTGGATACTATGTTCTGTTGTCTAATATATATGCAGAGGCTAGAATGTGG AAAGATGTGGAACGGATAAGGCTTCTGGTCAAAACAAGAAGAATAGAAAAGCCTCCTGGG TATAGCTCTTTTGAGTTGAAAGGTAAAATCTATTTGTTTTATGTTGGCGACAAGAGTCAC CCACAGCACATTGAAATCTATTCTTATTTGGAGAAACTGCTTGAAAGAATGCAAGAAGCA GGCTATGTACCAAACACGGGTTCTGTTCTTCATGATTTGGATGAAGAAGAGAAAGAGTCT GCATTGCGAATCCATAGTGAAAAGCTTGCTGTTGCTTTTGCTCTAATGAATTCAGTCCCA AGATCAGTGATCCATATAATAAAGAATCTCCGGGTCTGTAGTGATTGCCATACAGCAATG AAGTTCATTACCAAGATCACTGAAAGAGAAATCATCATCAGAGATTTACAGCGCTTCCAT CACTTCAAAGATGGATTATGCTCTTGTCGGGATTACTGGTGA

Peptide Sequence

PEP ID	Os07t0299800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:11788919:11792494:-1 gene:Os07g0299800 transcript:Os07t0299800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0299800-01)
Sequence	MAGASVMTSLPNPLPTPPAHPSPAFNPQRQRERSVPSPTTTASSLRALFLRAVDPSRPAS WSAAVADLLSSGDAVAALATFAAAVRANPAALRPALPPALRAAAAARSLAAGRQLHLLAL RSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSL ELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLD SYAKGGSRDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCN AVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFR KIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDE GRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSAC RIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPG YSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKES ALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFH HFKDGLCSCRDYW

Transcript Sequence

Transcript ID	Os07t0299800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:11788919:11792494:-1 gene:Os07g0299800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0299800-01)
Sequence	GAGTGCGAGAGCGACGACGGCGGCCGAATACGAGCAGCCGCAGCGGCGGTGGCACGCGAG CAGTGGCGACTGACTGGCTGTGGCTCGGCAATGGCGGGAGCAAGCGTCATGACATCGCTC CCAAATCCACTCCCCACGCCGCCTGCCCACCCATCTCCCGCGTTCAATCCCCAACGCCAA CGAGAGCGCAGCGTCCCGAGTCCGACCACCACCGCCTCCTCCCTCCGCGCGCTCTTCCTC CGCGCCGTCGACCCGTCGCGCCCCGCGTCCTGGTCCGCGGCCGTCGCAGACCTCCTCTCC TCCGGCGACGCGGTCGCCGCCCTCGCCACGTTCGCCGCCGCCGTCCGCGCCAACCCCGCC GCGCTCCGCCCGGCTCTGCCCCCGGCCCTCCGCGCGGCCGCCGCCGCCAGGTCCCTCGCC GCCGGTCGCCAGCTGCATCTCCTCGCCCTCCGCTCGGGCCTGTTCCCCTCCGACCCGTAT TCCGCCTCCGCCCTCCTCCACATGTACCACCACTGTTCCCGTCCCATGGACGCCCGCAGG GCGTTCGACGAAATCCCTGACCCCAACCCCGTCATCGTCACCGCTATGGCATCTGGCTAC GTACGCAACAATCTAGTCTACCACTCGCTCGAACTCTTCCGTGCCATGATAGCCTCCGAT TCTGCTTCTGTGGTCGACGAGGCTGCCGCTCTGGTGGCGTTCTCTGCTTCCGCCCGTGTC CCTGACCGTGGTGTTACTGCCAGCCTCCACGCGCTTATTGCAAAGATTGGCTTCGAAAGG AATGCTGGGGTGGTAAACACGATGCTAGACTCGTACGCTAAGGGTGGCAGTCGTGACTTG GAGGTAGCCAGGAAAGTGTTTGATACAATGGAAAGGGATGTGGTGTCCTGGAATTCGATG ATTGCTCTGTACGCACAGAATGGGATGTCAGCCGAAGCAATTGGGTTGTATAGCAAGATG CTGAATGTTGGCGGAGGAATCAAATGCAACGCTGTGGCATTGTCGGCTGTGCTACTGGCT TGTGCGCATGCAGGGGCAATACAGACAGGAAAGCGCATTCATAATCAGGTGGTAAGGATG GGTTTGGAGGAAAATGTCTATGTTGGTACTTCCATAGTTGATATGTACAGTAAGTGTGGA AGAGTTGAAATGGCAAGTAGGGCCTTCCGAAAAATCAAGGAAAAGAACATCCTTTCATGG TCTGCCATGATTACTGGTTATGGCATGCATGGTCGCGGACAAGAAGCCCTTGAGATTTTC ACCGAGATGAAAAGATCAGGTCTAAGGCCTAACTACATAACGTTTATCTCAGTTTTAGCC GCTTGCAGTCATGCTGGTCTTTTGGATGAGGGCCGATATTGGTACAATGCCATGAAGCAA GAATTTGGTATTGAAGCTGGTGTGGAGCACTACGGTTGCATGGTGGATCTCCTTGGTCGT GCTGGTTGTCTTGATGAAGCTTATAGTCTCATTAAAGAAATGAAGGTCAAACCCGATGCT GCTATATGGGGAGCTCTTCTTAGTGCATGCCGCATACACAAAAATGTTGAGCTTGCAGAA ATGTCTGTAAAAAGATTGTTTGAATTGGATGCAAGCAATAGTGGATACTATGTTCTGTTG TCTAATATATATGCAGAGGCTAGAATGTGGAAAGATGTGGAACGGATAAGGCTTCTGGTC AAAACAAGAAGAATAGAAAAGCCTCCTGGGTATAGCTCTTTTGAGTTGAAAGGTAAAATC TATTTGTTTTATGTTGGCGACAAGAGTCACCCACAGCACATTGAAATCTATTCTTATTTG GAGAAACTGCTTGAAAGAATGCAAGAAGCAGGCTATGTACCAAACACGGGTTCTGTTCTT CATGATTTGGATGAAGAAGAGAAAGAGTCTGCATTGCGAATCCATAGTGAAAAGCTTGCT GTTGCTTTTGCTCTAATGAATTCAGTCCCAAGATCAGTGATCCATATAATAAAGAATCTC CGGGTCTGTAGTGATTGCCATACAGCAATGAAGTTCATTACCAAGATCACTGAAAGAGAA ATCATCATCAGAGATTTACAGCGCTTCCATCACTTCAAAGATGGATTATGCTCTTGTCGG GATTACTGGTGACAATGTACCAAAGGGCTTAGGTTCTGATGACATCTTTGTAGTCATAAT GTCACGTTTTGATCTTTATAGCTAACATCCCTTTAAGATAGTGATGCTGTAATGTCACTG GATTAAGGGTAATGGCAGTGTCTCACTTCATTGCTTGCTAGAAGCCTAGAACAGCCCGAA ACTATCTGCGCTGGTGTAACTGTAAGTTGGCGAATTTTTTGGTGCCTTTTCTTTTACTGA ATGAACGTACTACTTGTACCTTCCAATACAAGAATGTCAGTCATGATATGACTGATGCAT C